RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 GGNBP2Q9H3C7 697 aa29.02■■■□□ 2.24
YBX1-203ENST00000436427 BRINP3Q76B58 766 aa29■■■□□ 2.23
YBX1-203ENST00000436427 SSH2Q76I76 1423 aa29■■■□□ 2.23
YBX1-203ENST00000436427 MORC1Q86VD1 984 aa28.99■■■□□ 2.23
YBX1-203ENST00000436427 NME9Q86XW9 330 aa28.99■■■□□ 2.23
YBX1-203ENST00000436427 PAK3O75914 559 aaPredicted RBP28.99■■■□□ 2.23
YBX1-203ENST00000436427 TTC21AQ8NDW8 1320 aa28.98■■■□□ 2.23
YBX1-203ENST00000436427 XPCQ01831 940 aaPredicted RBP28.98■■■□□ 2.23
YBX1-203ENST00000436427 ANKRD26Q9UPS8 1709 aa28.97■■■□□ 2.23
YBX1-203ENST00000436427 BRD4O60885 1362 aaPredicted RBP28.96■■■□□ 2.23
YBX1-203ENST00000436427 MYBBP1AQ9BQG0 1328 aaKnown RBP28.96■■■□□ 2.23
YBX1-203ENST00000436427 NPHP3Q7Z494 1330 aa28.95■■■□□ 2.22
YBX1-203ENST00000436427 KRT28Q7Z3Y7 464 aa28.94■■■□□ 2.22
YBX1-203ENST00000436427 DDX17Q92841 729 aaKnown RBP28.94■■■□□ 2.22
YBX1-203ENST00000436427 TNNT2P45379 298 aaPredicted RBP28.94■■■□□ 2.22
YBX1-203ENST00000436427 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
YBX1-203ENST00000436427 CCER2I3L3R5 266 aa28.92■■■□□ 2.22
YBX1-203ENST00000436427 COG3Q96JB2 828 aa28.92■■■□□ 2.22
YBX1-203ENST00000436427 IQSEC2Q5JU85 1478 aa28.91■■■□□ 2.22
YBX1-203ENST00000436427 PIK3C2AO00443 1686 aa28.91■■■□□ 2.22
YBX1-203ENST00000436427 TOM1O60784 492 aa28.89■■■□□ 2.22
YBX1-203ENST00000436427 ABTB2Q8N961 1025 aa28.89■■■□□ 2.22
YBX1-203ENST00000436427 CERKQ8TCT0 537 aa28.89■■■□□ 2.22
YBX1-203ENST00000436427 TRPM3Q9HCF6 1732 aaPredicted RBP28.89■■■□□ 2.22
YBX1-203ENST00000436427 PPP2R1AP30153 589 aa28.89■■■□□ 2.21
YBX1-203ENST00000436427 ROBO1Q9Y6N7 1651 aa28.88■■■□□ 2.21
YBX1-203ENST00000436427 NUTM2GQ5VZR2 741 aa28.87■■■□□ 2.21
YBX1-203ENST00000436427 NLRP13Q86W25 1043 aa28.87■■■□□ 2.21
YBX1-203ENST00000436427 PXDNQ92626 1479 aa28.86■■■□□ 2.21
YBX1-203ENST00000436427 NLRP6P59044 892 aa28.86■■■□□ 2.21
YBX1-203ENST00000436427 OVOS2A0A0J9YW53 1432 aa28.86■■■□□ 2.21
YBX1-203ENST00000436427 OVOS2Q6IE36 1432 aa28.86■■■□□ 2.21
YBX1-203ENST00000436427 UBAP1LF5GYI3 381 aa28.85■■■□□ 2.21
YBX1-203ENST00000436427 LMOD2Q6P5Q4 547 aa28.85■■■□□ 2.21
YBX1-203ENST00000436427 MRS2Q9HD23 443 aa28.84■■■□□ 2.21
YBX1-203ENST00000436427 USP31Q70CQ4 1352 aa28.84■■■□□ 2.21
YBX1-203ENST00000436427 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
YBX1-203ENST00000436427 CCDC184Q52MB2 194 aa28.84■■■□□ 2.21
YBX1-203ENST00000436427 SBNO1A3KN83 1393 aa28.83■■■□□ 2.21
YBX1-203ENST00000436427 PIP4K2BP78356 416 aa28.82■■■□□ 2.2
YBX1-203ENST00000436427 SCAF1Q9H7N4 1312 aaKnown RBP28.81■■■□□ 2.2
YBX1-203ENST00000436427 ALS2Q96Q42 1657 aa28.8■■■□□ 2.2
YBX1-203ENST00000436427 SOS2Q07890 1332 aaPredicted RBP28.79■■■□□ 2.2
YBX1-203ENST00000436427 TNS3Q68CZ2 1445 aa28.79■■■□□ 2.2
YBX1-203ENST00000436427 USP54Q70EL1 1684 aa28.79■■■□□ 2.2
YBX1-203ENST00000436427 MARF1Q9Y4F3 1742 aaKnown RBP28.78■■■□□ 2.2
YBX1-203ENST00000436427 SOX12O15370 315 aa28.78■■■□□ 2.2
YBX1-203ENST00000436427 FBLN1P23142 703 aa28.77■■■□□ 2.2
YBX1-203ENST00000436427 SPATA31A3Q5VYP0 1347 aa28.76■■■□□ 2.19
YBX1-203ENST00000436427 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
YBX1-203ENST00000436427 MTHFSP49914 203 aa28.75■■■□□ 2.19
YBX1-203ENST00000436427 AATKQ6ZMQ8 1374 aa28.75■■■□□ 2.19
YBX1-203ENST00000436427 AHDC1Q5TGY3 1603 aaPredicted RBP28.75■■■□□ 2.19
YBX1-203ENST00000436427 ARHGEF10O15013 1369 aa28.73■■■□□ 2.19
YBX1-203ENST00000436427 RRS1Q15050 365 aaKnown RBP28.71■■■□□ 2.19
YBX1-203ENST00000436427 POLKQ9UBT6 870 aa28.71■■■□□ 2.19
YBX1-203ENST00000436427 MAP2P11137 1827 aaKnown RBP28.71■■■□□ 2.19
YBX1-203ENST00000436427 PPM1GO15355 546 aaPredicted RBP28.7■■■□□ 2.19
YBX1-203ENST00000436427 EMILIN1Q9Y6C2 1016 aa28.69■■■□□ 2.18
YBX1-203ENST00000436427 PHLPP1O60346 1717 aa28.69■■■□□ 2.18
YBX1-203ENST00000436427 CFAP53Q96M91 514 aa28.69■■■□□ 2.18
YBX1-203ENST00000436427 USP19O94966 1318 aa28.68■■■□□ 2.18
YBX1-203ENST00000436427 KCNH5Q8NCM2 988 aa28.68■■■□□ 2.18
YBX1-203ENST00000436427 SLIT3O75094 1523 aa28.67■■■□□ 2.18
YBX1-203ENST00000436427 SMG6Q86US8 1419 aaKnown RBP28.66■■■□□ 2.18
YBX1-203ENST00000436427 MED1Q15648 1581 aaPredicted RBP28.66■■■□□ 2.18
YBX1-203ENST00000436427 FAM9BQ8IZU0 186 aa28.65■■■□□ 2.18
YBX1-203ENST00000436427 LRRC59Q96AG4 307 aaKnown RBP28.65■■■□□ 2.18
YBX1-203ENST00000436427 NFAT5O94916 1531 aa28.65■■■□□ 2.18
YBX1-203ENST00000436427 GCP02774 474 aa28.64■■■□□ 2.18
YBX1-203ENST00000436427 MAP3K19Q56UN5 1328 aa28.63■■■□□ 2.17
YBX1-203ENST00000436427 CABLES1Q8TDN4 633 aa28.63■■■□□ 2.17
YBX1-203ENST00000436427 PNISRQ8TF01 805 aaKnown RBP28.63■■■□□ 2.17
YBX1-203ENST00000436427 PHRF1Q9P1Y6 1649 aaKnown RBP28.62■■■□□ 2.17
YBX1-203ENST00000436427 COL16A1Q07092 1604 aaPredicted RBP28.61■■■□□ 2.17
YBX1-203ENST00000436427 CDK12Q9NYV4 1490 aaPredicted RBP28.61■■■□□ 2.17
YBX1-203ENST00000436427 ZBTB7CA1YPR0 619 aa28.59■■■□□ 2.17
YBX1-203ENST00000436427 AMPHP49418 695 aa28.59■■■□□ 2.17
YBX1-203ENST00000436427 PEAK1Q9H792 1746 aa28.59■■■□□ 2.17
YBX1-203ENST00000436427 CRYBG1Q9Y4K1 1723 aa28.59■■■□□ 2.17
YBX1-203ENST00000436427 LTN1O94822 1766 aa28.59■■■□□ 2.17
YBX1-203ENST00000436427 WDR43Q15061 677 aaKnown RBP eCLIP28.59■■■□□ 2.17
YBX1-203ENST00000436427 PNPLA6Q8IY17 1366 aa28.58■■■□□ 2.17
YBX1-203ENST00000436427 COL3A1P02461 1466 aaPredicted RBP28.58■■■□□ 2.17
YBX1-203ENST00000436427 HAP1P54257 671 aaPredicted RBP28.57■■■□□ 2.16
YBX1-203ENST00000436427 FLT4P35916 1363 aa28.56■■■□□ 2.16
YBX1-203ENST00000436427 INSRP06213 1382 aa28.55■■■□□ 2.16
YBX1-203ENST00000436427 ZC3H6P61129 1189 aaKnown RBP28.55■■■□□ 2.16
YBX1-203ENST00000436427 YTHDC1Q96MU7 727 aaKnown RBP28.55■■■□□ 2.16
YBX1-203ENST00000436427 SHPRHQ149N8 1683 aa28.55■■■□□ 2.16
YBX1-203ENST00000436427 DIAPH1O60610 1272 aaKnown RBP28.54■■■□□ 2.16
YBX1-203ENST00000436427 KIF24Q5T7B8 1368 aa28.54■■■□□ 2.16
YBX1-203ENST00000436427 ABCA3Q99758 1704 aa28.53■■■□□ 2.16
YBX1-203ENST00000436427 RTL1A6NKG5 1358 aa28.53■■■□□ 2.16
YBX1-203ENST00000436427 CENPBP07199 599 aaPredicted RBP28.53■■■□□ 2.16
YBX1-203ENST00000436427 HSP90AB2PQ58FF8 381 aa28.53■■■□□ 2.16
YBX1-203ENST00000436427 ARHGEF25Q86VW2 580 aa28.53■■■□□ 2.16
YBX1-203ENST00000436427 NUDCQ9Y266 331 aa28.53■■■□□ 2.16
YBX1-203ENST00000436427 HOXC9P31274 260 aa28.52■■■□□ 2.16
YBX1-203ENST00000436427 COL22A1Q8NFW1 1626 aaPredicted RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms