RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.45
CUL3-207ENST00000451538 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
CUL3-207ENST00000451538 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
CUL3-207ENST00000451538 SOX11P35716 441 aa12.19□□□□□ -0.46
CUL3-207ENST00000451538 PDE4CQ08493 712 aa12.18□□□□□ -0.46
CUL3-207ENST00000451538 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
CUL3-207ENST00000451538 DESI1Q6ICB0 168 aa12.18□□□□□ -0.46
CUL3-207ENST00000451538 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
CUL3-207ENST00000451538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.17□□□□□ -0.46
CUL3-207ENST00000451538 RNF19BQ6ZMZ0 732 aa12.17□□□□□ -0.46
CUL3-207ENST00000451538 PPP1R12CQ9BZL4 782 aa12.17□□□□□ -0.46
CUL3-207ENST00000451538 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
CUL3-207ENST00000451538 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
CUL3-207ENST00000451538 ALG2Q9H553 416 aa12.16□□□□□ -0.46
CUL3-207ENST00000451538 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
CUL3-207ENST00000451538 BLOC1S3Q6QNY0 202 aa12.15□□□□□ -0.46
CUL3-207ENST00000451538 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
CUL3-207ENST00000451538 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
CUL3-207ENST00000451538 LYPD8Q6UX82 237 aa12.14□□□□□ -0.47
CUL3-207ENST00000451538 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
CUL3-207ENST00000451538 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
CUL3-207ENST00000451538 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
CUL3-207ENST00000451538 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
CUL3-207ENST00000451538 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
CUL3-207ENST00000451538 APLP1P51693 650 aa12.13□□□□□ -0.47
CUL3-207ENST00000451538 NR1I2O75469 434 aa12.12□□□□□ -0.47
CUL3-207ENST00000451538 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
CUL3-207ENST00000451538 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
CUL3-207ENST00000451538 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
CUL3-207ENST00000451538 NR1H3Q13133 447 aa12.09□□□□□ -0.47
CUL3-207ENST00000451538 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
CUL3-207ENST00000451538 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
CUL3-207ENST00000451538 GGCXP38435 758 aa12.08□□□□□ -0.48
CUL3-207ENST00000451538 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
CUL3-207ENST00000451538 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
CUL3-207ENST00000451538 FKBPLQ9UIM3 349 aa12.08□□□□□ -0.48
CUL3-207ENST00000451538 JUNDP17535 347 aa12.07□□□□□ -0.48
CUL3-207ENST00000451538 CTHP32929 405 aa12.07□□□□□ -0.48
CUL3-207ENST00000451538 MAP10Q9P2G4 905 aa12.07□□□□□ -0.48
CUL3-207ENST00000451538 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
CUL3-207ENST00000451538 USTQ9Y2C2 406 aa12.07□□□□□ -0.48
CUL3-207ENST00000451538 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
CUL3-207ENST00000451538 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
CUL3-207ENST00000451538 PTPRNQ16849 979 aa12.06□□□□□ -0.48
CUL3-207ENST00000451538 MAFBQ9Y5Q3 323 aaPredicted RBP12.05□□□□□ -0.48
CUL3-207ENST00000451538 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
CUL3-207ENST00000451538 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
CUL3-207ENST00000451538 COPS2P61201 443 aa12.03□□□□□ -0.48
CUL3-207ENST00000451538 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
CUL3-207ENST00000451538 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
CUL3-207ENST00000451538 THAP11Q96EK4 314 aa12.03□□□□□ -0.48
CUL3-207ENST00000451538 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
CUL3-207ENST00000451538 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
CUL3-207ENST00000451538 ATP9BO43861 1147 aa12.02□□□□□ -0.49
CUL3-207ENST00000451538 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
CUL3-207ENST00000451538 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
CUL3-207ENST00000451538 ZPR1O75312 459 aa12□□□□□ -0.49
CUL3-207ENST00000451538 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
CUL3-207ENST00000451538 TMCO4Q5TGY1 634 aa11.99□□□□□ -0.49
CUL3-207ENST00000451538 SPSB2Q99619 263 aa11.99□□□□□ -0.49
CUL3-207ENST00000451538 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
CUL3-207ENST00000451538 GZF1Q9H116 711 aaPredicted RBP11.99□□□□□ -0.49
CUL3-207ENST00000451538 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
CUL3-207ENST00000451538 ARMC2Q8NEN0 867 aa11.98□□□□□ -0.49
CUL3-207ENST00000451538 ATG7O95352 703 aa11.97□□□□□ -0.49
CUL3-207ENST00000451538 BRD1O95696 1058 aa11.97□□□□□ -0.49
CUL3-207ENST00000451538 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
CUL3-207ENST00000451538 CARNS1A5YM72 827 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 SKIP12755 728 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 PTK2Q05397 1052 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 KCNA1Q09470 495 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 ZNF592Q92610 1267 aa11.96□□□□□ -0.49
CUL3-207ENST00000451538 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
CUL3-207ENST00000451538 PRDM9Q9NQV7 894 aa11.95□□□□□ -0.5
CUL3-207ENST00000451538 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
CUL3-207ENST00000451538 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
CUL3-207ENST00000451538 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 SLFNL1Q499Z3 407 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 NFATC2IPQ8NCF5 419 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.55e-7■■□□□ 13
CUL3-207ENST00000451538 EVA1BQ9NVM1 165 aa11.93□□□□□ -0.5
CUL3-207ENST00000451538 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
CUL3-207ENST00000451538 FAM160A2Q8N612 972 aaPredicted RBP11.92□□□□□ -0.5
CUL3-207ENST00000451538 GPSM3Q9Y4H4 160 aa11.92□□□□□ -0.5
CUL3-207ENST00000451538 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
CUL3-207ENST00000451538 TLL1O43897 1013 aa11.91□□□□□ -0.5
CUL3-207ENST00000451538 SLC19A1P41440 591 aa11.91□□□□□ -0.5
CUL3-207ENST00000451538 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
CUL3-207ENST00000451538 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
CUL3-207ENST00000451538 ZNF775Q96BV0 537 aaPredicted RBP11.91□□□□□ -0.5
CUL3-207ENST00000451538 MMP16P51512 607 aa11.9□□□□□ -0.5
CUL3-207ENST00000451538 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
CUL3-207ENST00000451538 ADH1BP00325 375 aa11.89□□□□□ -0.51
CUL3-207ENST00000451538 RNF135Q8IUD6 432 aa11.89□□□□□ -0.51
CUL3-207ENST00000451538 DEPDC4Q8N2C3 294 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms