RNA–Protein interactions for RNA: ENST00000441844.2

RCL1-205, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 2

Gene RCL1, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-205ENST00000441844 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
RCL1-205ENST00000441844 BCL9LQ86UU0 1499 aa16.56■□□□□ 0.24
RCL1-205ENST00000441844 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
RCL1-205ENST00000441844 ATRNO75882 1429 aa16.55■□□□□ 0.24
RCL1-205ENST00000441844 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
RCL1-205ENST00000441844 FAM83GA6ND36 823 aa16.54■□□□□ 0.24
RCL1-205ENST00000441844 SLIT2O94813 1529 aa16.54■□□□□ 0.24
RCL1-205ENST00000441844 TOPAZ1Q8N9V7 1692 aa16.53■□□□□ 0.24
RCL1-205ENST00000441844 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
RCL1-205ENST00000441844 SBNO2Q9Y2G9 1366 aa16.52■□□□□ 0.24
RCL1-205ENST00000441844 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
RCL1-205ENST00000441844 ABTB2Q8N961 1025 aa16.52■□□□□ 0.24
RCL1-205ENST00000441844 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
RCL1-205ENST00000441844 RGS12O14924 1447 aa16.52■□□□□ 0.23
RCL1-205ENST00000441844 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
RCL1-205ENST00000441844 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
RCL1-205ENST00000441844 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
RCL1-205ENST00000441844 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
RCL1-205ENST00000441844 VPS72Q15906 364 aa16.49■□□□□ 0.23
RCL1-205ENST00000441844 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
RCL1-205ENST00000441844 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
RCL1-205ENST00000441844 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
RCL1-205ENST00000441844 USP6P35125 1406 aa16.48■□□□□ 0.23
RCL1-205ENST00000441844 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
RCL1-205ENST00000441844 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
RCL1-205ENST00000441844 SLC24A1O60721 1099 aa16.47■□□□□ 0.23
RCL1-205ENST00000441844 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
RCL1-205ENST00000441844 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
RCL1-205ENST00000441844 ABCA3Q99758 1704 aa16.46■□□□□ 0.23
RCL1-205ENST00000441844 KIAA0232Q92628 1395 aa16.46■□□□□ 0.23
RCL1-205ENST00000441844 USP19O94966 1318 aa16.45■□□□□ 0.22
RCL1-205ENST00000441844 NLRP6P59044 892 aa16.45■□□□□ 0.22
RCL1-205ENST00000441844 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
RCL1-205ENST00000441844 GCP02774 474 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 CHRNA2Q15822 529 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 TESK2Q96S53 571 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.44■□□□□ 0.22
RCL1-205ENST00000441844 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 TTC21BQ7Z4L5 1316 aa16.44■□□□□ 0.22
RCL1-205ENST00000441844 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
RCL1-205ENST00000441844 HDGFL2Q7Z4V5 671 aaPredicted RBP16.42■□□□□ 0.22
RCL1-205ENST00000441844 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
RCL1-205ENST00000441844 TTC21AQ8NDW8 1320 aa16.42■□□□□ 0.22
RCL1-205ENST00000441844 NWD2Q9ULI1 1742 aa16.42■□□□□ 0.22
RCL1-205ENST00000441844 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
RCL1-205ENST00000441844 USP47Q96K76 1375 aa16.41■□□□□ 0.22
RCL1-205ENST00000441844 ONECUT3O60422 494 aaPredicted RBP16.41■□□□□ 0.22
RCL1-205ENST00000441844 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
RCL1-205ENST00000441844 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
RCL1-205ENST00000441844 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
RCL1-205ENST00000441844 CPDO75976 1380 aa16.4■□□□□ 0.22
RCL1-205ENST00000441844 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
RCL1-205ENST00000441844 GLI3P10071 1580 aa16.4■□□□□ 0.22
RCL1-205ENST00000441844 TERF2IPQ9NYB0 399 aa16.4■□□□□ 0.22
RCL1-205ENST00000441844 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
RCL1-205ENST00000441844 EVA1CP58658 441 aa16.39■□□□□ 0.21
RCL1-205ENST00000441844 TMF1P82094 1093 aa16.39■□□□□ 0.21
RCL1-205ENST00000441844 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
RCL1-205ENST00000441844 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
RCL1-205ENST00000441844 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
RCL1-205ENST00000441844 PHRF1Q9P1Y6 1649 aaKnown RBP16.38■□□□□ 0.21
RCL1-205ENST00000441844 A0A0G2JS52 829 aa16.38■□□□□ 0.21
RCL1-205ENST00000441844 MYT1Q01538 1121 aa16.38■□□□□ 0.21
RCL1-205ENST00000441844 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
RCL1-205ENST00000441844 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
RCL1-205ENST00000441844 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
RCL1-205ENST00000441844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
RCL1-205ENST00000441844 NRKQ7Z2Y5 1582 aa16.37■□□□□ 0.21
RCL1-205ENST00000441844 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
RCL1-205ENST00000441844 CDCA8Q53HL2 280 aa16.35■□□□□ 0.21
RCL1-205ENST00000441844 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
RCL1-205ENST00000441844 SPATA31A1Q5TZJ5 1347 aa16.35■□□□□ 0.21
RCL1-205ENST00000441844 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
RCL1-205ENST00000441844 SLIT3O75094 1523 aa16.35■□□□□ 0.21
RCL1-205ENST00000441844 KRT27Q7Z3Y8 459 aa16.34■□□□□ 0.21
RCL1-205ENST00000441844 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
RCL1-205ENST00000441844 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
RCL1-205ENST00000441844 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
RCL1-205ENST00000441844 SOX12O15370 315 aa16.33■□□□□ 0.2
RCL1-205ENST00000441844 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
RCL1-205ENST00000441844 NME9Q86XW9 330 aa16.33■□□□□ 0.2
RCL1-205ENST00000441844 EDC4Q6P2E9 1401 aaKnown RBP16.33■□□□□ 0.2
RCL1-205ENST00000441844 PIK3C2AO00443 1686 aa16.33■□□□□ 0.2
RCL1-205ENST00000441844 AKAP12Q02952 1782 aa16.33■□□□□ 0.2
RCL1-205ENST00000441844 USP31Q70CQ4 1352 aa16.32■□□□□ 0.2
RCL1-205ENST00000441844 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
RCL1-205ENST00000441844 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
RCL1-205ENST00000441844 ZRANB1Q9UGI0 708 aa16.32■□□□□ 0.2
RCL1-205ENST00000441844 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
RCL1-205ENST00000441844 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
RCL1-205ENST00000441844 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
RCL1-205ENST00000441844 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
RCL1-205ENST00000441844 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
RCL1-205ENST00000441844 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
RCL1-205ENST00000441844 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
RCL1-205ENST00000441844 LMO7Q8WWI1 1683 aa16.28■□□□□ 0.2
RCL1-205ENST00000441844 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
RCL1-205ENST00000441844 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
RCL1-205ENST00000441844 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms