RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 VPS72Q15906 364 aa23.43■■□□□ 1.34
SNRPD3-204ENST00000439775 QRICH2Q9H0J4 1663 aa23.42■■□□□ 1.34
SNRPD3-204ENST00000439775 EP400Q96L91 3159 aa23.42■■□□□ 1.34
SNRPD3-204ENST00000439775 PLEKHG3A1L390 1219 aa23.41■■□□□ 1.34
SNRPD3-204ENST00000439775 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
SNRPD3-204ENST00000439775 PAK3O75914 559 aaPredicted RBP23.41■■□□□ 1.34
SNRPD3-204ENST00000439775 COL14A1Q05707 1796 aaKnown RBP23.41■■□□□ 1.34
SNRPD3-204ENST00000439775 NRAPQ86VF7 1730 aa23.4■■□□□ 1.34
SNRPD3-204ENST00000439775 ACEP12821 1306 aa23.39■■□□□ 1.34
SNRPD3-204ENST00000439775 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
SNRPD3-204ENST00000439775 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
SNRPD3-204ENST00000439775 PPIP5K1Q6PFW1 1433 aa23.37■■□□□ 1.33
SNRPD3-204ENST00000439775 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
SNRPD3-204ENST00000439775 NBPF8Q3BBV2 869 aa23.37■■□□□ 1.33
SNRPD3-204ENST00000439775 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
SNRPD3-204ENST00000439775 ONECUT3O60422 494 aaPredicted RBP23.34■■□□□ 1.33
SNRPD3-204ENST00000439775 BTG4Q9NY30 223 aa23.34■■□□□ 1.33
SNRPD3-204ENST00000439775 BRD4O60885 1362 aaPredicted RBP23.33■■□□□ 1.33
SNRPD3-204ENST00000439775 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
SNRPD3-204ENST00000439775 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
SNRPD3-204ENST00000439775 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
SNRPD3-204ENST00000439775 PRDM11Q9NQV5 511 aa23.32■■□□□ 1.32
SNRPD3-204ENST00000439775 SEPT12Q8IYM1 358 aa23.31■■□□□ 1.32
SNRPD3-204ENST00000439775 KIAA0232Q92628 1395 aa23.3■■□□□ 1.32
SNRPD3-204ENST00000439775 NRKQ7Z2Y5 1582 aa23.3■■□□□ 1.32
SNRPD3-204ENST00000439775 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
SNRPD3-204ENST00000439775 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
SNRPD3-204ENST00000439775 USP19O94966 1318 aa23.29■■□□□ 1.32
SNRPD3-204ENST00000439775 USP6P35125 1406 aa23.27■■□□□ 1.32
SNRPD3-204ENST00000439775 NUTM2GQ5VZR2 741 aa23.27■■□□□ 1.32
SNRPD3-204ENST00000439775 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
SNRPD3-204ENST00000439775 BLMP54132 1417 aaPredicted RBP23.26■■□□□ 1.31
SNRPD3-204ENST00000439775 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
SNRPD3-204ENST00000439775 SPATA31A5Q5VU36 1347 aa23.26■■□□□ 1.31
SNRPD3-204ENST00000439775 SPATA31A7Q8IWB4 1347 aa23.26■■□□□ 1.31
SNRPD3-204ENST00000439775 CABP1Q9NZU7 370 aa23.25■■□□□ 1.31
SNRPD3-204ENST00000439775 CPDO75976 1380 aa23.25■■□□□ 1.31
SNRPD3-204ENST00000439775 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
SNRPD3-204ENST00000439775 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
SNRPD3-204ENST00000439775 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
SNRPD3-204ENST00000439775 FAM98CQ17RN3 349 aaKnown RBP23.23■■□□□ 1.31
SNRPD3-204ENST00000439775 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
SNRPD3-204ENST00000439775 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
SNRPD3-204ENST00000439775 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
SNRPD3-204ENST00000439775 ZC3H6P61129 1189 aaKnown RBP23.22■■□□□ 1.31
SNRPD3-204ENST00000439775 CHRNA2Q15822 529 aa23.22■■□□□ 1.31
SNRPD3-204ENST00000439775 LMO7Q8WWI1 1683 aa23.21■■□□□ 1.31
SNRPD3-204ENST00000439775 A0A0G2JS52 829 aa23.2■■□□□ 1.3
SNRPD3-204ENST00000439775 MYT1Q01538 1121 aa23.2■■□□□ 1.3
SNRPD3-204ENST00000439775 SLIT3O75094 1523 aa23.19■■□□□ 1.3
SNRPD3-204ENST00000439775 SPATA31A1Q5TZJ5 1347 aa23.19■■□□□ 1.3
SNRPD3-204ENST00000439775 CARD11Q9BXL7 1154 aa23.19■■□□□ 1.3
SNRPD3-204ENST00000439775 GCP02774 474 aa23.18■■□□□ 1.3
SNRPD3-204ENST00000439775 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
SNRPD3-204ENST00000439775 CAMTA1Q9Y6Y1 1673 aa23.17■■□□□ 1.3
SNRPD3-204ENST00000439775 ZNF692Q9BU19 519 aaPredicted RBP23.16■■□□□ 1.3
SNRPD3-204ENST00000439775 STRN4Q9NRL3 753 aa23.16■■□□□ 1.3
SNRPD3-204ENST00000439775 AKAP12Q02952 1782 aa23.16■■□□□ 1.3
SNRPD3-204ENST00000439775 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
SNRPD3-204ENST00000439775 NLRP6P59044 892 aa23.14■■□□□ 1.29
SNRPD3-204ENST00000439775 SF3B2Q13435 895 aaKnown RBP23.13■■□□□ 1.29
SNRPD3-204ENST00000439775 COL5A2P05997 1499 aaPredicted RBP23.12■■□□□ 1.29
SNRPD3-204ENST00000439775 TTC21BQ7Z4L5 1316 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 TTC21AQ8NDW8 1320 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 EVA1CP58658 441 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 ZRANB1Q9UGI0 708 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 AATKQ6ZMQ8 1374 aa23.11■■□□□ 1.29
SNRPD3-204ENST00000439775 MON2Q7Z3U7 1717 aa23.09■■□□□ 1.29
SNRPD3-204ENST00000439775 LARP1Q6PKG0 1096 aaKnown RBP23.09■■□□□ 1.29
SNRPD3-204ENST00000439775 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
SNRPD3-204ENST00000439775 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.29
SNRPD3-204ENST00000439775 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
SNRPD3-204ENST00000439775 SRCAPQ6ZRS2 3230 aa23.07■■□□□ 1.28
SNRPD3-204ENST00000439775 RGPD1P0DJD0 1748 aa23.07■■□□□ 1.28
SNRPD3-204ENST00000439775 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
SNRPD3-204ENST00000439775 TCP11L2Q8N4U5 519 aa23.06■■□□□ 1.28
SNRPD3-204ENST00000439775 USP35Q9P2H5 1018 aa23.06■■□□□ 1.28
SNRPD3-204ENST00000439775 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
SNRPD3-204ENST00000439775 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
SNRPD3-204ENST00000439775 CRB1P82279 1406 aa23.05■■□□□ 1.28
SNRPD3-204ENST00000439775 COL18A1P39060 1754 aa23.04■■□□□ 1.28
SNRPD3-204ENST00000439775 BAG6P46379 1132 aa23.04■■□□□ 1.28
SNRPD3-204ENST00000439775 FAM182BQ5T319 152 aa23.04■■□□□ 1.28
SNRPD3-204ENST00000439775 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
SNRPD3-204ENST00000439775 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
SNRPD3-204ENST00000439775 NFAT5O94916 1531 aa23.03■■□□□ 1.28
SNRPD3-204ENST00000439775 ABCC6O95255 1503 aa23.03■■□□□ 1.28
SNRPD3-204ENST00000439775 TNS1Q9HBL0 1735 aaKnown RBP23.02■■□□□ 1.28
SNRPD3-204ENST00000439775 USP31Q70CQ4 1352 aa23.01■■□□□ 1.27
SNRPD3-204ENST00000439775 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
SNRPD3-204ENST00000439775 FAM196AQ6ZSG2 479 aa23.01■■□□□ 1.27
SNRPD3-204ENST00000439775 ARHGEF25Q86VW2 580 aa23.01■■□□□ 1.27
SNRPD3-204ENST00000439775 PARP4Q9UKK3 1724 aaKnown RBP23.01■■□□□ 1.27
SNRPD3-204ENST00000439775 TESK2Q96S53 571 aa23■■□□□ 1.27
SNRPD3-204ENST00000439775 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
SNRPD3-204ENST00000439775 EDC4Q6P2E9 1401 aaKnown RBP22.99■■□□□ 1.27
SNRPD3-204ENST00000439775 HDGFL2Q7Z4V5 671 aaPredicted RBP22.99■■□□□ 1.27
SNRPD3-204ENST00000439775 SLC24A1O60721 1099 aa22.98■■□□□ 1.27
SNRPD3-204ENST00000439775 PDE3BQ13370 1112 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms