RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 QPCTQ16769 361 aa6.02□□□□□ -1.45
PMS1-216ENST00000447734 NUTM1Q86Y26 1132 aa6.02□□□□□ -1.45
PMS1-216ENST00000447734 SLF2Q8IX21 1173 aa6.02□□□□□ -1.45
PMS1-216ENST00000447734 CDK11BP21127 795 aaKnown RBP6.01□□□□□ -1.45
PMS1-216ENST00000447734 LMOD1P29536 600 aaPredicted RBP6.01□□□□□ -1.45
PMS1-216ENST00000447734 PKDCCQ504Y2 493 aa6.01□□□□□ -1.45
PMS1-216ENST00000447734 ZNF598Q86UK7 904 aaKnown RBP6.01□□□□□ -1.45
PMS1-216ENST00000447734 CDK11AQ9UQ88 783 aaPredicted RBP6.01□□□□□ -1.45
PMS1-216ENST00000447734 PALM3A6NDB9 673 aaPredicted RBP6□□□□□ -1.45
PMS1-216ENST00000447734 NUTM2BA6NNL0 878 aaPredicted RBP6□□□□□ -1.45
PMS1-216ENST00000447734 NUTM2EB1AL46 878 aaPredicted RBP6□□□□□ -1.45
PMS1-216ENST00000447734 LILRB3O75022 631 aa6□□□□□ -1.45
PMS1-216ENST00000447734 HDGFP51858 240 aaKnown RBP6□□□□□ -1.45
PMS1-216ENST00000447734 PLA2G2CQ5R387 149 aa6□□□□□ -1.45
PMS1-216ENST00000447734 NUTM2DQ5VT03 806 aaPredicted RBP6□□□□□ -1.45
PMS1-216ENST00000447734 B4GALNT3Q6L9W6 998 aa6□□□□□ -1.45
PMS1-216ENST00000447734 NUTM2AQ8IVF1 878 aaPredicted RBP6□□□□□ -1.45
PMS1-216ENST00000447734 RBM46Q8TBY0 533 aaKnown RBP6□□□□□ -1.45
PMS1-216ENST00000447734 PCDHB3Q9Y5E6 796 aa6□□□□□ -1.45
PMS1-216ENST00000447734 MOXD2PA6NHM9 499 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 ST8SIA5O15466 376 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 ATG7O95352 703 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 CD46P15529 392 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 RTL5Q5HYW3 569 aaPredicted RBP5.99□□□□□ -1.45
PMS1-216ENST00000447734 RSPH4AQ5TD94 716 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 ANKLE1Q8NAG6 615 aa5.99□□□□□ -1.45
PMS1-216ENST00000447734 GJD4Q96KN9 370 aaPredicted RBP5.99□□□□□ -1.45
PMS1-216ENST00000447734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.98□□□□□ -1.45
PMS1-216ENST00000447734 UNCXA6NJT0 531 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 TMEM88BA6NKF7 163 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 TNFRSF10AO00220 468 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 S1PR4O95977 384 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 GJA5P36382 358 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 VAC14Q08AM6 782 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 ZNF697Q5TEC3 545 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 TREML4Q6UXN2 200 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 SULF1Q8IWU6 871 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
PMS1-216ENST00000447734 AAASQ9NRG9 546 aa5.98□□□□□ -1.45
PMS1-216ENST00000447734 FAM187AA6NFU0 413 aa5.97□□□□□ -1.45
PMS1-216ENST00000447734 NDUFV2P19404 249 aa5.97□□□□□ -1.45
PMS1-216ENST00000447734 CDCA8Q53HL2 280 aa5.97□□□□□ -1.45
PMS1-216ENST00000447734 TFIP11Q9UBB9 837 aaKnown RBP5.97□□□□□ -1.45
PMS1-216ENST00000447734 GNEQ9Y223 722 aaKnown RBP5.97□□□□□ -1.45
PMS1-216ENST00000447734 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
PMS1-216ENST00000447734 RBM47A0AV96 593 aaKnown RBP5.96□□□□□ -1.46
PMS1-216ENST00000447734 PRPF38BQ5VTL8 546 aaKnown RBP5.96□□□□□ -1.46
PMS1-216ENST00000447734 CABLES1Q8TDN4 633 aa5.96□□□□□ -1.46
PMS1-216ENST00000447734 ALG2Q9H553 416 aa5.96□□□□□ -1.46
PMS1-216ENST00000447734 DACH1Q9UI36 760 aa5.96□□□□□ -1.46
PMS1-216ENST00000447734 RCCD1A6NED2 376 aa5.95□□□□□ -1.46
PMS1-216ENST00000447734 DDX11L8A8MPP1 907 aa5.95□□□□□ -1.46
PMS1-216ENST00000447734 UCN2Q96RP3 112 aa5.95□□□□□ -1.46
PMS1-216ENST00000447734 ZBTB3Q9H5J0 574 aa5.95□□□□□ -1.46
PMS1-216ENST00000447734 PKD2L1Q9P0L9 805 aa5.95□□□□□ -1.46
PMS1-216ENST00000447734 ACTN4O43707 911 aaKnown RBP5.94□□□□□ -1.46
PMS1-216ENST00000447734 SOX11P35716 441 aa5.94□□□□□ -1.46
PMS1-216ENST00000447734 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
PMS1-216ENST00000447734 CCER1Q8TC90 406 aaPredicted RBP5.94□□□□□ -1.46
PMS1-216ENST00000447734 PRR14Q9BWN1 585 aa5.94□□□□□ -1.46
PMS1-216ENST00000447734 HMX1Q9NP08 348 aaPredicted RBP5.94□□□□□ -1.46
PMS1-216ENST00000447734 MAFBQ9Y5Q3 323 aaPredicted RBP5.94□□□□□ -1.46
PMS1-216ENST00000447734 GPR37L1O60883 481 aa5.93□□□□□ -1.46
PMS1-216ENST00000447734 SLC10A3P09131 477 aa5.93□□□□□ -1.46
PMS1-216ENST00000447734 TRIM34Q9BYJ4 488 aa5.93□□□□□ -1.46
PMS1-216ENST00000447734 TMEM134Q9H6X4 195 aa5.93□□□□□ -1.46
PMS1-216ENST00000447734 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
PMS1-216ENST00000447734 ADH1BP00325 375 aa5.92□□□□□ -1.46
PMS1-216ENST00000447734 ERCC3P19447 782 aa5.92□□□□□ -1.46
PMS1-216ENST00000447734 CRIPAKQ8N1N5 446 aa5.92□□□□□ -1.46
PMS1-216ENST00000447734 HELBQ8NG08 1087 aaPredicted RBP5.92□□□□□ -1.46
PMS1-216ENST00000447734 PRR7Q8TB68 274 aa5.92□□□□□ -1.46
PMS1-216ENST00000447734 MRRFQ96E11 262 aaKnown RBP5.92□□□□□ -1.46
PMS1-216ENST00000447734 CFHP08603 1231 aa5.91□□□□□ -1.46
PMS1-216ENST00000447734 DNAJB2P25686 324 aa5.91□□□□□ -1.46
PMS1-216ENST00000447734 CTDSPL2Q05D32 466 aa5.91□□□□□ -1.46
PMS1-216ENST00000447734 SEMA3FQ13275 785 aa5.91□□□□□ -1.46
PMS1-216ENST00000447734 TSC1Q92574 1164 aa5.91□□□□□ -1.46
PMS1-216ENST00000447734 KDM4AO75164 1064 aa5.9□□□□□ -1.46
PMS1-216ENST00000447734 NFX1Q12986 1120 aaKnown RBP5.9□□□□□ -1.46
PMS1-216ENST00000447734 TBC1D9Q6ZT07 1266 aa5.9□□□□□ -1.46
PMS1-216ENST00000447734 RDH13Q8NBN7 331 aa5.9□□□□□ -1.46
PMS1-216ENST00000447734 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
PMS1-216ENST00000447734 ATP9BO43861 1147 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 AVPP01185 164 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 FDX1P10109 184 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 USP46P62068 366 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 ELOAQ14241 798 aaKnown RBP5.89□□□□□ -1.47
PMS1-216ENST00000447734 TMEM164Q5U3C3 297 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 TXNDC2Q86VQ3 553 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 LRRN4Q8WUT4 740 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 SLC6A16Q9GZN6 736 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 TOR4AQ9NXH8 423 aa5.89□□□□□ -1.47
PMS1-216ENST00000447734 GMPR2Q9P2T1 348 aaKnown RBP5.89□□□□□ -1.47
PMS1-216ENST00000447734 SLC4A3P48751 1232 aa5.88□□□□□ -1.47
PMS1-216ENST00000447734 FOXC1Q12948 553 aa5.88□□□□□ -1.47
PMS1-216ENST00000447734 PUS10Q3MIT2 529 aaKnown RBP5.88□□□□□ -1.47
PMS1-216ENST00000447734 DNAJC14Q6Y2X3 702 aaPredicted RBP5.88□□□□□ -1.47
PMS1-216ENST00000447734 FAM177A1Q8N128 213 aaPredicted RBP5.88□□□□□ -1.47
PMS1-216ENST00000447734 PNMA1Q8ND90 353 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms