RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 CCDC47Q96A33 483 aaKnown RBP19.04■□□□□ 0.64
NEDD4-202ENST00000435532 SLC3A2P08195 630 aaKnown RBP19.03■□□□□ 0.64
NEDD4-202ENST00000435532 CADPS2Q86UW7 1296 aa19.03■□□□□ 0.64
NEDD4-202ENST00000435532 HDGFL1Q5TGJ6 251 aa19.03■□□□□ 0.64
NEDD4-202ENST00000435532 STARD3NLO95772 234 aa19.02■□□□□ 0.64
NEDD4-202ENST00000435532 MSH6P52701 1360 aa19.02■□□□□ 0.64
NEDD4-202ENST00000435532 PHF14O94880 888 aa19.02■□□□□ 0.64
NEDD4-202ENST00000435532 RALYLQ86SE5 291 aaKnown RBP19.02■□□□□ 0.63
NEDD4-202ENST00000435532 TPM2P07951 284 aa19.02■□□□□ 0.63
NEDD4-202ENST00000435532 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.63
NEDD4-202ENST00000435532 CCDC43Q96MW1 224 aaKnown RBP19.02■□□□□ 0.63
NEDD4-202ENST00000435532 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
NEDD4-202ENST00000435532 CEP89Q96ST8 783 aa19.01■□□□□ 0.63
NEDD4-202ENST00000435532 FYB1O15117 783 aa19.01■□□□□ 0.63
NEDD4-202ENST00000435532 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
NEDD4-202ENST00000435532 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
NEDD4-202ENST00000435532 MSNP26038 577 aaKnown RBP19■□□□□ 0.63
NEDD4-202ENST00000435532 ABCC5O15440 1437 aa19■□□□□ 0.63
NEDD4-202ENST00000435532 TPD52L1Q16890 204 aaPredicted RBP19■□□□□ 0.63
NEDD4-202ENST00000435532 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
NEDD4-202ENST00000435532 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
NEDD4-202ENST00000435532 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
NEDD4-202ENST00000435532 BTBD11A6QL63 1104 aa19■□□□□ 0.63
NEDD4-202ENST00000435532 TMOD3Q9NYL9 352 aa18.99■□□□□ 0.63
NEDD4-202ENST00000435532 CCDC158Q5M9N0 1113 aa18.99■□□□□ 0.63
NEDD4-202ENST00000435532 INTS3Q68E01 1043 aaKnown RBP18.99■□□□□ 0.63
NEDD4-202ENST00000435532 WDR7Q9Y4E6 1490 aa18.99■□□□□ 0.63
NEDD4-202ENST00000435532 ADAMTS8Q9UP79 889 aa18.99■□□□□ 0.63
NEDD4-202ENST00000435532 CREBRFQ8IUR6 639 aa18.98■□□□□ 0.63
NEDD4-202ENST00000435532 WAPLQ7Z5K2 1190 aa18.98■□□□□ 0.63
NEDD4-202ENST00000435532 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
NEDD4-202ENST00000435532 TTC39AQ5SRH9 613 aa18.98■□□□□ 0.63
NEDD4-202ENST00000435532 AMOTQ4VCS5 1084 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 MCTP1Q6DN14 999 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 CNTROBQ8N137 903 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 FAM161AQ3B820 660 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 HIP1O00291 1037 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
NEDD4-202ENST00000435532 IDI1Q13907 227 aa18.97■□□□□ 0.63
NEDD4-202ENST00000435532 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
NEDD4-202ENST00000435532 RRS1Q15050 365 aaKnown RBP18.96■□□□□ 0.63
NEDD4-202ENST00000435532 PLCH2O75038 1416 aa18.96■□□□□ 0.63
NEDD4-202ENST00000435532 SART3Q15020 963 aaKnown RBP18.96■□□□□ 0.63
NEDD4-202ENST00000435532 SAFBQ15424 915 aaKnown RBP eCLIP18.96■□□□□ 0.63
NEDD4-202ENST00000435532 KRT28Q7Z3Y7 464 aa18.96■□□□□ 0.63
NEDD4-202ENST00000435532 MPHOSPH8Q99549 860 aa18.96■□□□□ 0.63
NEDD4-202ENST00000435532 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
NEDD4-202ENST00000435532 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
NEDD4-202ENST00000435532 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.95■□□□□ 0.624e-6■■□□□ 13.6
NEDD4-202ENST00000435532 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 BRMS1Q9HCU9 246 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 ZPR1O75312 459 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 FCHSD2O94868 740 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
NEDD4-202ENST00000435532 GNAI2P04899 355 aa18.94■□□□□ 0.62
NEDD4-202ENST00000435532 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
NEDD4-202ENST00000435532 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
NEDD4-202ENST00000435532 CT47B1P0C2W7 299 aaPredicted RBP18.94■□□□□ 0.62
NEDD4-202ENST00000435532 FSD1Q9BTV5 496 aa18.94■□□□□ 0.62
NEDD4-202ENST00000435532 XBP1P17861 261 aa18.94■□□□□ 0.62
NEDD4-202ENST00000435532 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
NEDD4-202ENST00000435532 NOC3LQ8WTT2 800 aaKnown RBP18.93■□□□□ 0.62
NEDD4-202ENST00000435532 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
NEDD4-202ENST00000435532 NCOA1Q15788 1441 aa18.93■□□□□ 0.62
NEDD4-202ENST00000435532 MYL6BP14649 208 aa18.93■□□□□ 0.62
NEDD4-202ENST00000435532 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
NEDD4-202ENST00000435532 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
NEDD4-202ENST00000435532 KDM5BQ9UGL1 1544 aa18.92■□□□□ 0.62
NEDD4-202ENST00000435532 EXOC5O00471 708 aa18.92■□□□□ 0.62
NEDD4-202ENST00000435532 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
NEDD4-202ENST00000435532 NAIPQ13075 1403 aa18.92■□□□□ 0.62
NEDD4-202ENST00000435532 FOXO3O43524 673 aa18.92■□□□□ 0.62
NEDD4-202ENST00000435532 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
NEDD4-202ENST00000435532 TSR1Q2NL82 804 aaKnown RBP18.91■□□□□ 0.62
NEDD4-202ENST00000435532 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
NEDD4-202ENST00000435532 UHRF1BP1LA0JNW5 1464 aa18.91■□□□□ 0.62
NEDD4-202ENST00000435532 PSMA5P28066 241 aa18.91■□□□□ 0.62
NEDD4-202ENST00000435532 NBPF8Q3BBV2 869 aa18.9■□□□□ 0.62
NEDD4-202ENST00000435532 IGHMBP2P38935 993 aaKnown RBP18.9■□□□□ 0.62
NEDD4-202ENST00000435532 ZSCAN25Q6NSZ9 544 aa18.9■□□□□ 0.62
NEDD4-202ENST00000435532 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
NEDD4-202ENST00000435532 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.62
NEDD4-202ENST00000435532 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.62
NEDD4-202ENST00000435532 PRM3Q9NNZ6 103 aa18.89■□□□□ 0.61
NEDD4-202ENST00000435532 TPM3P06753 285 aa18.89■□□□□ 0.61
NEDD4-202ENST00000435532 A2MP01023 1474 aa18.89■□□□□ 0.61
NEDD4-202ENST00000435532 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
NEDD4-202ENST00000435532 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
NEDD4-202ENST00000435532 TPM1P09493 284 aa18.87■□□□□ 0.61
NEDD4-202ENST00000435532 NOS1P29475 1434 aa18.87■□□□□ 0.61
NEDD4-202ENST00000435532 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
NEDD4-202ENST00000435532 NACAP1Q9BZK3 213 aa18.87■□□□□ 0.61
NEDD4-202ENST00000435532 DUOX2Q9NRD8 1548 aa18.86■□□□□ 0.61
NEDD4-202ENST00000435532 DDX11L8A8MPP1 907 aa18.86■□□□□ 0.61
NEDD4-202ENST00000435532 FOXD4L5Q5VV16 416 aaPredicted RBP18.86■□□□□ 0.61
NEDD4-202ENST00000435532 FOXD4L4Q8WXT5 416 aaPredicted RBP18.86■□□□□ 0.61
NEDD4-202ENST00000435532 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms