RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PAK3O75914 559 aaPredicted RBP26.82■■□□□ 1.88
ATPAF2-201ENST00000444058 CARD11Q9BXL7 1154 aa26.82■■□□□ 1.88
ATPAF2-201ENST00000444058 ABCA3Q99758 1704 aa26.82■■□□□ 1.88
ATPAF2-201ENST00000444058 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
ATPAF2-201ENST00000444058 SBNO2Q9Y2G9 1366 aa26.81■■□□□ 1.88
ATPAF2-201ENST00000444058 RGS12O14924 1447 aa26.81■■□□□ 1.88
ATPAF2-201ENST00000444058 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.8■■□□□ 1.88
ATPAF2-201ENST00000444058 BRD4O60885 1362 aaPredicted RBP26.8■■□□□ 1.88
ATPAF2-201ENST00000444058 GJD4Q96KN9 370 aaPredicted RBP26.78■■□□□ 1.88
ATPAF2-201ENST00000444058 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
ATPAF2-201ENST00000444058 FAM83GA6ND36 823 aa26.76■■□□□ 1.87
ATPAF2-201ENST00000444058 CABP1Q9NZU7 370 aa26.76■■□□□ 1.87
ATPAF2-201ENST00000444058 PLEKHG5O94827 1062 aa26.75■■□□□ 1.87
ATPAF2-201ENST00000444058 NWD2Q9ULI1 1742 aa26.74■■□□□ 1.87
ATPAF2-201ENST00000444058 CRYBG1Q9Y4K1 1723 aa26.73■■□□□ 1.87
ATPAF2-201ENST00000444058 TIMELESSQ9UNS1 1208 aa26.73■■□□□ 1.87
ATPAF2-201ENST00000444058 VPS72Q15906 364 aa26.72■■□□□ 1.87
ATPAF2-201ENST00000444058 ATAD2Q6PL18 1390 aa26.71■■□□□ 1.87
ATPAF2-201ENST00000444058 ABTB2Q8N961 1025 aa26.71■■□□□ 1.87
ATPAF2-201ENST00000444058 UPF1Q92900 1129 aaKnown RBP eCLIP26.71■■□□□ 1.87
ATPAF2-201ENST00000444058 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.87
ATPAF2-201ENST00000444058 USP6P35125 1406 aa26.69■■□□□ 1.86
ATPAF2-201ENST00000444058 ZNF692Q9BU19 519 aaPredicted RBP26.69■■□□□ 1.86
ATPAF2-201ENST00000444058 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
ATPAF2-201ENST00000444058 COL14A1Q05707 1796 aaKnown RBP26.69■■□□□ 1.86
ATPAF2-201ENST00000444058 NLRP13Q86W25 1043 aa26.67■■□□□ 1.86
ATPAF2-201ENST00000444058 SSH2Q76I76 1423 aa26.66■■□□□ 1.86
ATPAF2-201ENST00000444058 PRDM11Q9NQV5 511 aa26.66■■□□□ 1.86
ATPAF2-201ENST00000444058 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
ATPAF2-201ENST00000444058 GLI3P10071 1580 aa26.66■■□□□ 1.86
ATPAF2-201ENST00000444058 USP19O94966 1318 aa26.65■■□□□ 1.86
ATPAF2-201ENST00000444058 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
ATPAF2-201ENST00000444058 PUS7Q96PZ0 661 aaKnown RBP26.65■■□□□ 1.86
ATPAF2-201ENST00000444058 ONECUT3O60422 494 aaPredicted RBP26.64■■□□□ 1.86
ATPAF2-201ENST00000444058 NUTM2GQ5VZR2 741 aa26.64■■□□□ 1.86
ATPAF2-201ENST00000444058 PHRF1Q9P1Y6 1649 aaKnown RBP26.64■■□□□ 1.85
ATPAF2-201ENST00000444058 KIAA0232Q92628 1395 aa26.63■■□□□ 1.85
ATPAF2-201ENST00000444058 CPSF1Q10570 1443 aaKnown RBP26.62■■□□□ 1.85
ATPAF2-201ENST00000444058 CPDO75976 1380 aa26.61■■□□□ 1.85
ATPAF2-201ENST00000444058 NRAPQ86VF7 1730 aa26.61■■□□□ 1.85
ATPAF2-201ENST00000444058 CCDC9Q9Y3X0 531 aaKnown RBP26.6■■□□□ 1.85
ATPAF2-201ENST00000444058 GCP02774 474 aa26.59■■□□□ 1.85
ATPAF2-201ENST00000444058 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
ATPAF2-201ENST00000444058 ZC3H6P61129 1189 aaKnown RBP26.58■■□□□ 1.85
ATPAF2-201ENST00000444058 TESK2Q96S53 571 aa26.58■■□□□ 1.85
ATPAF2-201ENST00000444058 ST20-MTHFSA0A0A6YYL1 179 aa26.57■■□□□ 1.84
ATPAF2-201ENST00000444058 NLRP6P59044 892 aa26.57■■□□□ 1.84
ATPAF2-201ENST00000444058 TTC21AQ8NDW8 1320 aa26.57■■□□□ 1.84
ATPAF2-201ENST00000444058 TTC21BQ7Z4L5 1316 aa26.56■■□□□ 1.84
ATPAF2-201ENST00000444058 AKAP12Q02952 1782 aa26.56■■□□□ 1.84
ATPAF2-201ENST00000444058 SEPT12Q8IYM1 358 aa26.55■■□□□ 1.84
ATPAF2-201ENST00000444058 SPATA31A5Q5VU36 1347 aa26.55■■□□□ 1.84
ATPAF2-201ENST00000444058 SPATA31A7Q8IWB4 1347 aa26.55■■□□□ 1.84
ATPAF2-201ENST00000444058 KTN1Q86UP2 1357 aaKnown RBP26.55■■□□□ 1.84
ATPAF2-201ENST00000444058 CHRNA2Q15822 529 aa26.54■■□□□ 1.84
ATPAF2-201ENST00000444058 SLIT3O75094 1523 aa26.53■■□□□ 1.84
ATPAF2-201ENST00000444058 PIK3C2AO00443 1686 aa26.51■■□□□ 1.83
ATPAF2-201ENST00000444058 USP47Q96K76 1375 aa26.51■■□□□ 1.83
ATPAF2-201ENST00000444058 NINLQ9Y2I6 1382 aa26.51■■□□□ 1.83
ATPAF2-201ENST00000444058 CCDC125Q86Z20 511 aa26.51■■□□□ 1.83
ATPAF2-201ENST00000444058 CD163L1Q9NR16 1453 aa26.5■■□□□ 1.83
ATPAF2-201ENST00000444058 TMC1Q8TDI8 760 aa26.5■■□□□ 1.83
ATPAF2-201ENST00000444058 HDGFL2Q7Z4V5 671 aaPredicted RBP26.49■■□□□ 1.83
ATPAF2-201ENST00000444058 SLC12A5Q9H2X9 1139 aa26.49■■□□□ 1.83
ATPAF2-201ENST00000444058 TERF2IPQ9NYB0 399 aa26.49■■□□□ 1.83
ATPAF2-201ENST00000444058 MON2Q7Z3U7 1717 aa26.48■■□□□ 1.83
ATPAF2-201ENST00000444058 LMO7Q8WWI1 1683 aa26.48■■□□□ 1.83
ATPAF2-201ENST00000444058 SPATA31A1Q5TZJ5 1347 aa26.48■■□□□ 1.83
ATPAF2-201ENST00000444058 FAM98CQ17RN3 349 aaKnown RBP26.48■■□□□ 1.83
ATPAF2-201ENST00000444058 KCNH5Q8NCM2 988 aa26.48■■□□□ 1.83
ATPAF2-201ENST00000444058 CAMTA1Q9Y6Y1 1673 aa26.47■■□□□ 1.83
ATPAF2-201ENST00000444058 EVA1CP58658 441 aa26.47■■□□□ 1.83
ATPAF2-201ENST00000444058 CCER1Q8TC90 406 aaPredicted RBP26.47■■□□□ 1.83
ATPAF2-201ENST00000444058 AATKQ6ZMQ8 1374 aa26.46■■□□□ 1.83
ATPAF2-201ENST00000444058 KRT27Q7Z3Y8 459 aa26.46■■□□□ 1.83
ATPAF2-201ENST00000444058 STRN4Q9NRL3 753 aa26.46■■□□□ 1.83
ATPAF2-201ENST00000444058 USP31Q70CQ4 1352 aa26.45■■□□□ 1.82
ATPAF2-201ENST00000444058 TMF1P82094 1093 aa26.44■■□□□ 1.82
ATPAF2-201ENST00000444058 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
ATPAF2-201ENST00000444058 EDC4Q6P2E9 1401 aaKnown RBP26.43■■□□□ 1.82
ATPAF2-201ENST00000444058 A0A0G2JS52 829 aa26.42■■□□□ 1.82
ATPAF2-201ENST00000444058 MYT1Q01538 1121 aa26.42■■□□□ 1.82
ATPAF2-201ENST00000444058 EP400Q96L91 3159 aa26.42■■□□□ 1.82
ATPAF2-201ENST00000444058 A0A1W2PP64 1363 aa26.42■■□□□ 1.82
ATPAF2-201ENST00000444058 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
ATPAF2-201ENST00000444058 ARHGEF25Q86VW2 580 aa26.41■■□□□ 1.82
ATPAF2-201ENST00000444058 COL5A2P05997 1499 aaPredicted RBP26.41■■□□□ 1.82
ATPAF2-201ENST00000444058 THSD7AQ9UPZ6 1657 aa26.41■■□□□ 1.82
ATPAF2-201ENST00000444058 CDCA8Q53HL2 280 aa26.4■■□□□ 1.82
ATPAF2-201ENST00000444058 LARP1Q6PKG0 1096 aaKnown RBP26.4■■□□□ 1.82
ATPAF2-201ENST00000444058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.4■■□□□ 1.82
ATPAF2-201ENST00000444058 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.82
ATPAF2-201ENST00000444058 THRAP3Q9Y2W1 955 aaKnown RBP26.39■■□□□ 1.82
ATPAF2-201ENST00000444058 USP54Q70EL1 1684 aa26.38■■□□□ 1.81
ATPAF2-201ENST00000444058 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
ATPAF2-201ENST00000444058 NFAT5O94916 1531 aa26.36■■□□□ 1.81
ATPAF2-201ENST00000444058 NME9Q86XW9 330 aa26.36■■□□□ 1.81
ATPAF2-201ENST00000444058 CRB1P82279 1406 aa26.36■■□□□ 1.81
ATPAF2-201ENST00000444058 USP35Q9P2H5 1018 aa26.35■■□□□ 1.81
ATPAF2-201ENST00000444058 COL18A1P39060 1754 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms