RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	USP35	Q9P2H5	1018 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	KIF1B	O60333	1816 aa		10.93	□□□□□ -0.66
HDLBP-222	ENST00000449504	ADGRB2	O60241	1585 aa		10.92	□□□□□ -0.66
HDLBP-222	ENST00000449504	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
HDLBP-222	ENST00000449504	RGL3	Q3MIN7	710 aa		10.92	□□□□□ -0.66
HDLBP-222	ENST00000449504	PRDM11	Q9NQV5	511 aa		10.92	□□□□□ -0.66
HDLBP-222	ENST00000449504	CAMTA1	Q9Y6Y1	1673 aa		10.92	□□□□□ -0.66
HDLBP-222	ENST00000449504	NRAP	Q86VF7	1730 aa		10.91	□□□□□ -0.66
HDLBP-222	ENST00000449504	ABCC11	Q96J66	1382 aa		10.9	□□□□□ -0.66
HDLBP-222	ENST00000449504	SPATA31A1	Q5TZJ5	1347 aa		10.9	□□□□□ -0.66
HDLBP-222	ENST00000449504	FMN2	Q9NZ56	1722 aa		10.9	□□□□□ -0.66
HDLBP-222	ENST00000449504	CHRNA2	Q15822	529 aa		10.9	□□□□□ -0.66
HDLBP-222	ENST00000449504	PAK3	O75914	559 aa	Predicted RBP	10.89	□□□□□ -0.67
HDLBP-222	ENST00000449504	ZBTB7A	O95365	584 aa		10.89	□□□□□ -0.67
HDLBP-222	ENST00000449504	TECPR2	O15040	1411 aa		10.89	□□□□□ -0.67
HDLBP-222	ENST00000449504	ABCA3	Q99758	1704 aa		10.89	□□□□□ -0.67
HDLBP-222	ENST00000449504	NRXN1	Q9ULB1	1477 aa		10.88	□□□□□ -0.67
HDLBP-222	ENST00000449504	EVA1C	P58658	441 aa		10.88	□□□□□ -0.67
HDLBP-222	ENST00000449504	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.88	□□□□□ -0.67
HDLBP-222	ENST00000449504	THSD7A	Q9UPZ6	1657 aa		10.88	□□□□□ -0.67
HDLBP-222	ENST00000449504	COL14A1	Q05707	1796 aa	Known RBP	10.88	□□□□□ -0.67
HDLBP-222	ENST00000449504	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.87	□□□□□ -0.67
HDLBP-222	ENST00000449504	GPRASP1	Q5JY77	1395 aa		10.87	□□□□□ -0.67
HDLBP-222	ENST00000449504	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	RRBP1	Q9P2E9	1410 aa	Known RBP	10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	RGPD8	O14715	1765 aa	Predicted RBP	10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	ZC3H6	P61129	1189 aa	Known RBP	10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	PRAM1	Q96QH2	718 aa		10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	NUP188	Q5SRE5	1749 aa		10.86	□□□□□ -0.67
HDLBP-222	ENST00000449504	PPL	O60437	1756 aa		10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	SIRT1	Q96EB6	747 aa		10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	POGK	Q9P215	609 aa		10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	KIAA0232	Q92628	1395 aa		10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	RREB1	Q92766	1687 aa		10.85	□□□□□ -0.67
HDLBP-222	ENST00000449504	GIGYF1	O75420	1035 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	NGDN	Q8NEJ9	315 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	SYT17	Q9BSW7	474 aa		10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	ACIN1	Q9UKV3	1341 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-222	ENST00000449504	NRK	Q7Z2Y5	1582 aa		10.83	□□□□□ -0.68
HDLBP-222	ENST00000449504	PTGER2	P43116	358 aa		10.83	□□□□□ -0.68
HDLBP-222	ENST00000449504	NUTM2G	Q5VZR2	741 aa		10.83	□□□□□ -0.68
HDLBP-222	ENST00000449504	BARGIN	Q6ZT62	677 aa		10.83	□□□□□ -0.68
HDLBP-222	ENST00000449504	LARP1	Q6PKG0	1096 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-222	ENST00000449504	TCP11L2	Q8N4U5	519 aa		10.82	□□□□□ -0.68
HDLBP-222	ENST00000449504	IFT172	Q9UG01	1749 aa		10.81	□□□□□ -0.68
HDLBP-222	ENST00000449504	DHX57	Q6P158	1386 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-222	ENST00000449504	ANKRD30B	Q9BXX2	1392 aa		10.81	□□□□□ -0.68
HDLBP-222	ENST00000449504	CFAP70	Q5T0N1	1121 aa		10.81	□□□□□ -0.68
HDLBP-222	ENST00000449504	PLSCR1	O15162	318 aa		10.8	□□□□□ -0.68
HDLBP-222	ENST00000449504	GPR162	Q16538	588 aa		10.8	□□□□□ -0.68
HDLBP-222	ENST00000449504	C14orf93	Q9H972	538 aa	Known RBP	10.8	□□□□□ -0.68
HDLBP-222	ENST00000449504	KNDC1	Q76NI1	1749 aa		10.8	□□□□□ -0.68
HDLBP-222	ENST00000449504	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-222	ENST00000449504	SSH2	Q76I76	1423 aa		10.79	□□□□□ -0.68
HDLBP-222	ENST00000449504	ANKAR	Q7Z5J8	1434 aa		10.79	□□□□□ -0.68
HDLBP-222	ENST00000449504	PTF1A	Q7RTS3	328 aa		10.79	□□□□□ -0.68
HDLBP-222	ENST00000449504	STK32B	Q9NY57	414 aa		10.79	□□□□□ -0.68
HDLBP-222	ENST00000449504	PRR36	Q9H6K5	1346 aa		10.79	□□□□□ -0.68
HDLBP-222	ENST00000449504	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	PIK3C2G	O75747	1445 aa		10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	PELP1	Q8IZL8	1130 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	PROM2	Q8N271	834 aa		10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	MYOM1	P52179	1685 aa		10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	ALS2	Q96Q42	1657 aa		10.78	□□□□□ -0.68
HDLBP-222	ENST00000449504	ZBTB7C	A1YPR0	619 aa		10.77	□□□□□ -0.69
HDLBP-222	ENST00000449504	C11orf95	C9JLR9	678 aa	Predicted RBP	10.77	□□□□□ -0.69
HDLBP-222	ENST00000449504	KLHL34	Q8N239	644 aa		10.77	□□□□□ -0.69
HDLBP-222	ENST00000449504	TRAK1	Q9UPV9	953 aa		10.77	□□□□□ -0.69
HDLBP-222	ENST00000449504	SLC15A2	Q16348	729 aa		10.76	□□□□□ -0.69
HDLBP-222	ENST00000449504	ARX	Q96QS3	562 aa		10.76	□□□□□ -0.69
HDLBP-222	ENST00000449504	MTFR1L	Q9H019	292 aa		10.76	□□□□□ -0.69
HDLBP-222	ENST00000449504	THRAP3	Q9Y2W1	955 aa	Known RBP	10.76	□□□□□ -0.69
HDLBP-222	ENST00000449504	SPATA31E1	Q6ZUB1	1445 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	CASZ1	Q86V15	1759 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	WASL	O00401	505 aa	Predicted RBP	10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	DDB1	Q16531	1140 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	TXNRD1	Q16881	649 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	OVOS2	A0A0G2JMS6	1433 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	OVOS2	A0A0J9YW53	1432 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	OVOS2	Q6IE36	1432 aa		10.75	□□□□□ -0.69
HDLBP-222	ENST00000449504	EIF3A	Q14152	1382 aa	Known RBP	10.74	□□□□□ -0.69
HDLBP-222	ENST00000449504	ABTB2	Q8N961	1025 aa		10.73	□□□□□ -0.69
HDLBP-222	ENST00000449504	SGIP1	Q9BQI5	828 aa		10.73	□□□□□ -0.69
HDLBP-222	ENST00000449504	CRYBG1	Q9Y4K1	1723 aa		10.72	□□□□□ -0.69
HDLBP-222	ENST00000449504	NUDT16	Q96DE0	195 aa	Known RBP	10.72	□□□□□ -0.69
HDLBP-222	ENST00000449504	DLC1	Q96QB1	1528 aa		10.72	□□□□□ -0.69
HDLBP-222	ENST00000449504	CHD4	Q14839	1912 aa		10.71	□□□□□ -0.69
HDLBP-222	ENST00000449504	TOM1L2	Q6ZVM7	507 aa		10.71	□□□□□ -0.69
HDLBP-222	ENST00000449504	TULP4	Q9NRJ4	1543 aa		10.7	□□□□□ -0.7
HDLBP-222	ENST00000449504	MARCH10	Q8NA82	808 aa	Predicted RBP	10.7	□□□□□ -0.7
HDLBP-222	ENST00000449504	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.69	□□□□□ -0.7
HDLBP-222	ENST00000449504	GC	P02774	474 aa		10.69	□□□□□ -0.7
HDLBP-222	ENST00000449504	MPHOSPH9	Q99550	1183 aa		10.69	□□□□□ -0.7
HDLBP-222	ENST00000449504	CRB1	P82279	1406 aa		10.68	□□□□□ -0.7

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