RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PPIP5K1Q6PFW1 1433 aa21.81■■□□□ 1.08
LAPTM4B-201ENST00000445593 TMEM2Q9UHN6 1383 aa21.8■■□□□ 1.08
LAPTM4B-201ENST00000445593 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
LAPTM4B-201ENST00000445593 RGS3P49796 1198 aa21.8■■□□□ 1.08
LAPTM4B-201ENST00000445593 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
LAPTM4B-201ENST00000445593 POLKQ9UBT6 870 aa21.78■■□□□ 1.08
LAPTM4B-201ENST00000445593 RIPK4P57078 832 aa21.78■■□□□ 1.08
LAPTM4B-201ENST00000445593 ROBO2Q9HCK4 1378 aa21.78■■□□□ 1.08
LAPTM4B-201ENST00000445593 TMPOP42166 694 aaKnown RBP21.77■■□□□ 1.08
LAPTM4B-201ENST00000445593 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
LAPTM4B-201ENST00000445593 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
LAPTM4B-201ENST00000445593 PRR36Q9H6K5 1346 aa21.76■■□□□ 1.07
LAPTM4B-201ENST00000445593 THUMPD2Q9BTF0 503 aaKnown RBP21.76■■□□□ 1.07
LAPTM4B-201ENST00000445593 PMFBP1Q8TBY8 1022 aa21.75■■□□□ 1.07
LAPTM4B-201ENST00000445593 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
LAPTM4B-201ENST00000445593 EID1Q9Y6B2 187 aa21.75■■□□□ 1.07
LAPTM4B-201ENST00000445593 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
LAPTM4B-201ENST00000445593 NLRP1Q9C000 1473 aa21.74■■□□□ 1.07
LAPTM4B-201ENST00000445593 RBM33Q96EV2 1170 aaKnown RBP21.74■■□□□ 1.07
LAPTM4B-201ENST00000445593 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 PDE4AP27815 886 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 PLEKHF1Q96S99 279 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 RTN4Q9NQC3 1192 aaKnown RBP21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 COG3Q96JB2 828 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 NGEFQ8N5V2 710 aa21.73■■□□□ 1.07
LAPTM4B-201ENST00000445593 RLBP1P12271 317 aa21.72■■□□□ 1.07
LAPTM4B-201ENST00000445593 WDR63Q8IWG1 891 aa21.72■■□□□ 1.07
LAPTM4B-201ENST00000445593 TCERG1O14776 1098 aaKnown RBP21.72■■□□□ 1.07
LAPTM4B-201ENST00000445593 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
LAPTM4B-201ENST00000445593 TRIM35Q9UPQ4 493 aa21.72■■□□□ 1.07
LAPTM4B-201ENST00000445593 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
LAPTM4B-201ENST00000445593 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
LAPTM4B-201ENST00000445593 AMOTL2Q9Y2J4 779 aa21.71■■□□□ 1.07
LAPTM4B-201ENST00000445593 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
LAPTM4B-201ENST00000445593 PLEKHG5O94827 1062 aa21.69■■□□□ 1.06
LAPTM4B-201ENST00000445593 NEFMP07197 916 aa21.69■■□□□ 1.06
LAPTM4B-201ENST00000445593 SETD1AO15047 1707 aaKnown RBP21.68■■□□□ 1.06
LAPTM4B-201ENST00000445593 IGHDP01880 384 aa21.68■■□□□ 1.06
LAPTM4B-201ENST00000445593 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
LAPTM4B-201ENST00000445593 ADAMTS13Q76LX8 1427 aa21.68■■□□□ 1.06
LAPTM4B-201ENST00000445593 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 ACEP12821 1306 aa21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 CENPQQ7L2Z9 268 aaPredicted RBP21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 KDM2BQ8NHM5 1336 aa21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 DLC1Q96QB1 1528 aa21.67■■□□□ 1.06
LAPTM4B-201ENST00000445593 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
LAPTM4B-201ENST00000445593 CCDC27Q2M243 656 aa21.65■■□□□ 1.06
LAPTM4B-201ENST00000445593 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
LAPTM4B-201ENST00000445593 CPS1P31327 1500 aa21.65■■□□□ 1.06
LAPTM4B-201ENST00000445593 ATP7BP35670 1465 aa21.64■■□□□ 1.05
LAPTM4B-201ENST00000445593 FTSJ3Q8IY81 847 aaKnown RBP21.64■■□□□ 1.05
LAPTM4B-201ENST00000445593 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
LAPTM4B-201ENST00000445593 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
LAPTM4B-201ENST00000445593 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
LAPTM4B-201ENST00000445593 DCTN1Q14203 1278 aa21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 BACH2Q9BYV9 841 aa21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 FAM83GA6ND36 823 aa21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 SSH1Q8WYL5 1049 aa21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 CPSF1Q10570 1443 aaKnown RBP21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 PTPRUQ92729 1446 aa21.62■■□□□ 1.05
LAPTM4B-201ENST00000445593 PDE3AQ14432 1141 aa21.61■■□□□ 1.05
LAPTM4B-201ENST00000445593 AEBP1Q8IUX7 1158 aa21.61■■□□□ 1.05
LAPTM4B-201ENST00000445593 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
LAPTM4B-201ENST00000445593 FCHSD2O94868 740 aa21.61■■□□□ 1.05
LAPTM4B-201ENST00000445593 PLEKHG1Q9ULL1 1385 aa21.6■■□□□ 1.05
LAPTM4B-201ENST00000445593 THEMISQ8N1K5 641 aaPredicted RBP21.6■■□□□ 1.05
LAPTM4B-201ENST00000445593 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 C14orf37Q86TY3 774 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 PNPLA6Q8IY17 1366 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 IL13P35225 146 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 FAM135BQ49AJ0 1406 aa21.59■■□□□ 1.05
LAPTM4B-201ENST00000445593 MAP2P11137 1827 aaKnown RBP21.58■■□□□ 1.05
LAPTM4B-201ENST00000445593 MED14O60244 1454 aa21.58■■□□□ 1.05
LAPTM4B-201ENST00000445593 KCNA6P17658 529 aa21.58■■□□□ 1.04
LAPTM4B-201ENST00000445593 PCDHB15Q9Y5E8 787 aa21.58■■□□□ 1.04
LAPTM4B-201ENST00000445593 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
LAPTM4B-201ENST00000445593 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
LAPTM4B-201ENST00000445593 NBR1Q14596 966 aa21.57■■□□□ 1.04
LAPTM4B-201ENST00000445593 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
LAPTM4B-201ENST00000445593 ZKSCAN2Q63HK3 967 aa21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 ZNF692Q9BU19 519 aaPredicted RBP21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 SULT6B1Q6IMI4 303 aa21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 PNNQ9H307 717 aaKnown RBP21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 NOB1Q9ULX3 412 aaKnown RBP21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
LAPTM4B-201ENST00000445593 IPO9Q96P70 1041 aaKnown RBP21.55■■□□□ 1.04
LAPTM4B-201ENST00000445593 TECPR2O15040 1411 aa21.55■■□□□ 1.04
LAPTM4B-201ENST00000445593 MS4A1P11836 297 aa21.55■■□□□ 1.04
LAPTM4B-201ENST00000445593 NFE2L2Q16236 605 aa21.54■■□□□ 1.04
LAPTM4B-201ENST00000445593 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
LAPTM4B-201ENST00000445593 TRIM27P14373 513 aa21.54■■□□□ 1.04
LAPTM4B-201ENST00000445593 DZIP1LQ8IYY4 767 aaKnown RBP21.54■■□□□ 1.04
LAPTM4B-201ENST00000445593 ZBTB47Q9UFB7 747 aaPredicted RBP21.54■■□□□ 1.04
LAPTM4B-201ENST00000445593 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.53■■□□□ 1.04
LAPTM4B-201ENST00000445593 ADGRB2O60241 1585 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms