RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 SRPK2P78362 688 aaKnown RBP34.04■■■■□ 3.04
TMEM238-201ENST00000444469 MYT1Q01538 1121 aa34.04■■■■□ 3.04
TMEM238-201ENST00000444469 L3MBTL2Q969R5 705 aa34.03■■■■□ 3.04
TMEM238-201ENST00000444469 BTG4Q9NY30 223 aa34.03■■■■□ 3.04
TMEM238-201ENST00000444469 NEUROD1Q13562 356 aa34.02■■■■□ 3.04
TMEM238-201ENST00000444469 SEPT12Q8IYM1 358 aa34.02■■■■□ 3.04
TMEM238-201ENST00000444469 ACEP12821 1306 aa34.01■■■■□ 3.03
TMEM238-201ENST00000444469 COL14A1Q05707 1796 aaKnown RBP34■■■■□ 3.03
TMEM238-201ENST00000444469 PRDM11Q9NQV5 511 aa34■■■■□ 3.03
TMEM238-201ENST00000444469 SIN3AQ96ST3 1273 aa33.98■■■■□ 3.03
TMEM238-201ENST00000444469 POLR3AO14802 1390 aaPredicted RBP33.98■■■■□ 3.03
TMEM238-201ENST00000444469 NBPF8Q3BBV2 869 aa33.97■■■■□ 3.03
TMEM238-201ENST00000444469 TOPAZ1Q8N9V7 1692 aa33.96■■■■□ 3.03
TMEM238-201ENST00000444469 PLEKHG3A1L390 1219 aa33.96■■■■□ 3.03
TMEM238-201ENST00000444469 SF3B2Q13435 895 aaKnown RBP33.95■■■■□ 3.03
TMEM238-201ENST00000444469 NUTM2GQ5VZR2 741 aa33.93■■■■□ 3.02
TMEM238-201ENST00000444469 ONECUT3O60422 494 aaPredicted RBP33.92■■■■□ 3.02
TMEM238-201ENST00000444469 KRT27Q7Z3Y8 459 aa33.92■■■■□ 3.02
TMEM238-201ENST00000444469 PPIP5K1Q6PFW1 1433 aa33.92■■■■□ 3.02
TMEM238-201ENST00000444469 QRICH2Q9H0J4 1663 aa33.92■■■■□ 3.02
TMEM238-201ENST00000444469 NRAPQ86VF7 1730 aa33.92■■■■□ 3.02
TMEM238-201ENST00000444469 FAM98CQ17RN3 349 aaKnown RBP33.91■■■■□ 3.02
TMEM238-201ENST00000444469 ABTB2Q8N961 1025 aa33.91■■■■□ 3.02
TMEM238-201ENST00000444469 CABP2Q9NPB3 220 aa33.91■■■■□ 3.02
TMEM238-201ENST00000444469 CRYBG1Q9Y4K1 1723 aa33.9■■■■□ 3.02
TMEM238-201ENST00000444469 BLMP54132 1417 aaPredicted RBP33.9■■■■□ 3.02
TMEM238-201ENST00000444469 ROCK2O75116 1388 aaKnown RBP33.9■■■■□ 3.02
TMEM238-201ENST00000444469 KIAA0232Q92628 1395 aa33.89■■■■□ 3.02
TMEM238-201ENST00000444469 BRWD3Q6RI45 1802 aa33.89■■■■□ 3.02
TMEM238-201ENST00000444469 ZRANB1Q9UGI0 708 aa33.89■■■■□ 3.02
TMEM238-201ENST00000444469 ZC3H6P61129 1189 aaKnown RBP33.87■■■■□ 3.01
TMEM238-201ENST00000444469 PHRF1Q9P1Y6 1649 aaKnown RBP33.86■■■■□ 3.01
TMEM238-201ENST00000444469 EVC2Q86UK5 1308 aa33.86■■■■□ 3.01
TMEM238-201ENST00000444469 TRPM1Q7Z4N2 1603 aa33.86■■■■□ 3.01
TMEM238-201ENST00000444469 CHRNA2Q15822 529 aa33.85■■■■□ 3.01
TMEM238-201ENST00000444469 SPATA31A5Q5VU36 1347 aa33.83■■■■□ 3.01
TMEM238-201ENST00000444469 SPATA31A7Q8IWB4 1347 aa33.83■■■■□ 3.01
TMEM238-201ENST00000444469 NLRP13Q86W25 1043 aa33.83■■■■□ 3.01
TMEM238-201ENST00000444469 STRN4Q9NRL3 753 aa33.83■■■■□ 3.01
TMEM238-201ENST00000444469 EVA1CP58658 441 aa33.81■■■■□ 3
TMEM238-201ENST00000444469 BRD4O60885 1362 aaPredicted RBP33.81■■■■□ 3
TMEM238-201ENST00000444469 CABP1Q9NZU7 370 aa33.8■■■■□ 3
TMEM238-201ENST00000444469 EP400Q96L91 3159 aa33.76■■■■□ 3
TMEM238-201ENST00000444469 NRKQ7Z2Y5 1582 aa33.74■■■□□ 2.99
TMEM238-201ENST00000444469 USP19O94966 1318 aa33.74■■■□□ 2.99
TMEM238-201ENST00000444469 SPATA31A1Q5TZJ5 1347 aa33.74■■■□□ 2.99
TMEM238-201ENST00000444469 USP6P35125 1406 aa33.73■■■□□ 2.99
TMEM238-201ENST00000444469 DEFB132Q7Z7B7 95 aa33.73■■■□□ 2.99
TMEM238-201ENST00000444469 TONSLQ96HA7 1378 aa33.72■■■□□ 2.99
TMEM238-201ENST00000444469 GCP02774 474 aa33.72■■■□□ 2.99
TMEM238-201ENST00000444469 CPDO75976 1380 aa33.72■■■□□ 2.99
TMEM238-201ENST00000444469 BAG6P46379 1132 aa33.71■■■□□ 2.99
TMEM238-201ENST00000444469 USP35Q9P2H5 1018 aa33.71■■■□□ 2.99
TMEM238-201ENST00000444469 ZBTB7CA1YPR0 619 aa33.7■■■□□ 2.99
TMEM238-201ENST00000444469 NLRP6P59044 892 aa33.7■■■□□ 2.99
TMEM238-201ENST00000444469 SSH2Q76I76 1423 aa33.68■■■□□ 2.98
TMEM238-201ENST00000444469 ZNF692Q9BU19 519 aaPredicted RBP33.67■■■□□ 2.98
TMEM238-201ENST00000444469 CARD11Q9BXL7 1154 aa33.67■■■□□ 2.98
TMEM238-201ENST00000444469 THSD7AQ9UPZ6 1657 aa33.66■■■□□ 2.98
TMEM238-201ENST00000444469 FAM182BQ5T319 152 aa33.63■■■□□ 2.97
TMEM238-201ENST00000444469 CAMTA1Q9Y6Y1 1673 aa33.62■■■□□ 2.97
TMEM238-201ENST00000444469 LARP1Q6PKG0 1096 aaKnown RBP33.62■■■□□ 2.97
TMEM238-201ENST00000444469 PDE3BQ13370 1112 aa33.61■■■□□ 2.97
TMEM238-201ENST00000444469 BARGINQ6ZT62 677 aa33.6■■■□□ 2.97
TMEM238-201ENST00000444469 TCP11L2Q8N4U5 519 aa33.6■■■□□ 2.97
TMEM238-201ENST00000444469 RGPD1P0DJD0 1748 aa33.59■■■□□ 2.97
TMEM238-201ENST00000444469 LMO7Q8WWI1 1683 aa33.58■■■□□ 2.97
TMEM238-201ENST00000444469 TRIM26Q12899 539 aaPredicted RBP33.58■■■□□ 2.97
TMEM238-201ENST00000444469 FAM196AQ6ZSG2 479 aa33.58■■■□□ 2.97
TMEM238-201ENST00000444469 THRAP3Q9Y2W1 955 aaKnown RBP33.57■■■□□ 2.96
TMEM238-201ENST00000444469 TTC21BQ7Z4L5 1316 aa33.56■■■□□ 2.96
TMEM238-201ENST00000444469 TTC21AQ8NDW8 1320 aa33.56■■■□□ 2.96
TMEM238-201ENST00000444469 SLIT3O75094 1523 aa33.56■■■□□ 2.96
TMEM238-201ENST00000444469 KTN1Q86UP2 1357 aaKnown RBP33.56■■■□□ 2.96
TMEM238-201ENST00000444469 SBNO2Q9Y2G9 1366 aa33.56■■■□□ 2.96
TMEM238-201ENST00000444469 KCNH5Q8NCM2 988 aa33.55■■■□□ 2.96
TMEM238-201ENST00000444469 COL5A2P05997 1499 aaPredicted RBP33.54■■■□□ 2.96
TMEM238-201ENST00000444469 PIK3C2AO00443 1686 aa33.54■■■□□ 2.96
TMEM238-201ENST00000444469 AATKQ6ZMQ8 1374 aa33.53■■■□□ 2.96
TMEM238-201ENST00000444469 AKAP12Q02952 1782 aa33.52■■■□□ 2.96
TMEM238-201ENST00000444469 SOX12O15370 315 aa33.51■■■□□ 2.95
TMEM238-201ENST00000444469 EN1Q05925 392 aaPredicted RBP33.51■■■□□ 2.95
TMEM238-201ENST00000444469 CRB1P82279 1406 aa33.51■■■□□ 2.95
TMEM238-201ENST00000444469 TMC1Q8TDI8 760 aa33.5■■■□□ 2.95
TMEM238-201ENST00000444469 TRIM37O94972 964 aa33.49■■■□□ 2.95
TMEM238-201ENST00000444469 TOM1L2Q6ZVM7 507 aa33.49■■■□□ 2.95
TMEM238-201ENST00000444469 CPSF1Q10570 1443 aaKnown RBP33.48■■■□□ 2.95
TMEM238-201ENST00000444469 HDGFL2Q7Z4V5 671 aaPredicted RBP33.47■■■□□ 2.95
TMEM238-201ENST00000444469 CSB-PGBD3P0DP91 1061 aa33.44■■■□□ 2.94
TMEM238-201ENST00000444469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.44■■■□□ 2.94
TMEM238-201ENST00000444469 DISP2A7MBM2 1401 aa33.44■■■□□ 2.94
TMEM238-201ENST00000444469 APBA3O96018 575 aa33.43■■■□□ 2.94
TMEM238-201ENST00000444469 C11orf95C9JLR9 678 aaPredicted RBP33.42■■■□□ 2.94
TMEM238-201ENST00000444469 TNS1Q9HBL0 1735 aaKnown RBP33.42■■■□□ 2.94
TMEM238-201ENST00000444469 PSDA5PKW4 1024 aaPredicted RBP33.41■■■□□ 2.94
TMEM238-201ENST00000444469 ARHGEF25Q86VW2 580 aa33.41■■■□□ 2.94
TMEM238-201ENST00000444469 WDR17Q8IZU2 1322 aa33.4■■■□□ 2.94
TMEM238-201ENST00000444469 TERF2IPQ9NYB0 399 aa33.4■■■□□ 2.94
TMEM238-201ENST00000444469 MON2Q7Z3U7 1717 aa33.39■■■□□ 2.94
TMEM238-201ENST00000444469 SLC24A1O60721 1099 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms