RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 EXOSC9Q06265 439 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
CLSTN1-203ENST00000435891 WAPLQ7Z5K2 1190 aa13.34□□□□□ -0.27
CLSTN1-203ENST00000435891 NFKBIBQ15653 356 aa13.33□□□□□ -0.27
CLSTN1-203ENST00000435891 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.28
CLSTN1-203ENST00000435891 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
CLSTN1-203ENST00000435891 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
CLSTN1-203ENST00000435891 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 ALKQ9UM73 1620 aa13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
CLSTN1-203ENST00000435891 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 MVPQ14764 893 aaKnown RBP13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 SMC4Q9NTJ3 1288 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 TRIM27P14373 513 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 RIPK4P57078 832 aa13.31□□□□□ -0.28
CLSTN1-203ENST00000435891 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
CLSTN1-203ENST00000435891 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-203ENST00000435891 DIAPH1O60610 1272 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-203ENST00000435891 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-203ENST00000435891 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-203ENST00000435891 MLECQ14165 292 aa13.29□□□□□ -0.28
CLSTN1-203ENST00000435891 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-203ENST00000435891 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-203ENST00000435891 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
CLSTN1-203ENST00000435891 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
CLSTN1-203ENST00000435891 NOB1Q9ULX3 412 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-203ENST00000435891 MED14O60244 1454 aa13.27□□□□□ -0.28
CLSTN1-203ENST00000435891 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
CLSTN1-203ENST00000435891 ANKRD26Q9UPS8 1709 aa13.27□□□□□ -0.29
CLSTN1-203ENST00000435891 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.29
CLSTN1-203ENST00000435891 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.29
CLSTN1-203ENST00000435891 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 AAMPQ13685 434 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 ITPRIPQ8IWB1 547 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 HMOX1P09601 288 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 THUMPD2Q9BTF0 503 aaKnown RBP13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
CLSTN1-203ENST00000435891 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
CLSTN1-203ENST00000435891 ATF7IPQ6VMQ6 1270 aa13.25□□□□□ -0.29
CLSTN1-203ENST00000435891 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
CLSTN1-203ENST00000435891 EMILIN1Q9Y6C2 1016 aa13.25□□□□□ -0.29
CLSTN1-203ENST00000435891 LRRC7Q96NW7 1537 aa13.25□□□□□ -0.29
CLSTN1-203ENST00000435891 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
CLSTN1-203ENST00000435891 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
CLSTN1-203ENST00000435891 NME9Q86XW9 330 aa13.23□□□□□ -0.29
CLSTN1-203ENST00000435891 IL16Q14005 1332 aa13.23□□□□□ -0.29
CLSTN1-203ENST00000435891 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
CLSTN1-203ENST00000435891 FCHSD2O94868 740 aa13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 GSE1Q14687 1217 aa13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 TXNDC2Q86VQ3 553 aa13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 ARXQ96QS3 562 aa13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 METP08581 1390 aa13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-203ENST00000435891 DIP2BQ9P265 1576 aa13.21□□□□□ -0.29
CLSTN1-203ENST00000435891 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
CLSTN1-203ENST00000435891 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.29
CLSTN1-203ENST00000435891 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.29
CLSTN1-203ENST00000435891 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.3
CLSTN1-203ENST00000435891 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.3
CLSTN1-203ENST00000435891 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
CLSTN1-203ENST00000435891 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 ELL2O00472 640 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 SPATA31D1Q6ZQQ2 1576 aa13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 PPIP5K1Q6PFW1 1433 aa13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 ATP7BP35670 1465 aa13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 NAP1L5Q96NT1 182 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-203ENST00000435891 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 IL13P35225 146 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
CLSTN1-203ENST00000435891 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
CLSTN1-203ENST00000435891 AGLP35573 1532 aa13.17□□□□□ -0.3
CLSTN1-203ENST00000435891 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
CLSTN1-203ENST00000435891 KIF16BQ96L93 1317 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 277.5 ms