RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
DDX39B-211ENST00000449757 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
DDX39B-211ENST00000449757 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
DDX39B-211ENST00000449757 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
DDX39B-211ENST00000449757 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
DDX39B-211ENST00000449757 BAG6P46379 1132 aa15.15■□□□□ 0.02
DDX39B-211ENST00000449757 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
DDX39B-211ENST00000449757 PSDA5PKW4 1024 aaPredicted RBP15.14■□□□□ 0.01
DDX39B-211ENST00000449757 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
DDX39B-211ENST00000449757 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
DDX39B-211ENST00000449757 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
DDX39B-211ENST00000449757 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
DDX39B-211ENST00000449757 ONECUT3O60422 494 aaPredicted RBP15.12■□□□□ 0.01
DDX39B-211ENST00000449757 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
DDX39B-211ENST00000449757 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
DDX39B-211ENST00000449757 FAM182BQ5T319 152 aa15.11■□□□□ 0.01
DDX39B-211ENST00000449757 ATP7BP35670 1465 aa15.1■□□□□ 0.01
DDX39B-211ENST00000449757 SPATA31A5Q5VU36 1347 aa15.1■□□□□ 0.01
DDX39B-211ENST00000449757 SPATA31A7Q8IWB4 1347 aa15.1■□□□□ 0.01
DDX39B-211ENST00000449757 TOPAZ1Q8N9V7 1692 aa15.09■□□□□ 0.01
DDX39B-211ENST00000449757 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
DDX39B-211ENST00000449757 STRN4Q9NRL3 753 aa15.08■□□□□ 0
DDX39B-211ENST00000449757 KIAA0232Q92628 1395 aa15.08■□□□□ 0
DDX39B-211ENST00000449757 CHRNA2Q15822 529 aa15.07■□□□□ 0
DDX39B-211ENST00000449757 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
DDX39B-211ENST00000449757 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
DDX39B-211ENST00000449757 HRCP23327 699 aa15.05■□□□□ -0
DDX39B-211ENST00000449757 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
DDX39B-211ENST00000449757 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
DDX39B-211ENST00000449757 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
DDX39B-211ENST00000449757 USP35Q9P2H5 1018 aa15.04■□□□□ -0
DDX39B-211ENST00000449757 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
DDX39B-211ENST00000449757 SPATA31A1Q5TZJ5 1347 aa15.03■□□□□ -0
DDX39B-211ENST00000449757 DISP2A7MBM2 1401 aa15.02■□□□□ -0
DDX39B-211ENST00000449757 CDK19Q9BWU1 502 aa15.02■□□□□ -0
DDX39B-211ENST00000449757 RREB1Q92766 1687 aa15.02□□□□□ -0.01
DDX39B-211ENST00000449757 TRIM37O94972 964 aa15.01□□□□□ -0.01
DDX39B-211ENST00000449757 EVA1CP58658 441 aa15.01□□□□□ -0.01
DDX39B-211ENST00000449757 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
DDX39B-211ENST00000449757 SSH2Q76I76 1423 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 ACEP12821 1306 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 STAC3Q96MF2 364 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
DDX39B-211ENST00000449757 PDE3BQ13370 1112 aa14.99□□□□□ -0.01
DDX39B-211ENST00000449757 LMO7Q8WWI1 1683 aa14.99□□□□□ -0.01
DDX39B-211ENST00000449757 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
DDX39B-211ENST00000449757 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
DDX39B-211ENST00000449757 APBA3O96018 575 aa14.98□□□□□ -0.01
DDX39B-211ENST00000449757 ABTB2Q8N961 1025 aa14.98□□□□□ -0.01
DDX39B-211ENST00000449757 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
DDX39B-211ENST00000449757 PARP4Q9UKK3 1724 aaKnown RBP14.97□□□□□ -0.01
DDX39B-211ENST00000449757 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
DDX39B-211ENST00000449757 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
DDX39B-211ENST00000449757 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
DDX39B-211ENST00000449757 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
DDX39B-211ENST00000449757 LARP1Q6PKG0 1096 aaKnown RBP14.95□□□□□ -0.02
DDX39B-211ENST00000449757 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
DDX39B-211ENST00000449757 PARD3Q8TEW0 1356 aa14.95□□□□□ -0.02
DDX39B-211ENST00000449757 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
DDX39B-211ENST00000449757 BARGINQ6ZT62 677 aa14.94□□□□□ -0.02
DDX39B-211ENST00000449757 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
DDX39B-211ENST00000449757 CPDO75976 1380 aa14.93□□□□□ -0.02
DDX39B-211ENST00000449757 COL5A2P05997 1499 aaPredicted RBP14.93□□□□□ -0.02
DDX39B-211ENST00000449757 USP19O94966 1318 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
DDX39B-211ENST00000449757 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 AKAP12Q02952 1782 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 SBF2Q86WG5 1849 aa14.92□□□□□ -0.02
DDX39B-211ENST00000449757 NBPF1Q3BBV0 1214 aa14.91□□□□□ -0.02
DDX39B-211ENST00000449757 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
DDX39B-211ENST00000449757 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
DDX39B-211ENST00000449757 RGPD5Q99666 1765 aa14.9□□□□□ -0.02
DDX39B-211ENST00000449757 CRB1P82279 1406 aa14.9□□□□□ -0.02
DDX39B-211ENST00000449757 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
DDX39B-211ENST00000449757 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 GCP02774 474 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 THRAP3Q9Y2W1 955 aaKnown RBP14.89□□□□□ -0.03
DDX39B-211ENST00000449757 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 OVOS2A0A0J9YW53 1432 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 OVOS2Q6IE36 1432 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
DDX39B-211ENST00000449757 SLIT3O75094 1523 aa14.88□□□□□ -0.03
DDX39B-211ENST00000449757 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
DDX39B-211ENST00000449757 USP6P35125 1406 aa14.88□□□□□ -0.03
DDX39B-211ENST00000449757 NLRP6P59044 892 aa14.87□□□□□ -0.03
DDX39B-211ENST00000449757 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
DDX39B-211ENST00000449757 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
DDX39B-211ENST00000449757 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
DDX39B-211ENST00000449757 COL18A1P39060 1754 aa14.85□□□□□ -0.03
DDX39B-211ENST00000449757 CABP1Q9NZU7 370 aa14.85□□□□□ -0.03
DDX39B-211ENST00000449757 SOX12O15370 315 aa14.84□□□□□ -0.03
DDX39B-211ENST00000449757 DDB1Q16531 1140 aa14.84□□□□□ -0.03
DDX39B-211ENST00000449757 C11orf95C9JLR9 678 aaPredicted RBP14.83□□□□□ -0.04
DDX39B-211ENST00000449757 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
DDX39B-211ENST00000449757 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms