RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
LRPPRC-205ENST00000447246 ITGAEP38570 1179 aa22.24■■□□□ 1.15
LRPPRC-205ENST00000447246 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
LRPPRC-205ENST00000447246 CHD4Q14839 1912 aa22.23■■□□□ 1.15
LRPPRC-205ENST00000447246 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
LRPPRC-205ENST00000447246 TMEM132EQ6IEE7 984 aa22.22■■□□□ 1.15
LRPPRC-205ENST00000447246 TRPM3Q9HCF6 1732 aaPredicted RBP22.22■■□□□ 1.15
LRPPRC-205ENST00000447246 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
LRPPRC-205ENST00000447246 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
LRPPRC-205ENST00000447246 PDGFDQ9GZP0 370 aaPredicted RBP22.2■■□□□ 1.14
LRPPRC-205ENST00000447246 RPGRIP1LQ68CZ1 1315 aa22.2■■□□□ 1.14
LRPPRC-205ENST00000447246 ADGRF5Q8IZF2 1346 aa22.2■■□□□ 1.14
LRPPRC-205ENST00000447246 ALS2Q96Q42 1657 aa22.2■■□□□ 1.14
LRPPRC-205ENST00000447246 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
LRPPRC-205ENST00000447246 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
LRPPRC-205ENST00000447246 ZBTB7AO95365 584 aa22.18■■□□□ 1.14
LRPPRC-205ENST00000447246 ANO8Q9HCE9 1232 aaPredicted RBP22.18■■□□□ 1.14
LRPPRC-205ENST00000447246 STRN4Q9NRL3 753 aa22.18■■□□□ 1.14
LRPPRC-205ENST00000447246 PRDM11Q9NQV5 511 aa22.17■■□□□ 1.14
LRPPRC-205ENST00000447246 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
LRPPRC-205ENST00000447246 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
LRPPRC-205ENST00000447246 GIGYF1O75420 1035 aaPredicted RBP22.13■■□□□ 1.13
LRPPRC-205ENST00000447246 PTGER2P43116 358 aa22.13■■□□□ 1.13
LRPPRC-205ENST00000447246 CHRNA2Q15822 529 aa22.13■■□□□ 1.13
LRPPRC-205ENST00000447246 YTHDC2Q9H6S0 1430 aaKnown RBP22.13■■□□□ 1.13
LRPPRC-205ENST00000447246 FHDC1Q9C0D6 1143 aaPredicted RBP22.12■■□□□ 1.13
LRPPRC-205ENST00000447246 ATF5Q9Y2D1 282 aaPredicted RBP22.12■■□□□ 1.13
LRPPRC-205ENST00000447246 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
LRPPRC-205ENST00000447246 SYT17Q9BSW7 474 aa22.1■■□□□ 1.13
LRPPRC-205ENST00000447246 GOLGB1Q14789 3259 aaKnown RBP22.1■■□□□ 1.13
LRPPRC-205ENST00000447246 KIAA0232Q92628 1395 aa22.1■■□□□ 1.13
LRPPRC-205ENST00000447246 RGPD3A6NKT7 1758 aaPredicted RBP22.06■■□□□ 1.12
LRPPRC-205ENST00000447246 RGPD4Q7Z3J3 1758 aa22.06■■□□□ 1.12
LRPPRC-205ENST00000447246 PHRF1Q9P1Y6 1649 aaKnown RBP22.06■■□□□ 1.12
LRPPRC-205ENST00000447246 GPRASP1Q5JY77 1395 aa22.05■■□□□ 1.12
LRPPRC-205ENST00000447246 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
LRPPRC-205ENST00000447246 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
LRPPRC-205ENST00000447246 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
LRPPRC-205ENST00000447246 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
LRPPRC-205ENST00000447246 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
LRPPRC-205ENST00000447246 BARGINQ6ZT62 677 aa22.03■■□□□ 1.12
LRPPRC-205ENST00000447246 BCL11BQ9C0K0 894 aaPredicted RBP22.03■■□□□ 1.12
LRPPRC-205ENST00000447246 ANKARQ7Z5J8 1434 aa22.03■■□□□ 1.12
LRPPRC-205ENST00000447246 ZC3H6P61129 1189 aaKnown RBP22.02■■□□□ 1.12
LRPPRC-205ENST00000447246 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
LRPPRC-205ENST00000447246 PRAM1Q96QH2 718 aa22.01■■□□□ 1.11
LRPPRC-205ENST00000447246 PEAK1Q9H792 1746 aa22■■□□□ 1.11
LRPPRC-205ENST00000447246 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
LRPPRC-205ENST00000447246 PTF1AQ7RTS3 328 aa22■■□□□ 1.11
LRPPRC-205ENST00000447246 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
LRPPRC-205ENST00000447246 SBF2Q86WG5 1849 aa21.99■■□□□ 1.11
LRPPRC-205ENST00000447246 EVA1CP58658 441 aa21.99■■□□□ 1.11
LRPPRC-205ENST00000447246 PARP4Q9UKK3 1724 aaKnown RBP21.99■■□□□ 1.11
LRPPRC-205ENST00000447246 TCP11L2Q8N4U5 519 aa21.98■■□□□ 1.11
LRPPRC-205ENST00000447246 PRR36Q9H6K5 1346 aa21.98■■□□□ 1.11
LRPPRC-205ENST00000447246 SIRT1Q96EB6 747 aa21.97■■□□□ 1.11
LRPPRC-205ENST00000447246 NUTM2GQ5VZR2 741 aa21.96■■□□□ 1.11
LRPPRC-205ENST00000447246 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
LRPPRC-205ENST00000447246 OVOS2A0A0G2JMS6 1433 aa21.96■■□□□ 1.11
LRPPRC-205ENST00000447246 OVOS2A0A0J9YW53 1432 aa21.96■■□□□ 1.11
LRPPRC-205ENST00000447246 OVOS2Q6IE36 1432 aa21.96■■□□□ 1.11
LRPPRC-205ENST00000447246 PLSCR1O15162 318 aa21.95■■□□□ 1.1
LRPPRC-205ENST00000447246 PROM2Q8N271 834 aa21.95■■□□□ 1.1
LRPPRC-205ENST00000447246 SGIP1Q9BQI5 828 aa21.95■■□□□ 1.1
LRPPRC-205ENST00000447246 ANKRD30BQ9BXX2 1392 aa21.95■■□□□ 1.1
LRPPRC-205ENST00000447246 GPR162Q16538 588 aa21.94■■□□□ 1.1
LRPPRC-205ENST00000447246 SPATA31E1Q6ZUB1 1445 aa21.94■■□□□ 1.1
LRPPRC-205ENST00000447246 NGDNQ8NEJ9 315 aaKnown RBP21.93■■□□□ 1.1
LRPPRC-205ENST00000447246 LRRC37A3O60309 1634 aa21.92■■□□□ 1.1
LRPPRC-205ENST00000447246 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
LRPPRC-205ENST00000447246 MTFR1LQ9H019 292 aa21.92■■□□□ 1.1
LRPPRC-205ENST00000447246 STK32BQ9NY57 414 aa21.92■■□□□ 1.1
LRPPRC-205ENST00000447246 PELP1Q8IZL8 1130 aaKnown RBP21.91■■□□□ 1.1
LRPPRC-205ENST00000447246 POGKQ9P215 609 aa21.91■■□□□ 1.1
LRPPRC-205ENST00000447246 LMO7Q8WWI1 1683 aa21.91■■□□□ 1.1
LRPPRC-205ENST00000447246 ARXQ96QS3 562 aa21.9■■□□□ 1.1
LRPPRC-205ENST00000447246 TULP4Q9NRJ4 1543 aa21.9■■□□□ 1.1
LRPPRC-205ENST00000447246 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
LRPPRC-205ENST00000447246 CFAP70Q5T0N1 1121 aa21.89■■□□□ 1.09
LRPPRC-205ENST00000447246 SLC15A2Q16348 729 aa21.88■■□□□ 1.09
LRPPRC-205ENST00000447246 ATP7BP35670 1465 aa21.88■■□□□ 1.09
LRPPRC-205ENST00000447246 MINK1Q8N4C8 1332 aaPredicted RBP21.87■■□□□ 1.09
LRPPRC-205ENST00000447246 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
LRPPRC-205ENST00000447246 C14orf93Q9H972 538 aaKnown RBP21.87■■□□□ 1.09
LRPPRC-205ENST00000447246 MAP3K5Q99683 1374 aa21.86■■□□□ 1.09
LRPPRC-205ENST00000447246 TXNRD1Q16881 649 aa21.85■■□□□ 1.09
LRPPRC-205ENST00000447246 THRAP3Q9Y2W1 955 aaKnown RBP21.85■■□□□ 1.09
LRPPRC-205ENST00000447246 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
LRPPRC-205ENST00000447246 COL5A2P05997 1499 aaPredicted RBP21.83■■□□□ 1.09
LRPPRC-205ENST00000447246 EIF3AQ14152 1382 aaKnown RBP21.82■■□□□ 1.08
LRPPRC-205ENST00000447246 DDB1Q16531 1140 aa21.8■■□□□ 1.08
LRPPRC-205ENST00000447246 AKAP12Q02952 1782 aa21.79■■□□□ 1.08
LRPPRC-205ENST00000447246 HSPA6P17066 643 aa21.79■■□□□ 1.08
LRPPRC-205ENST00000447246 ITSN1Q15811 1721 aa21.79■■□□□ 1.08
LRPPRC-205ENST00000447246 CRB1P82279 1406 aa21.79■■□□□ 1.08
LRPPRC-205ENST00000447246 ATP10DQ9P241 1426 aa21.79■■□□□ 1.08
LRPPRC-205ENST00000447246 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
LRPPRC-205ENST00000447246 WNK3Q9BYP7 1800 aa21.78■■□□□ 1.08
LRPPRC-205ENST00000447246 CPDO75976 1380 aa21.77■■□□□ 1.08
LRPPRC-205ENST00000447246 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms