RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 PANK3Q9H999 370 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 ZMYM3Q14202 1370 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 MYOM1P52179 1685 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 WDR43Q15061 677 aaKnown RBP eCLIP9.06□□□□□ -0.96
GARNL3-205ENST00000435213 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 CEP83Q9Y592 693 aa9.06□□□□□ -0.96
GARNL3-205ENST00000435213 CDC42BPBQ9Y5S2 1711 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 WDR7Q9Y4E6 1490 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 ERCC6L2Q5T890 1561 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 SAMD9LQ8IVG5 1584 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 ZCCHC11Q5TAX3 1644 aaKnown RBP9.05□□□□□ -0.96
GARNL3-205ENST00000435213 TTC36A6NLP5 189 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 GOLIM4O00461 696 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 TSPY4P0CV99 314 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 TSPY10P0CW01 314 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 SH3BP1Q9Y3L3 701 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 ATP10AO60312 1499 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 NLRP1Q9C000 1473 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
GARNL3-205ENST00000435213 SLFN5Q08AF3 891 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 HS1BP3Q53T59 392 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
GARNL3-205ENST00000435213 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 GABPB1Q06547 395 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-205ENST00000435213 GZF1Q9H116 711 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-205ENST00000435213 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 USP19O94966 1318 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 MAGI2Q86UL8 1455 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 MADDQ8WXG6 1647 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 SSR1P43307 286 aaKnown RBP9.04□□□□□ -0.96
GARNL3-205ENST00000435213 MAP2K1Q02750 393 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-205ENST00000435213 PPP6R1Q9UPN7 881 aa9.04□□□□□ -0.96
GARNL3-205ENST00000435213 NPC1L1Q9UHC9 1359 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 TULP2O00295 520 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 ZNF500O60304 480 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-205ENST00000435213 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 SPHKAPQ2M3C7 1700 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 PPP2R1AP30153 589 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 NCAPGQ9BPX3 1015 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 RAI14Q9P0K7 980 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 CGNL1Q0VF96 1302 aa9.03□□□□□ -0.96
GARNL3-205ENST00000435213 ZNF526Q8TF50 670 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-205ENST00000435213 RBM28Q9NW13 759 aaKnown RBP9.03□□□□□ -0.96
GARNL3-205ENST00000435213 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.96
GARNL3-205ENST00000435213 GTF2A1P52655 376 aaPredicted RBP9.02□□□□□ -0.96
GARNL3-205ENST00000435213 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.96
GARNL3-205ENST00000435213 CCDC172P0C7W6 258 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 ZBTB9Q96C00 473 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 SEMA3FQ13275 785 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 NBPF9Q3BBW0 867 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 PRDM16Q9HAZ2 1276 aa9.02□□□□□ -0.97
GARNL3-205ENST00000435213 TRAK2O60296 914 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 UPF2Q9HAU5 1272 aaKnown RBP9.01□□□□□ -0.97
GARNL3-205ENST00000435213 ATP10BO94823 1461 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 DUOX2Q9NRD8 1548 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 CEP152O94986 1710 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 KIAA1210Q9ULL0 1709 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 PLEKHD1A6NEE1 506 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 MCM4P33991 863 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 BRPF1P55201 1214 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-205ENST00000435213 PDE3AQ14432 1141 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
GARNL3-205ENST00000435213 ABCA9Q8IUA7 1624 aa9□□□□□ -0.97
GARNL3-205ENST00000435213 MCM5P33992 734 aa9□□□□□ -0.97
GARNL3-205ENST00000435213 HMGN5P82970 282 aaKnown RBP9□□□□□ -0.97
GARNL3-205ENST00000435213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
GARNL3-205ENST00000435213 FEZ1Q99689 392 aa9□□□□□ -0.97
GARNL3-205ENST00000435213 IRF6O14896 467 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 CALRP27797 417 aaKnown RBP8.99□□□□□ -0.97
GARNL3-205ENST00000435213 CDCA8Q53HL2 280 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 ANTXR1Q9H6X2 564 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 MAFGO15525 162 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 TTC37Q6PGP7 1564 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 ATP2B3Q16720 1220 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 EP400NLQ6ZTU2 488 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 TERF2IPQ9NYB0 399 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
GARNL3-205ENST00000435213 BRMS1Q9HCU9 246 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 CAPN2P17655 700 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 MYRIPQ8NFW9 859 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 SYCP2Q9BX26 1530 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 DDX11L8A8MPP1 907 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 IGHDP01880 384 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 CASC1Q6TDU7 716 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
GARNL3-205ENST00000435213 NOL7Q9UMY1 257 aaKnown RBP8.98□□□□□ -0.97
GARNL3-205ENST00000435213 SCAF11Q99590 1463 aaKnown RBP8.97□□□□□ -0.97
GARNL3-205ENST00000435213 GLI2P10070 1586 aa8.97□□□□□ -0.97
GARNL3-205ENST00000435213 CT47A1Q5JQC4 288 aaPredicted RBP8.97□□□□□ -0.97
GARNL3-205ENST00000435213 RGL3Q3MIN7 710 aa8.97□□□□□ -0.97
GARNL3-205ENST00000435213 PRIMPOLQ96LW4 560 aa8.97□□□□□ -0.97
GARNL3-205ENST00000435213 HNRNPMP52272 730 aaKnown RBP eCLIP8.97□□□□□ -0.97
GARNL3-205ENST00000435213 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.97
GARNL3-205ENST00000435213 PDCL2Q8N4E4 241 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms