RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 GLI3P10071 1580 aa19.48■□□□□ 0.71
GARNL3-206ENST00000439286 PLEKHG3A1L390 1219 aa19.47■□□□□ 0.71
GARNL3-206ENST00000439286 NUTM2GQ5VZR2 741 aa19.47■□□□□ 0.71
GARNL3-206ENST00000439286 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.47■□□□□ 0.71
GARNL3-206ENST00000439286 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
GARNL3-206ENST00000439286 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
GARNL3-206ENST00000439286 EVA1CP58658 441 aa19.46■□□□□ 0.71
GARNL3-206ENST00000439286 ABTB2Q8N961 1025 aa19.46■□□□□ 0.71
GARNL3-206ENST00000439286 ZC3H6P61129 1189 aaKnown RBP19.45■□□□□ 0.7
GARNL3-206ENST00000439286 ATP7BP35670 1465 aa19.45■□□□□ 0.7
GARNL3-206ENST00000439286 DEFB132Q7Z7B7 95 aa19.44■□□□□ 0.7
GARNL3-206ENST00000439286 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
GARNL3-206ENST00000439286 SPATA31A5Q5VU36 1347 aa19.44■□□□□ 0.7
GARNL3-206ENST00000439286 SPATA31A7Q8IWB4 1347 aa19.44■□□□□ 0.7
GARNL3-206ENST00000439286 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
GARNL3-206ENST00000439286 BAG6P46379 1132 aa19.43■□□□□ 0.7
GARNL3-206ENST00000439286 CHRNA2Q15822 529 aa19.43■□□□□ 0.7
GARNL3-206ENST00000439286 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
GARNL3-206ENST00000439286 KIAA0232Q92628 1395 aa19.43■□□□□ 0.7
GARNL3-206ENST00000439286 NEUROD1Q13562 356 aa19.42■□□□□ 0.7
GARNL3-206ENST00000439286 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
GARNL3-206ENST00000439286 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
GARNL3-206ENST00000439286 NWD2Q9ULI1 1742 aa19.4■□□□□ 0.7
GARNL3-206ENST00000439286 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
GARNL3-206ENST00000439286 TRPM3Q9HCF6 1732 aaPredicted RBP19.39■□□□□ 0.69
GARNL3-206ENST00000439286 PLCH1Q4KWH8 1693 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 SPATA31A1Q5TZJ5 1347 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 PPIP5K1Q6PFW1 1433 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 CABP1Q9NZU7 370 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
GARNL3-206ENST00000439286 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
GARNL3-206ENST00000439286 ARHGEF28Q8N1W1 1705 aaKnown RBP19.37■□□□□ 0.69
GARNL3-206ENST00000439286 ALS2Q96Q42 1657 aa19.36■□□□□ 0.69
GARNL3-206ENST00000439286 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
GARNL3-206ENST00000439286 GCP02774 474 aa19.35■□□□□ 0.69
GARNL3-206ENST00000439286 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
GARNL3-206ENST00000439286 FAM182BQ5T319 152 aa19.35■□□□□ 0.69
GARNL3-206ENST00000439286 ABCA3Q99758 1704 aa19.34■□□□□ 0.69
GARNL3-206ENST00000439286 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
GARNL3-206ENST00000439286 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
GARNL3-206ENST00000439286 NLRP6P59044 892 aa19.34■□□□□ 0.69
GARNL3-206ENST00000439286 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
GARNL3-206ENST00000439286 ROCK2O75116 1388 aaKnown RBP19.33■□□□□ 0.69
GARNL3-206ENST00000439286 ITSN1Q15811 1721 aa19.33■□□□□ 0.68
GARNL3-206ENST00000439286 BARGINQ6ZT62 677 aa19.32■□□□□ 0.68
GARNL3-206ENST00000439286 TCP11L2Q8N4U5 519 aa19.32■□□□□ 0.68
GARNL3-206ENST00000439286 CPDO75976 1380 aa19.32■□□□□ 0.68
GARNL3-206ENST00000439286 USP19O94966 1318 aa19.31■□□□□ 0.68
GARNL3-206ENST00000439286 EN1Q05925 392 aaPredicted RBP19.31■□□□□ 0.68
GARNL3-206ENST00000439286 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
GARNL3-206ENST00000439286 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
GARNL3-206ENST00000439286 THRAP3Q9Y2W1 955 aaKnown RBP19.3■□□□□ 0.68
GARNL3-206ENST00000439286 SSH2Q76I76 1423 aa19.29■□□□□ 0.68
GARNL3-206ENST00000439286 NRAPQ86VF7 1730 aa19.28■□□□□ 0.68
GARNL3-206ENST00000439286 TRIM37O94972 964 aa19.28■□□□□ 0.68
GARNL3-206ENST00000439286 USP6P35125 1406 aa19.26■□□□□ 0.67
GARNL3-206ENST00000439286 EP400Q96L91 3159 aa19.26■□□□□ 0.67
GARNL3-206ENST00000439286 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
GARNL3-206ENST00000439286 APBA3O96018 575 aa19.26■□□□□ 0.67
GARNL3-206ENST00000439286 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
GARNL3-206ENST00000439286 KCNH5Q8NCM2 988 aa19.25■□□□□ 0.67
GARNL3-206ENST00000439286 BRWD3Q6RI45 1802 aa19.25■□□□□ 0.67
GARNL3-206ENST00000439286 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
GARNL3-206ENST00000439286 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
GARNL3-206ENST00000439286 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
GARNL3-206ENST00000439286 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
GARNL3-206ENST00000439286 TTC21BQ7Z4L5 1316 aa19.23■□□□□ 0.67
GARNL3-206ENST00000439286 PHRF1Q9P1Y6 1649 aaKnown RBP19.22■□□□□ 0.67
GARNL3-206ENST00000439286 AATKQ6ZMQ8 1374 aa19.21■□□□□ 0.67
GARNL3-206ENST00000439286 CAMTA1Q9Y6Y1 1673 aa19.21■□□□□ 0.67
GARNL3-206ENST00000439286 SOX12O15370 315 aa19.21■□□□□ 0.67
GARNL3-206ENST00000439286 CRYBG1Q9Y4K1 1723 aa19.21■□□□□ 0.67
GARNL3-206ENST00000439286 TTC21AQ8NDW8 1320 aa19.21■□□□□ 0.67
GARNL3-206ENST00000439286 NRKQ7Z2Y5 1582 aa19.2■□□□□ 0.66
GARNL3-206ENST00000439286 CRB1P82279 1406 aa19.2■□□□□ 0.66
GARNL3-206ENST00000439286 CSB-PGBD3P0DP91 1061 aa19.2■□□□□ 0.66
GARNL3-206ENST00000439286 R3HDM1Q15032 1099 aaKnown RBP19.2■□□□□ 0.66
GARNL3-206ENST00000439286 CAMKK2Q96RR4 588 aa19.2■□□□□ 0.66
GARNL3-206ENST00000439286 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
GARNL3-206ENST00000439286 DISP2A7MBM2 1401 aa19.19■□□□□ 0.66
GARNL3-206ENST00000439286 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
GARNL3-206ENST00000439286 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
GARNL3-206ENST00000439286 KTN1Q86UP2 1357 aaKnown RBP19.19■□□□□ 0.66
GARNL3-206ENST00000439286 COL5A2P05997 1499 aaPredicted RBP19.18■□□□□ 0.66
GARNL3-206ENST00000439286 DDB1Q16531 1140 aa19.18■□□□□ 0.66
GARNL3-206ENST00000439286 NBPF14Q5TI25 921 aa19.18■□□□□ 0.66
GARNL3-206ENST00000439286 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
GARNL3-206ENST00000439286 QRICH2Q9H0J4 1663 aa19.17■□□□□ 0.66
GARNL3-206ENST00000439286 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
GARNL3-206ENST00000439286 ARHGEF25Q86VW2 580 aa19.17■□□□□ 0.66
GARNL3-206ENST00000439286 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
GARNL3-206ENST00000439286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.16■□□□□ 0.66
GARNL3-206ENST00000439286 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
GARNL3-206ENST00000439286 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
GARNL3-206ENST00000439286 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.66
GARNL3-206ENST00000439286 SLIT3O75094 1523 aa19.13■□□□□ 0.65
GARNL3-206ENST00000439286 RGPD1P0DJD0 1748 aa19.12■□□□□ 0.65
GARNL3-206ENST00000439286 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
GARNL3-206ENST00000439286 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms