RNA–Protein interactions for RNA: ENST00000438258.1

EML3-205, Transcript of echinoderm microtubule associated protein like 3, human

TSL 4

Gene EML3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EML3-205	ENST00000438258	SOCS7	O14512	581 aa		28.91	■■■□□ 2.22
EML3-205	ENST00000438258	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.89	■■■□□ 2.22
EML3-205	ENST00000438258	CRYBG1	Q9Y4K1	1723 aa		28.89	■■■□□ 2.21
EML3-205	ENST00000438258	NWD2	Q9ULI1	1742 aa		28.87	■■■□□ 2.21
EML3-205	ENST00000438258	CABP1	Q9NZU7	370 aa		28.87	■■■□□ 2.21
EML3-205	ENST00000438258	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.86	■■■□□ 2.21
EML3-205	ENST00000438258	USP21	Q9UK80	565 aa		28.86	■■■□□ 2.21
EML3-205	ENST00000438258	USP47	Q96K76	1375 aa		28.85	■■■□□ 2.21
EML3-205	ENST00000438258	PLCH1	Q4KWH8	1693 aa		28.84	■■■□□ 2.21
EML3-205	ENST00000438258	RXRB	P28702	533 aa		28.84	■■■□□ 2.21
EML3-205	ENST00000438258	PUS7	Q96PZ0	661 aa	Known RBP	28.84	■■■□□ 2.21
EML3-205	ENST00000438258	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.83	■■■□□ 2.21
EML3-205	ENST00000438258	CABLES1	Q8TDN4	633 aa		28.83	■■■□□ 2.21
EML3-205	ENST00000438258	ZNF692	Q9BU19	519 aa	Predicted RBP	28.83	■■■□□ 2.21
EML3-205	ENST00000438258	ST20-MTHFS	A0A0A6YYL1	179 aa		28.82	■■■□□ 2.2
EML3-205	ENST00000438258	QTRT2	Q9H974	415 aa	Known RBP	28.82	■■■□□ 2.2
EML3-205	ENST00000438258	USP6	P35125	1406 aa		28.82	■■■□□ 2.2
EML3-205	ENST00000438258	COL14A1	Q05707	1796 aa	Known RBP	28.81	■■■□□ 2.2
EML3-205	ENST00000438258	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.81	■■■□□ 2.2
EML3-205	ENST00000438258	PLEKHG5	O94827	1062 aa		28.81	■■■□□ 2.2
EML3-205	ENST00000438258	TRPC5	Q9UL62	973 aa	Predicted RBP	28.81	■■■□□ 2.2
EML3-205	ENST00000438258	MON2	Q7Z3U7	1717 aa		28.8	■■■□□ 2.2
EML3-205	ENST00000438258	ABTB2	Q8N961	1025 aa		28.8	■■■□□ 2.2
EML3-205	ENST00000438258	RBM6	P78332	1123 aa	Known RBP	28.79	■■■□□ 2.2
EML3-205	ENST00000438258	SLIT2	O94813	1529 aa		28.78	■■■□□ 2.2
EML3-205	ENST00000438258	NINL	Q9Y2I6	1382 aa		28.76	■■■□□ 2.2
EML3-205	ENST00000438258	NLRP13	Q86W25	1043 aa		28.76	■■■□□ 2.19
EML3-205	ENST00000438258	TESK2	Q96S53	571 aa		28.76	■■■□□ 2.19
EML3-205	ENST00000438258	BCL9L	Q86UU0	1499 aa		28.75	■■■□□ 2.19
EML3-205	ENST00000438258	ATRN	O75882	1429 aa		28.75	■■■□□ 2.19
EML3-205	ENST00000438258	TMF1	P82094	1093 aa		28.74	■■■□□ 2.19
EML3-205	ENST00000438258	UNC5CL	Q8IV45	518 aa		28.74	■■■□□ 2.19
EML3-205	ENST00000438258	NRK	Q7Z2Y5	1582 aa		28.74	■■■□□ 2.19
EML3-205	ENST00000438258	KTN1	Q86UP2	1357 aa	Known RBP	28.74	■■■□□ 2.19
EML3-205	ENST00000438258	CPSF1	Q10570	1443 aa	Known RBP	28.73	■■■□□ 2.19
EML3-205	ENST00000438258	CDCA8	Q53HL2	280 aa		28.73	■■■□□ 2.19
EML3-205	ENST00000438258	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.72	■■■□□ 2.19
EML3-205	ENST00000438258	TMC1	Q8TDI8	760 aa		28.72	■■■□□ 2.19
EML3-205	ENST00000438258	PIK3C2A	O00443	1686 aa		28.72	■■■□□ 2.19
EML3-205	ENST00000438258	TTC21A	Q8NDW8	1320 aa		28.71	■■■□□ 2.19
EML3-205	ENST00000438258	NUTM2G	Q5VZR2	741 aa		28.71	■■■□□ 2.19
EML3-205	ENST00000438258	TERF2IP	Q9NYB0	399 aa		28.71	■■■□□ 2.19
EML3-205	ENST00000438258	NRAP	Q86VF7	1730 aa		28.7	■■■□□ 2.19
EML3-205	ENST00000438258	PRDM11	Q9NQV5	511 aa		28.7	■■■□□ 2.18
EML3-205	ENST00000438258	SSH2	Q76I76	1423 aa		28.69	■■■□□ 2.18
EML3-205	ENST00000438258	USP19	O94966	1318 aa		28.69	■■■□□ 2.18
EML3-205	ENST00000438258	FAM83G	A6ND36	823 aa		28.67	■■■□□ 2.18
EML3-205	ENST00000438258	NLRP6	P59044	892 aa		28.67	■■■□□ 2.18
EML3-205	ENST00000438258	TTC21B	Q7Z4L5	1316 aa		28.67	■■■□□ 2.18
EML3-205	ENST00000438258	KIAA0232	Q92628	1395 aa		28.64	■■■□□ 2.18
EML3-205	ENST00000438258	GJD4	Q96KN9	370 aa	Predicted RBP	28.64	■■■□□ 2.18
EML3-205	ENST00000438258	EDC4	Q6P2E9	1401 aa	Known RBP	28.63	■■■□□ 2.17
EML3-205	ENST00000438258	SLC12A5	Q9H2X9	1139 aa		28.63	■■■□□ 2.17
EML3-205	ENST00000438258	CD163L1	Q9NR16	1453 aa		28.63	■■■□□ 2.17
EML3-205	ENST00000438258	USP54	Q70EL1	1684 aa		28.63	■■■□□ 2.17
EML3-205	ENST00000438258	SLIT3	O75094	1523 aa		28.63	■■■□□ 2.17
EML3-205	ENST00000438258	CPD	O75976	1380 aa		28.62	■■■□□ 2.17
EML3-205	ENST00000438258	RGS12	O14924	1447 aa		28.62	■■■□□ 2.17
EML3-205	ENST00000438258	VPS72	Q15906	364 aa		28.62	■■■□□ 2.17
EML3-205	ENST00000438258	BTG4	Q9NY30	223 aa		28.62	■■■□□ 2.17
EML3-205	ENST00000438258	GC	P02774	474 aa		28.61	■■■□□ 2.17
EML3-205	ENST00000438258	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.61	■■■□□ 2.17
EML3-205	ENST00000438258	CCDC9	Q9Y3X0	531 aa	Known RBP	28.61	■■■□□ 2.17
EML3-205	ENST00000438258	ZC3H6	P61129	1189 aa	Known RBP	28.6	■■■□□ 2.17
EML3-205	ENST00000438258	GLI3	P10071	1580 aa		28.59	■■■□□ 2.17
EML3-205	ENST00000438258	KCNH5	Q8NCM2	988 aa		28.59	■■■□□ 2.17
EML3-205	ENST00000438258		A0A1W2PP64	1363 aa		28.59	■■■□□ 2.17
EML3-205	ENST00000438258	ANKRD36B	Q8N2N9	1353 aa		28.56	■■■□□ 2.16
EML3-205	ENST00000438258	LMO7	Q8WWI1	1683 aa		28.55	■■■□□ 2.16
EML3-205	ENST00000438258	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.55	■■■□□ 2.16
EML3-205	ENST00000438258	CHRNA2	Q15822	529 aa		28.54	■■■□□ 2.16
EML3-205	ENST00000438258	USP31	Q70CQ4	1352 aa		28.53	■■■□□ 2.16
EML3-205	ENST00000438258	MYOM1	P52179	1685 aa		28.53	■■■□□ 2.16
EML3-205	ENST00000438258	BRWD3	Q6RI45	1802 aa		28.51	■■■□□ 2.15
EML3-205	ENST00000438258	EVA1C	P58658	441 aa		28.51	■■■□□ 2.15
EML3-205	ENST00000438258	LTN1	O94822	1766 aa		28.5	■■■□□ 2.15
EML3-205	ENST00000438258	KIF20B	Q96Q89	1820 aa		28.49	■■■□□ 2.15
EML3-205	ENST00000438258	AATK	Q6ZMQ8	1374 aa		28.49	■■■□□ 2.15
EML3-205	ENST00000438258	ABCC6	O95255	1503 aa		28.48	■■■□□ 2.15
EML3-205	ENST00000438258	CAMTA1	Q9Y6Y1	1673 aa		28.48	■■■□□ 2.15
EML3-205	ENST00000438258	HSPA5	P11021	654 aa	Known RBP	28.48	■■■□□ 2.15
EML3-205	ENST00000438258	RGPD5	Q99666	1765 aa		28.47	■■■□□ 2.15
EML3-205	ENST00000438258	NME9	Q86XW9	330 aa		28.47	■■■□□ 2.15
EML3-205	ENST00000438258	STRN4	Q9NRL3	753 aa		28.47	■■■□□ 2.15
EML3-205	ENST00000438258	NFAT5	O94916	1531 aa		28.47	■■■□□ 2.15
EML3-205	ENST00000438258	COL18A1	P39060	1754 aa		28.47	■■■□□ 2.15
EML3-205	ENST00000438258	SPATA31A5	Q5VU36	1347 aa		28.46	■■■□□ 2.15
EML3-205	ENST00000438258	SPATA31A7	Q8IWB4	1347 aa		28.46	■■■□□ 2.15
EML3-205	ENST00000438258	ZBTB7C	A1YPR0	619 aa		28.46	■■■□□ 2.15
EML3-205	ENST00000438258	ONECUT3	O60422	494 aa	Predicted RBP	28.44	■■■□□ 2.14
EML3-205	ENST00000438258	COL5A2	P05997	1499 aa	Predicted RBP	28.43	■■■□□ 2.14
EML3-205	ENST00000438258		A0A0G2JS52	829 aa		28.43	■■■□□ 2.14
EML3-205	ENST00000438258	MYT1	Q01538	1121 aa		28.43	■■■□□ 2.14
EML3-205	ENST00000438258	SOX12	O15370	315 aa		28.42	■■■□□ 2.14
EML3-205	ENST00000438258	ARHGEF25	Q86VW2	580 aa		28.42	■■■□□ 2.14
EML3-205	ENST00000438258	OVOS2	A0A0J9YW53	1432 aa		28.42	■■■□□ 2.14
EML3-205	ENST00000438258	OVOS2	Q6IE36	1432 aa		28.42	■■■□□ 2.14
EML3-205	ENST00000438258	SEPT12	Q8IYM1	358 aa		28.41	■■■□□ 2.14
EML3-205	ENST00000438258	COG3	Q96JB2	828 aa		28.41	■■■□□ 2.14
EML3-205	ENST00000438258	SPATA31A1	Q5TZJ5	1347 aa		28.41	■■■□□ 2.14

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