RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ABCA3Q99758 1704 aa35.74■■■■□ 3.31
PMS1-214ENST00000446877 PRDM11Q9NQV5 511 aa35.73■■■■□ 3.31
PMS1-214ENST00000446877 TULP4Q9NRJ4 1543 aa35.72■■■■□ 3.31
PMS1-214ENST00000446877 SPATA31A5Q5VU36 1347 aa35.71■■■■□ 3.31
PMS1-214ENST00000446877 SPATA31A7Q8IWB4 1347 aa35.71■■■■□ 3.31
PMS1-214ENST00000446877 PSDA5PKW4 1024 aaPredicted RBP35.69■■■■□ 3.3
PMS1-214ENST00000446877 TRPM3Q9HCF6 1732 aaPredicted RBP35.67■■■■□ 3.3
PMS1-214ENST00000446877 COL14A1Q05707 1796 aaKnown RBP35.66■■■■□ 3.3
PMS1-214ENST00000446877 EN1Q05925 392 aaPredicted RBP35.66■■■■□ 3.3
PMS1-214ENST00000446877 FAM182BQ5T319 152 aa35.65■■■■□ 3.3
PMS1-214ENST00000446877 NUDT16Q96DE0 195 aaKnown RBP35.65■■■■□ 3.3
PMS1-214ENST00000446877 NRAPQ86VF7 1730 aa35.63■■■■□ 3.29
PMS1-214ENST00000446877 ALS2Q96Q42 1657 aa35.62■■■■□ 3.29
PMS1-214ENST00000446877 HRCP23327 699 aa35.61■■■■□ 3.29
PMS1-214ENST00000446877 STRN4Q9NRL3 753 aa35.59■■■■□ 3.29
PMS1-214ENST00000446877 KIAA0232Q92628 1395 aa35.59■■■■□ 3.29
PMS1-214ENST00000446877 CHRNA2Q15822 529 aa35.58■■■■□ 3.29
PMS1-214ENST00000446877 CDK19Q9BWU1 502 aa35.57■■■■□ 3.28
PMS1-214ENST00000446877 SPATA31A1Q5TZJ5 1347 aa35.57■■■■□ 3.28
PMS1-214ENST00000446877 ZC3H6P61129 1189 aaKnown RBP35.56■■■■□ 3.28
PMS1-214ENST00000446877 NUTM2GQ5VZR2 741 aa35.54■■■■□ 3.28
PMS1-214ENST00000446877 EVA1CP58658 441 aa35.53■■■■□ 3.28
PMS1-214ENST00000446877 FAM196AQ6ZSG2 479 aa35.53■■■■□ 3.28
PMS1-214ENST00000446877 R3HDM1Q15032 1099 aaKnown RBP35.52■■■■□ 3.28
PMS1-214ENST00000446877 CCDC61Q9Y6R9 512 aa35.52■■■■□ 3.28
PMS1-214ENST00000446877 LRP5O75197 1615 aa35.52■■■■□ 3.28
PMS1-214ENST00000446877 ATP7BP35670 1465 aa35.52■■■■□ 3.28
PMS1-214ENST00000446877 NBPF8Q3BBV2 869 aa35.51■■■■□ 3.28
PMS1-214ENST00000446877 TRIM37O94972 964 aa35.49■■■■□ 3.27
PMS1-214ENST00000446877 USP35Q9P2H5 1018 aa35.49■■■■□ 3.27
PMS1-214ENST00000446877 ACEP12821 1306 aa35.49■■■■□ 3.27
PMS1-214ENST00000446877 EZH2Q15910 746 aaKnown RBP35.48■■■■□ 3.27
PMS1-214ENST00000446877 DISP2A7MBM2 1401 aa35.48■■■■□ 3.27
PMS1-214ENST00000446877 RGPD1P0DJD0 1748 aa35.46■■■■□ 3.27
PMS1-214ENST00000446877 ABTB2Q8N961 1025 aa35.46■■■■□ 3.27
PMS1-214ENST00000446877 THSD7AQ9UPZ6 1657 aa35.46■■■■□ 3.27
PMS1-214ENST00000446877 PLEKHG3A1L390 1219 aa35.45■■■■□ 3.27
PMS1-214ENST00000446877 PDE3BQ13370 1112 aa35.45■■■■□ 3.27
PMS1-214ENST00000446877 POLR3AO14802 1390 aaPredicted RBP35.44■■■■□ 3.26
PMS1-214ENST00000446877 APBA3O96018 575 aa35.44■■■■□ 3.26
PMS1-214ENST00000446877 CRYBG1Q9Y4K1 1723 aa35.43■■■■□ 3.26
PMS1-214ENST00000446877 ITSN1Q15811 1721 aa35.43■■■■□ 3.26
PMS1-214ENST00000446877 BARGINQ6ZT62 677 aa35.42■■■■□ 3.26
PMS1-214ENST00000446877 CAMKK2Q96RR4 588 aa35.42■■■■□ 3.26
PMS1-214ENST00000446877 ARHGEF28Q8N1W1 1705 aaKnown RBP35.4■■■■□ 3.26
PMS1-214ENST00000446877 SSH2Q76I76 1423 aa35.38■■■■□ 3.25
PMS1-214ENST00000446877 LARP1Q6PKG0 1096 aaKnown RBP35.37■■■■□ 3.25
PMS1-214ENST00000446877 NLRP13Q86W25 1043 aa35.37■■■■□ 3.25
PMS1-214ENST00000446877 TCP11L2Q8N4U5 519 aa35.37■■■■□ 3.25
PMS1-214ENST00000446877 PARD3Q8TEW0 1356 aa35.37■■■■□ 3.25
PMS1-214ENST00000446877 SRPK2P78362 688 aaKnown RBP35.36■■■■□ 3.25
PMS1-214ENST00000446877 CPDO75976 1380 aa35.34■■■■□ 3.25
PMS1-214ENST00000446877 PHRF1Q9P1Y6 1649 aaKnown RBP35.33■■■■□ 3.25
PMS1-214ENST00000446877 NBPF1Q3BBV0 1214 aa35.32■■■■□ 3.24
PMS1-214ENST00000446877 GCP02774 474 aa35.31■■■■□ 3.24
PMS1-214ENST00000446877 THRAP3Q9Y2W1 955 aaKnown RBP35.31■■■■□ 3.24
PMS1-214ENST00000446877 USP19O94966 1318 aa35.31■■■■□ 3.24
PMS1-214ENST00000446877 NBPF14Q5TI25 921 aa35.3■■■■□ 3.24
PMS1-214ENST00000446877 TNS1Q9HBL0 1735 aaKnown RBP35.29■■■■□ 3.24
PMS1-214ENST00000446877 CAMTA1Q9Y6Y1 1673 aa35.28■■■■□ 3.24
PMS1-214ENST00000446877 CABP2Q9NPB3 220 aa35.27■■■■□ 3.24
PMS1-214ENST00000446877 CENPJQ9HC77 1338 aaPredicted RBP35.27■■■■□ 3.24
PMS1-214ENST00000446877 PPIP5K1Q6PFW1 1433 aa35.26■■■■□ 3.24
PMS1-214ENST00000446877 ZBTB7CA1YPR0 619 aa35.24■■■■□ 3.23
PMS1-214ENST00000446877 C11orf95C9JLR9 678 aaPredicted RBP35.24■■■■□ 3.23
PMS1-214ENST00000446877 NRKQ7Z2Y5 1582 aa35.24■■■■□ 3.23
PMS1-214ENST00000446877 TOPAZ1Q8N9V7 1692 aa35.24■■■■□ 3.23
PMS1-214ENST00000446877 BRD4O60885 1362 aaPredicted RBP35.23■■■■□ 3.23
PMS1-214ENST00000446877 NLRP6P59044 892 aa35.2■■■■□ 3.23
PMS1-214ENST00000446877 CABP1Q9NZU7 370 aa35.2■■■■□ 3.23
PMS1-214ENST00000446877 KIAA1210Q9ULL0 1709 aa35.2■■■■□ 3.23
PMS1-214ENST00000446877 COL5A2P05997 1499 aaPredicted RBP35.16■■■■□ 3.22
PMS1-214ENST00000446877 CRB1P82279 1406 aa35.15■■■■□ 3.22
PMS1-214ENST00000446877 LMO7Q8WWI1 1683 aa35.14■■■■□ 3.22
PMS1-214ENST00000446877 AATKQ6ZMQ8 1374 aa35.13■■■■□ 3.21
PMS1-214ENST00000446877 TOM1L2Q6ZVM7 507 aa35.11■■■■□ 3.21
PMS1-214ENST00000446877 USP6P35125 1406 aa35.1■■■■□ 3.21
PMS1-214ENST00000446877 DDB1Q16531 1140 aa35.1■■■■□ 3.21
PMS1-214ENST00000446877 PPP1R1BQ9UD71 204 aaPredicted RBP35.1■■■■□ 3.21
PMS1-214ENST00000446877 SPON1Q9HCB6 807 aa35.09■■■■□ 3.21
PMS1-214ENST00000446877 OVOS2A0A0G2JMS6 1433 aa35.07■■■■□ 3.21
PMS1-214ENST00000446877 OVOS2A0A0J9YW53 1432 aa35.07■■■■□ 3.21
PMS1-214ENST00000446877 OVOS2Q6IE36 1432 aa35.07■■■■□ 3.21
PMS1-214ENST00000446877 EVC2Q86UK5 1308 aa35.06■■■■□ 3.2
PMS1-214ENST00000446877 KCNQ2O43526 872 aa35.04■■■■□ 3.2
PMS1-214ENST00000446877 RREB1Q92766 1687 aa35.03■■■■□ 3.2
PMS1-214ENST00000446877 PLSCR1O15162 318 aa35.03■■■■□ 3.2
PMS1-214ENST00000446877 CDCA7Q9BWT1 371 aaPredicted RBP35.02■■■■□ 3.2
PMS1-214ENST00000446877 PARP4Q9UKK3 1724 aaKnown RBP35.01■■■■□ 3.2
PMS1-214ENST00000446877 DCAF8L1A6NGE4 600 aa35.01■■■■□ 3.2
PMS1-214ENST00000446877 L3MBTL2Q969R5 705 aa35.01■■■■□ 3.2
PMS1-214ENST00000446877 ZNF692Q9BU19 519 aaPredicted RBP35.01■■■■□ 3.2
PMS1-214ENST00000446877 BCL11BQ9C0K0 894 aaPredicted RBP35.01■■■■□ 3.2
PMS1-214ENST00000446877 NUP188Q5SRE5 1749 aa35.01■■■■□ 3.19
PMS1-214ENST00000446877 KCNH5Q8NCM2 988 aa35■■■■□ 3.19
PMS1-214ENST00000446877 AXIN2Q9Y2T1 843 aa35■■■■□ 3.19
PMS1-214ENST00000446877 WDR17Q8IZU2 1322 aa35■■■■□ 3.19
PMS1-214ENST00000446877 SLIT3O75094 1523 aa34.99■■■■□ 3.19
PMS1-214ENST00000446877 CSB-PGBD3P0DP91 1061 aa34.97■■■■□ 3.19
PMS1-214ENST00000446877 YY1P25490 414 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms