RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 NME9Q86XW9 330 aa24.8■■□□□ 1.56
MTA1-208ENST00000438610 ZBED9Q6R2W3 1325 aa24.8■■□□□ 1.56
MTA1-208ENST00000438610 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
MTA1-208ENST00000438610 CFAP53Q96M91 514 aa24.78■■□□□ 1.56
MTA1-208ENST00000438610 ADAMTS8Q9UP79 889 aa24.78■■□□□ 1.56
MTA1-208ENST00000438610 TTC21AQ8NDW8 1320 aa24.77■■□□□ 1.56
MTA1-208ENST00000438610 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
MTA1-208ENST00000438610 NRKQ7Z2Y5 1582 aa24.77■■□□□ 1.56
MTA1-208ENST00000438610 TMEM94Q12767 1356 aa24.77■■□□□ 1.56
MTA1-208ENST00000438610 COG3Q96JB2 828 aa24.77■■□□□ 1.56
MTA1-208ENST00000438610 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
MTA1-208ENST00000438610 BLMP54132 1417 aaPredicted RBP24.74■■□□□ 1.55
MTA1-208ENST00000438610 DCCP43146 1447 aa24.73■■□□□ 1.55
MTA1-208ENST00000438610 ZRANB1Q9UGI0 708 aa24.73■■□□□ 1.55
MTA1-208ENST00000438610 AATKQ6ZMQ8 1374 aa24.72■■□□□ 1.55
MTA1-208ENST00000438610 ESCO1Q5FWF5 840 aa24.72■■□□□ 1.55
MTA1-208ENST00000438610 ATF3P18847 181 aa24.7■■□□□ 1.54
MTA1-208ENST00000438610 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
MTA1-208ENST00000438610 PNPLA6Q8IY17 1366 aa24.69■■□□□ 1.54
MTA1-208ENST00000438610 OVOS2A0A0J9YW53 1432 aa24.68■■□□□ 1.54
MTA1-208ENST00000438610 OVOS2Q6IE36 1432 aa24.68■■□□□ 1.54
MTA1-208ENST00000438610 USP31Q70CQ4 1352 aa24.68■■□□□ 1.54
MTA1-208ENST00000438610 CADPS2Q86UW7 1296 aa24.67■■□□□ 1.54
MTA1-208ENST00000438610 C1orf167Q5SNV9 1468 aa24.67■■□□□ 1.54
MTA1-208ENST00000438610 ZNF335Q9H4Z2 1342 aaPredicted RBP24.66■■□□□ 1.54
MTA1-208ENST00000438610 ORAI2Q96SN7 254 aa24.65■■□□□ 1.54
MTA1-208ENST00000438610 SHPRHQ149N8 1683 aa24.65■■□□□ 1.54
MTA1-208ENST00000438610 MSH6P52701 1360 aa24.65■■□□□ 1.54
MTA1-208ENST00000438610 PSME1Q06323 249 aa24.64■■□□□ 1.54
MTA1-208ENST00000438610 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.54
MTA1-208ENST00000438610 NUDCQ9Y266 331 aa24.64■■□□□ 1.53
MTA1-208ENST00000438610 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.53
MTA1-208ENST00000438610 MAP2P11137 1827 aaKnown RBP24.64■■□□□ 1.53
MTA1-208ENST00000438610 COL3A1P02461 1466 aaPredicted RBP24.63■■□□□ 1.53
MTA1-208ENST00000438610 MST1RQ04912 1400 aa24.63■■□□□ 1.53
MTA1-208ENST00000438610 FBLN1P23142 703 aa24.63■■□□□ 1.53
MTA1-208ENST00000438610 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
MTA1-208ENST00000438610 DIAPH1O60610 1272 aaKnown RBP24.6■■□□□ 1.53
MTA1-208ENST00000438610 PIK3C2AO00443 1686 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 KIF1AQ12756 1690 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 NLRP6P59044 892 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 EMILIN1Q9Y6C2 1016 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 FOXO3O43524 673 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 PAK3O75914 559 aaPredicted RBP24.59■■□□□ 1.53
MTA1-208ENST00000438610 ABTB2Q8N961 1025 aa24.59■■□□□ 1.53
MTA1-208ENST00000438610 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.53
MTA1-208ENST00000438610 PPM1GO15355 546 aaPredicted RBP24.58■■□□□ 1.52
MTA1-208ENST00000438610 NGEFQ8N5V2 710 aa24.58■■□□□ 1.52
MTA1-208ENST00000438610 RRS1Q15050 365 aaKnown RBP24.57■■□□□ 1.52
MTA1-208ENST00000438610 U2AF1L5P0DN76 240 aaPredicted RBP24.56■■□□□ 1.52
MTA1-208ENST00000438610 U2AF1Q01081 240 aaKnown RBP eCLIP24.56■■□□□ 1.52
MTA1-208ENST00000438610 PDE3BQ13370 1112 aa24.56■■□□□ 1.52
MTA1-208ENST00000438610 USP54Q70EL1 1684 aa24.56■■□□□ 1.52
MTA1-208ENST00000438610 SENP3-EIF4A1A0A087X0R7 540 aa24.56■■□□□ 1.52
MTA1-208ENST00000438610 CCDC146Q8IYE0 955 aa24.56■■□□□ 1.52
MTA1-208ENST00000438610 RUNDC1Q96C34 613 aa24.55■■□□□ 1.52
MTA1-208ENST00000438610 KRT28Q7Z3Y7 464 aa24.53■■□□□ 1.52
MTA1-208ENST00000438610 SALL2Q9Y467 1007 aaPredicted RBP24.53■■□□□ 1.52
MTA1-208ENST00000438610 U2SURPO15042 1029 aaKnown RBP24.53■■□□□ 1.52
MTA1-208ENST00000438610 APAF1O14727 1248 aa24.52■■□□□ 1.52
MTA1-208ENST00000438610 IL13P35225 146 aa24.51■■□□□ 1.51
MTA1-208ENST00000438610 PNNQ9H307 717 aaKnown RBP24.5■■□□□ 1.51
MTA1-208ENST00000438610 NUTM2GQ5VZR2 741 aa24.5■■□□□ 1.51
MTA1-208ENST00000438610 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
MTA1-208ENST00000438610 NEFLP07196 543 aa24.49■■□□□ 1.51
MTA1-208ENST00000438610 NCBP3Q53F19 620 aaKnown RBP24.49■■□□□ 1.51
MTA1-208ENST00000438610 MAP3K19Q56UN5 1328 aa24.49■■□□□ 1.51
MTA1-208ENST00000438610 KIF24Q5T7B8 1368 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 NPHP3Q7Z494 1330 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 FCHSD2O94868 740 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 SBNO1A3KN83 1393 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
MTA1-208ENST00000438610 XPCQ01831 940 aaPredicted RBP24.47■■□□□ 1.51
MTA1-208ENST00000438610 TRPM3Q9HCF6 1732 aaPredicted RBP24.47■■□□□ 1.51
MTA1-208ENST00000438610 SOX12O15370 315 aa24.46■■□□□ 1.51
MTA1-208ENST00000438610 PLEKHF1Q96S99 279 aa24.46■■□□□ 1.51
MTA1-208ENST00000438610 TCP11L2Q8N4U5 519 aa24.46■■□□□ 1.51
MTA1-208ENST00000438610 KCNH5Q8NCM2 988 aa24.46■■□□□ 1.51
MTA1-208ENST00000438610 SUPT16HQ9Y5B9 1047 aaKnown RBP24.45■■□□□ 1.5
MTA1-208ENST00000438610 FLT4P35916 1363 aa24.44■■□□□ 1.5
MTA1-208ENST00000438610 BRINP3Q76B58 766 aa24.44■■□□□ 1.5
MTA1-208ENST00000438610 PEAK1Q9H792 1746 aa24.43■■□□□ 1.5
MTA1-208ENST00000438610 AMPHP49418 695 aa24.43■■□□□ 1.5
MTA1-208ENST00000438610 HSP90AB2PQ58FF8 381 aa24.43■■□□□ 1.5
MTA1-208ENST00000438610 IQSEC2Q5JU85 1478 aa24.42■■□□□ 1.5
MTA1-208ENST00000438610 EIF4A2Q14240 407 aaKnown RBP24.42■■□□□ 1.5
MTA1-208ENST00000438610 RSPH6AQ9H0K4 717 aa24.41■■□□□ 1.5
MTA1-208ENST00000438610 GOLGA2Q08379 1002 aa24.4■■□□□ 1.5
MTA1-208ENST00000438610 CCDC27Q2M243 656 aa24.4■■□□□ 1.5
MTA1-208ENST00000438610 USP19O94966 1318 aa24.4■■□□□ 1.5
MTA1-208ENST00000438610 CDCA7LQ96GN5 454 aa24.4■■□□□ 1.5
MTA1-208ENST00000438610 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
MTA1-208ENST00000438610 MAPK8IP3Q9UPT6 1336 aa24.39■■□□□ 1.5
MTA1-208ENST00000438610 FKBP8Q14318 412 aa24.39■■□□□ 1.49
MTA1-208ENST00000438610 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.49
MTA1-208ENST00000438610 NFAT5O94916 1531 aa24.38■■□□□ 1.49
MTA1-208ENST00000438610 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
MTA1-208ENST00000438610 RTL1A6NKG5 1358 aa24.38■■□□□ 1.49
MTA1-208ENST00000438610 SLIT3O75094 1523 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms