RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ZNF530Q6P9A1 599 aaPredicted RBP9.7□□□□□ -0.86
RIF1-205ENST00000444746 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
RIF1-205ENST00000444746 BRD4O60885 1362 aaPredicted RBP9.7□□□□□ -0.86
RIF1-205ENST00000444746 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
RIF1-205ENST00000444746 A0A0U1RQG5 324 aaPredicted RBP9.7□□□□□ -0.86
RIF1-205ENST00000444746 TMEM57Q8N5G2 664 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 ADGRF5Q8IZF2 1346 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 CCDC30Q5VVM6 783 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 FIBPO43427 364 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 CABP4P57796 275 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
RIF1-205ENST00000444746 NOL10Q9BSC4 688 aaKnown RBP9.69□□□□□ -0.86
RIF1-205ENST00000444746 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
RIF1-205ENST00000444746 TRDNQ13061 729 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 EXOC6BQ9Y2D4 811 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 NCAPD3P42695 1498 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 SPC24Q8NBT2 197 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 CHMP4AQ9BY43 222 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 DAPK1P53355 1430 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 TSHZ3Q63HK5 1081 aa9.68□□□□□ -0.86
RIF1-205ENST00000444746 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
RIF1-205ENST00000444746 PDILTQ8N807 584 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 R3HCC1Q9Y3T6 440 aaKnown RBP9.67□□□□□ -0.86
RIF1-205ENST00000444746 CNNM1Q9NRU3 951 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 CWC27Q6UX04 472 aaKnown RBP9.67□□□□□ -0.86
RIF1-205ENST00000444746 ARHGEF11O15085 1522 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 PHF14O94880 888 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 TTC39AQ5SRH9 613 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 TPM3P06753 285 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 PLEKHO1Q53GL0 409 aaPredicted RBP9.67□□□□□ -0.86
RIF1-205ENST00000444746 TRAK2O60296 914 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 ATP2B2Q01814 1243 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 RTEL1-TNFRSF6BF6WH68 1400 aa9.67□□□□□ -0.86
RIF1-205ENST00000444746 NSD3Q9BZ95 1437 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
RIF1-205ENST00000444746 ERC2O15083 957 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
RIF1-205ENST00000444746 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
RIF1-205ENST00000444746 SKIDA1Q1XH10 827 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
RIF1-205ENST00000444746 CTDP1Q9Y5B0 961 aaPredicted RBP9.66□□□□□ -0.86
RIF1-205ENST00000444746 ANXA1P04083 346 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 TNNQ9UQP3 1299 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 ERICH2A1L162 156 aa9.66□□□□□ -0.86
RIF1-205ENST00000444746 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
RIF1-205ENST00000444746 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.86
RIF1-205ENST00000444746 CLASRPQ8N2M8 674 aaKnown RBP9.65□□□□□ -0.86
RIF1-205ENST00000444746 GNAI2P04899 355 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
RIF1-205ENST00000444746 MIA2Q96PC5 1412 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 IKQ13123 557 aaPredicted RBP9.65□□□□□ -0.86
RIF1-205ENST00000444746 AACSQ86V21 672 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 HOMER1Q86YM7 354 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 SLC4A8Q2Y0W8 1093 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 SASS6Q6UVJ0 657 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 SYNJ2O15056 1496 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 RNF20Q5VTR2 975 aa9.65□□□□□ -0.86
RIF1-205ENST00000444746 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.87
RIF1-205ENST00000444746 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.87
RIF1-205ENST00000444746 IFT57Q9NWB7 429 aa9.65□□□□□ -0.87
RIF1-205ENST00000444746 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
RIF1-205ENST00000444746 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
RIF1-205ENST00000444746 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
RIF1-205ENST00000444746 TOPBP1Q92547 1522 aa9.64□□□□□ -0.87
RIF1-205ENST00000444746 TMPOP42166 694 aaKnown RBP9.64□□□□□ -0.87
RIF1-205ENST00000444746 MVPQ14764 893 aaKnown RBP9.64□□□□□ -0.87
RIF1-205ENST00000444746 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
RIF1-205ENST00000444746 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
RIF1-205ENST00000444746 SKOR2Q2VWA4 1001 aaPredicted RBP9.64□□□□□ -0.87
RIF1-205ENST00000444746 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
RIF1-205ENST00000444746 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 CHD1LQ86WJ1 897 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 NUP133Q8WUM0 1156 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 SLFN5Q08AF3 891 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 BACH2Q9BYV9 841 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 PRXQ9BXM0 1461 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 RAB11FIP4Q86YS3 637 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 SRCIN1Q9C0H9 1055 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
RIF1-205ENST00000444746 NAP1L1P55209 391 aaKnown RBP9.63□□□□□ -0.87
RIF1-205ENST00000444746 CPLX2Q6PUV4 134 aaKnown RBP9.63□□□□□ -0.87
RIF1-205ENST00000444746 ATP6V1DQ9Y5K8 247 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 LRRCC1Q9C099 1032 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 ROCK1Q13464 1354 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 FOXO3O43524 673 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 GNAI3P08754 354 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 CCDC8Q9H0W5 538 aaPredicted RBP9.62□□□□□ -0.87
RIF1-205ENST00000444746 MYD88Q99836 296 aa9.62□□□□□ -0.87
RIF1-205ENST00000444746 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms