RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 FAM182BQ5T319 152 aa19.8■□□□□ 0.76
PTPN7-203ENST00000435759 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.79■□□□□ 0.76
PTPN7-203ENST00000435759 A0A0G2JS52 829 aa19.79■□□□□ 0.76
PTPN7-203ENST00000435759 PLEKHG3A1L390 1219 aa19.79■□□□□ 0.76
PTPN7-203ENST00000435759 ZC3H6P61129 1189 aaKnown RBP19.79■□□□□ 0.76
PTPN7-203ENST00000435759 MYT1Q01538 1121 aa19.79■□□□□ 0.76
PTPN7-203ENST00000435759 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
PTPN7-203ENST00000435759 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
PTPN7-203ENST00000435759 TRPM3Q9HCF6 1732 aaPredicted RBP19.79■□□□□ 0.76
PTPN7-203ENST00000435759 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
PTPN7-203ENST00000435759 PRDM11Q9NQV5 511 aa19.78■□□□□ 0.76
PTPN7-203ENST00000435759 BLMP54132 1417 aaPredicted RBP19.77■□□□□ 0.76
PTPN7-203ENST00000435759 CABP2Q9NPB3 220 aa19.77■□□□□ 0.76
PTPN7-203ENST00000435759 ATP7BP35670 1465 aa19.77■□□□□ 0.76
PTPN7-203ENST00000435759 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
PTPN7-203ENST00000435759 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
PTPN7-203ENST00000435759 KIAA0232Q92628 1395 aa19.75■□□□□ 0.75
PTPN7-203ENST00000435759 ALS2Q96Q42 1657 aa19.75■□□□□ 0.75
PTPN7-203ENST00000435759 PLCH1Q4KWH8 1693 aa19.74■□□□□ 0.75
PTPN7-203ENST00000435759 BRWD3Q6RI45 1802 aa19.74■□□□□ 0.75
PTPN7-203ENST00000435759 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
PTPN7-203ENST00000435759 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
PTPN7-203ENST00000435759 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
PTPN7-203ENST00000435759 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
PTPN7-203ENST00000435759 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
PTPN7-203ENST00000435759 STRN4Q9NRL3 753 aa19.73■□□□□ 0.75
PTPN7-203ENST00000435759 NEUROD1Q13562 356 aa19.72■□□□□ 0.75
PTPN7-203ENST00000435759 ARHGEF28Q8N1W1 1705 aaKnown RBP19.72■□□□□ 0.75
PTPN7-203ENST00000435759 CENPJQ9HC77 1338 aaPredicted RBP19.72■□□□□ 0.75
PTPN7-203ENST00000435759 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
PTPN7-203ENST00000435759 CABP1Q9NZU7 370 aa19.7■□□□□ 0.74
PTPN7-203ENST00000435759 SPATA31A1Q5TZJ5 1347 aa19.7■□□□□ 0.74
PTPN7-203ENST00000435759 USP35Q9P2H5 1018 aa19.69■□□□□ 0.74
PTPN7-203ENST00000435759 EVA1CP58658 441 aa19.68■□□□□ 0.74
PTPN7-203ENST00000435759 COL14A1Q05707 1796 aaKnown RBP19.67■□□□□ 0.74
PTPN7-203ENST00000435759 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
PTPN7-203ENST00000435759 LARP1Q6PKG0 1096 aaKnown RBP19.67■□□□□ 0.74
PTPN7-203ENST00000435759 NRAPQ86VF7 1730 aa19.67■□□□□ 0.74
PTPN7-203ENST00000435759 GCP02774 474 aa19.66■□□□□ 0.74
PTPN7-203ENST00000435759 PPIP5K1Q6PFW1 1433 aa19.66■□□□□ 0.74
PTPN7-203ENST00000435759 PSDA5PKW4 1024 aaPredicted RBP19.64■□□□□ 0.73
PTPN7-203ENST00000435759 BAG6P46379 1132 aa19.64■□□□□ 0.73
PTPN7-203ENST00000435759 NLRP13Q86W25 1043 aa19.64■□□□□ 0.73
PTPN7-203ENST00000435759 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
PTPN7-203ENST00000435759 USP19O94966 1318 aa19.63■□□□□ 0.73
PTPN7-203ENST00000435759 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
PTPN7-203ENST00000435759 ZBTB7CA1YPR0 619 aa19.61■□□□□ 0.73
PTPN7-203ENST00000435759 TRIM37O94972 964 aa19.61■□□□□ 0.73
PTPN7-203ENST00000435759 NLRP6P59044 892 aa19.61■□□□□ 0.73
PTPN7-203ENST00000435759 CAMTA1Q9Y6Y1 1673 aa19.6■□□□□ 0.73
PTPN7-203ENST00000435759 EZH2Q15910 746 aaKnown RBP19.6■□□□□ 0.73
PTPN7-203ENST00000435759 CPDO75976 1380 aa19.59■□□□□ 0.73
PTPN7-203ENST00000435759 BARGINQ6ZT62 677 aa19.59■□□□□ 0.73
PTPN7-203ENST00000435759 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
PTPN7-203ENST00000435759 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
PTPN7-203ENST00000435759 FAM196AQ6ZSG2 479 aa19.58■□□□□ 0.72
PTPN7-203ENST00000435759 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
PTPN7-203ENST00000435759 TOPAZ1Q8N9V7 1692 aa19.58■□□□□ 0.72
PTPN7-203ENST00000435759 ITSN1Q15811 1721 aa19.57■□□□□ 0.72
PTPN7-203ENST00000435759 PDE3BQ13370 1112 aa19.57■□□□□ 0.72
PTPN7-203ENST00000435759 CAMKK2Q96RR4 588 aa19.57■□□□□ 0.72
PTPN7-203ENST00000435759 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
PTPN7-203ENST00000435759 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
PTPN7-203ENST00000435759 APBA3O96018 575 aa19.55■□□□□ 0.72
PTPN7-203ENST00000435759 USP6P35125 1406 aa19.55■□□□□ 0.72
PTPN7-203ENST00000435759 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
PTPN7-203ENST00000435759 THSD7AQ9UPZ6 1657 aa19.55■□□□□ 0.72
PTPN7-203ENST00000435759 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
PTPN7-203ENST00000435759 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
PTPN7-203ENST00000435759 SOX12O15370 315 aa19.52■□□□□ 0.72
PTPN7-203ENST00000435759 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
PTPN7-203ENST00000435759 BRD4O60885 1362 aaPredicted RBP19.52■□□□□ 0.72
PTPN7-203ENST00000435759 NRKQ7Z2Y5 1582 aa19.52■□□□□ 0.71
PTPN7-203ENST00000435759 THRAP3Q9Y2W1 955 aaKnown RBP19.51■□□□□ 0.71
PTPN7-203ENST00000435759 ARHGEF25Q86VW2 580 aa19.5■□□□□ 0.71
PTPN7-203ENST00000435759 COL5A2P05997 1499 aaPredicted RBP19.49■□□□□ 0.71
PTPN7-203ENST00000435759 AATKQ6ZMQ8 1374 aa19.49■□□□□ 0.71
PTPN7-203ENST00000435759 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
PTPN7-203ENST00000435759 TOM1L2Q6ZVM7 507 aa19.48■□□□□ 0.71
PTPN7-203ENST00000435759 LMO7Q8WWI1 1683 aa19.48■□□□□ 0.71
PTPN7-203ENST00000435759 DISP2A7MBM2 1401 aa19.48■□□□□ 0.71
PTPN7-203ENST00000435759 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
PTPN7-203ENST00000435759 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
PTPN7-203ENST00000435759 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
PTPN7-203ENST00000435759 CRB1P82279 1406 aa19.45■□□□□ 0.7
PTPN7-203ENST00000435759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPN7-203ENST00000435759 CPSF1Q10570 1443 aaKnown RBP19.44■□□□□ 0.7
PTPN7-203ENST00000435759 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
PTPN7-203ENST00000435759 SLIT3O75094 1523 aa19.44■□□□□ 0.7
PTPN7-203ENST00000435759 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
PTPN7-203ENST00000435759 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
PTPN7-203ENST00000435759 KCNH5Q8NCM2 988 aa19.43■□□□□ 0.7
PTPN7-203ENST00000435759 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
PTPN7-203ENST00000435759 DDB1Q16531 1140 aa19.42■□□□□ 0.7
PTPN7-203ENST00000435759 NME9Q86XW9 330 aa19.42■□□□□ 0.7
PTPN7-203ENST00000435759 WDR17Q8IZU2 1322 aa19.42■□□□□ 0.7
PTPN7-203ENST00000435759 TTC21AQ8NDW8 1320 aa19.42■□□□□ 0.7
PTPN7-203ENST00000435759 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
PTPN7-203ENST00000435759 TNS1Q9HBL0 1735 aaKnown RBP19.4■□□□□ 0.7
PTPN7-203ENST00000435759 CSB-PGBD3P0DP91 1061 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms