RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
NCSTN-206ENST00000435149 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
NCSTN-206ENST00000435149 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
NCSTN-206ENST00000435149 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
NCSTN-206ENST00000435149 BTG4Q9NY30 223 aa12.88□□□□□ -0.35
NCSTN-206ENST00000435149 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
NCSTN-206ENST00000435149 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
NCSTN-206ENST00000435149 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
NCSTN-206ENST00000435149 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
NCSTN-206ENST00000435149 DNAJC5GQ8N7S2 189 aa12.85□□□□□ -0.35
NCSTN-206ENST00000435149 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
NCSTN-206ENST00000435149 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
NCSTN-206ENST00000435149 ABCC5O15440 1437 aa12.84□□□□□ -0.35
NCSTN-206ENST00000435149 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
NCSTN-206ENST00000435149 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 APLP1P51693 650 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
NCSTN-206ENST00000435149 IQGAP3Q86VI3 1631 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
NCSTN-206ENST00000435149 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
NCSTN-206ENST00000435149 HFM1A2PYH4 1435 aa12.82□□□□□ -0.36
NCSTN-206ENST00000435149 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
NCSTN-206ENST00000435149 ARXQ96QS3 562 aa12.81□□□□□ -0.36
NCSTN-206ENST00000435149 MTFR1LQ9H019 292 aa12.81□□□□□ -0.36
NCSTN-206ENST00000435149 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
NCSTN-206ENST00000435149 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
NCSTN-206ENST00000435149 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
NCSTN-206ENST00000435149 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
NCSTN-206ENST00000435149 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
NCSTN-206ENST00000435149 SPATA31A1Q5TZJ5 1347 aa12.79□□□□□ -0.36
NCSTN-206ENST00000435149 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
NCSTN-206ENST00000435149 PLSCR1O15162 318 aa12.78□□□□□ -0.36
NCSTN-206ENST00000435149 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
NCSTN-206ENST00000435149 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
NCSTN-206ENST00000435149 ANKRD30AQ9BXX3 1397 aa12.78□□□□□ -0.36
NCSTN-206ENST00000435149 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
NCSTN-206ENST00000435149 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
NCSTN-206ENST00000435149 PSME1Q06323 249 aa12.77□□□□□ -0.37
NCSTN-206ENST00000435149 ZNF326Q5BKZ1 582 aaKnown RBP12.77□□□□□ -0.37
NCSTN-206ENST00000435149 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
NCSTN-206ENST00000435149 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
NCSTN-206ENST00000435149 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
NCSTN-206ENST00000435149 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
NCSTN-206ENST00000435149 SBNO1A3KN83 1393 aa12.75□□□□□ -0.37
NCSTN-206ENST00000435149 DAPK1P53355 1430 aa12.75□□□□□ -0.37
NCSTN-206ENST00000435149 E9PCH4 1651 aa12.74□□□□□ -0.37
NCSTN-206ENST00000435149 NAIPQ13075 1403 aa12.74□□□□□ -0.37
NCSTN-206ENST00000435149 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
NCSTN-206ENST00000435149 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
NCSTN-206ENST00000435149 CHIC2Q9UKJ5 165 aa12.74□□□□□ -0.37
NCSTN-206ENST00000435149 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
NCSTN-206ENST00000435149 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
NCSTN-206ENST00000435149 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
NCSTN-206ENST00000435149 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
NCSTN-206ENST00000435149 PROM2Q8N271 834 aa12.72□□□□□ -0.37
NCSTN-206ENST00000435149 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
NCSTN-206ENST00000435149 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
NCSTN-206ENST00000435149 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
NCSTN-206ENST00000435149 TECPR2O15040 1411 aa12.71□□□□□ -0.38
NCSTN-206ENST00000435149 KIF3CO14782 793 aa12.7□□□□□ -0.38
NCSTN-206ENST00000435149 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
NCSTN-206ENST00000435149 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
NCSTN-206ENST00000435149 ADCY9O60503 1353 aa12.69□□□□□ -0.38
NCSTN-206ENST00000435149 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
NCSTN-206ENST00000435149 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.386e-7■■■■□ 25.3
NCSTN-206ENST00000435149 USP35Q9P2H5 1018 aa12.69□□□□□ -0.38
NCSTN-206ENST00000435149 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
NCSTN-206ENST00000435149 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
NCSTN-206ENST00000435149 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
NCSTN-206ENST00000435149 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
NCSTN-206ENST00000435149 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
NCSTN-206ENST00000435149 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
NCSTN-206ENST00000435149 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
NCSTN-206ENST00000435149 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
NCSTN-206ENST00000435149 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.38
NCSTN-206ENST00000435149 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.38
NCSTN-206ENST00000435149 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
NCSTN-206ENST00000435149 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
NCSTN-206ENST00000435149 TXNRD1Q16881 649 aa12.64□□□□□ -0.39
NCSTN-206ENST00000435149 PTF1AQ7RTS3 328 aa12.63□□□□□ -0.39
NCSTN-206ENST00000435149 WAPLQ7Z5K2 1190 aa12.63□□□□□ -0.39
NCSTN-206ENST00000435149 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
NCSTN-206ENST00000435149 PCNTO95613 3336 aa12.63□□□□□ -0.39
NCSTN-206ENST00000435149 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 TOMM70O94826 608 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 TCP11L2Q8N4U5 519 aa12.62□□□□□ -0.39
NCSTN-206ENST00000435149 VGFO15240 615 aaPredicted RBP12.61□□□□□ -0.39
NCSTN-206ENST00000435149 POLD1P28340 1107 aa12.61□□□□□ -0.39
NCSTN-206ENST00000435149 HTRA3P83110 453 aa12.61□□□□□ -0.39
NCSTN-206ENST00000435149 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
NCSTN-206ENST00000435149 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
NCSTN-206ENST00000435149 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
NCSTN-206ENST00000435149 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
NCSTN-206ENST00000435149 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
NCSTN-206ENST00000435149 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms