RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 NFE2L2Q16236 605 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 HSP90AB2PQ58FF8 381 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 PTPRTO14522 1441 aa13.29□□□□□ -0.28
CALD1-210ENST00000443197 ZC3H6P61129 1189 aaKnown RBP13.29□□□□□ -0.28
CALD1-210ENST00000443197 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
CALD1-210ENST00000443197 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
CALD1-210ENST00000443197 CROCC2H7BZ55 1655 aa13.28□□□□□ -0.28
CALD1-210ENST00000443197 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
CALD1-210ENST00000443197 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.28
CALD1-210ENST00000443197 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.28
CALD1-210ENST00000443197 API5Q9BZZ5 524 aaKnown RBP13.27□□□□□ -0.28
CALD1-210ENST00000443197 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
CALD1-210ENST00000443197 TRPM2O94759 1503 aa13.27□□□□□ -0.29
CALD1-210ENST00000443197 LTKP29376 864 aa13.27□□□□□ -0.29
CALD1-210ENST00000443197 PPIP5K1Q6PFW1 1433 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 TNNQ9UQP3 1299 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 BCORL1Q5H9F3 1711 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 KCNA6P17658 529 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
CALD1-210ENST00000443197 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
CALD1-210ENST00000443197 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
CALD1-210ENST00000443197 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
CALD1-210ENST00000443197 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
CALD1-210ENST00000443197 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
CALD1-210ENST00000443197 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
CALD1-210ENST00000443197 HMMRO75330 724 aa13.25□□□□□ -0.29
CALD1-210ENST00000443197 EVA1CP58658 441 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
CALD1-210ENST00000443197 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 TTC21BQ7Z4L5 1316 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 IQGAP3Q86VI3 1631 aa13.24□□□□□ -0.29
CALD1-210ENST00000443197 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
CALD1-210ENST00000443197 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
CALD1-210ENST00000443197 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
CALD1-210ENST00000443197 NSD2O96028 1365 aa13.23□□□□□ -0.29
CALD1-210ENST00000443197 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
CALD1-210ENST00000443197 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
CALD1-210ENST00000443197 HECW2Q9P2P5 1572 aa13.21□□□□□ -0.29
CALD1-210ENST00000443197 KCNJ4P48050 445 aa13.21□□□□□ -0.29
CALD1-210ENST00000443197 BACH2Q9BYV9 841 aa13.21□□□□□ -0.29
CALD1-210ENST00000443197 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
CALD1-210ENST00000443197 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.3
CALD1-210ENST00000443197 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.3
CALD1-210ENST00000443197 CLTCL1P53675 1640 aa13.21□□□□□ -0.3
CALD1-210ENST00000443197 TRIM27P14373 513 aa13.21□□□□□ -0.3
CALD1-210ENST00000443197 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
CALD1-210ENST00000443197 UNC13BO14795 1591 aa13.2□□□□□ -0.3
CALD1-210ENST00000443197 METP08581 1390 aa13.2□□□□□ -0.3
CALD1-210ENST00000443197 IGHDP01880 384 aa13.2□□□□□ -0.3
CALD1-210ENST00000443197 RILPL2Q969X0 211 aa13.2□□□□□ -0.3
CALD1-210ENST00000443197 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 ABCA9Q8IUA7 1624 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 HSPA2P54652 639 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
CALD1-210ENST00000443197 ABCC3O15438 1527 aa13.19□□□□□ -0.3
CALD1-210ENST00000443197 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
CALD1-210ENST00000443197 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
CALD1-210ENST00000443197 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
CALD1-210ENST00000443197 SYTL4Q96C24 671 aaPredicted RBP13.18□□□□□ -0.3
CALD1-210ENST00000443197 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
CALD1-210ENST00000443197 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
CALD1-210ENST00000443197 RLBP1P12271 317 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 TET3O43151 1660 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
CALD1-210ENST00000443197 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
CALD1-210ENST00000443197 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
CALD1-210ENST00000443197 E9PCH4 1651 aa13.16□□□□□ -0.3
CALD1-210ENST00000443197 F6X3S4 739 aa13.16□□□□□ -0.3
CALD1-210ENST00000443197 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
CALD1-210ENST00000443197 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
CALD1-210ENST00000443197 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
CALD1-210ENST00000443197 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
CALD1-210ENST00000443197 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
CALD1-210ENST00000443197 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
CALD1-210ENST00000443197 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
CALD1-210ENST00000443197 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
CALD1-210ENST00000443197 MSH5O43196 834 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 MYOM2P54296 1465 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
CALD1-210ENST00000443197 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms