RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 MAGI1Q96QZ7 1491 aaPredicted RBP11.47□□□□□ -0.57
TTR-202ENST00000432547 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
TTR-202ENST00000432547 CLASP1Q7Z460 1538 aa11.46□□□□□ -0.57
TTR-202ENST00000432547 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
TTR-202ENST00000432547 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.57
TTR-202ENST00000432547 CCDC24Q8N4L8 307 aa11.46□□□□□ -0.57
TTR-202ENST00000432547 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
TTR-202ENST00000432547 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
TTR-202ENST00000432547 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
TTR-202ENST00000432547 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
TTR-202ENST00000432547 WFS1O76024 890 aa11.44□□□□□ -0.58
TTR-202ENST00000432547 JUNDP17535 347 aa11.43□□□□□ -0.58
TTR-202ENST00000432547 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
TTR-202ENST00000432547 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
TTR-202ENST00000432547 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
TTR-202ENST00000432547 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
TTR-202ENST00000432547 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
TTR-202ENST00000432547 WNT7BP56706 349 aa11.42□□□□□ -0.58
TTR-202ENST00000432547 PCDHGC3Q9UN70 934 aa11.42□□□□□ -0.58
TTR-202ENST00000432547 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
TTR-202ENST00000432547 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
TTR-202ENST00000432547 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
TTR-202ENST00000432547 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
TTR-202ENST00000432547 CLCN1P35523 988 aa11.39□□□□□ -0.59
TTR-202ENST00000432547 SIAH2O43255 324 aa11.38□□□□□ -0.59
TTR-202ENST00000432547 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
TTR-202ENST00000432547 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
TTR-202ENST00000432547 WIPF1O43516 503 aa11.36□□□□□ -0.59
TTR-202ENST00000432547 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
TTR-202ENST00000432547 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
TTR-202ENST00000432547 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
TTR-202ENST00000432547 ALDH1A1P00352 501 aa11.34□□□□□ -0.59
TTR-202ENST00000432547 FDX1P10109 184 aa11.34□□□□□ -0.59
TTR-202ENST00000432547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTR-202ENST00000432547 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
TTR-202ENST00000432547 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
TTR-202ENST00000432547 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
TTR-202ENST00000432547 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
TTR-202ENST00000432547 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
TTR-202ENST00000432547 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
TTR-202ENST00000432547 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
TTR-202ENST00000432547 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
TTR-202ENST00000432547 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
TTR-202ENST00000432547 NDUFV2P19404 249 aa11.31□□□□□ -0.6
TTR-202ENST00000432547 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
TTR-202ENST00000432547 SH3BP2P78314 561 aa11.31□□□□□ -0.6
TTR-202ENST00000432547 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
TTR-202ENST00000432547 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
TTR-202ENST00000432547 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
TTR-202ENST00000432547 MOXD2PA6NHM9 499 aa11.29□□□□□ -0.6
TTR-202ENST00000432547 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
TTR-202ENST00000432547 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
TTR-202ENST00000432547 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
TTR-202ENST00000432547 MS4A1P11836 297 aa11.28□□□□□ -0.6
TTR-202ENST00000432547 BMP1P13497 986 aa11.28□□□□□ -0.6
TTR-202ENST00000432547 NUP160Q12769 1436 aa11.27□□□□□ -0.6
TTR-202ENST00000432547 KIFC2Q96AC6 838 aa11.27□□□□□ -0.61
TTR-202ENST00000432547 ERCC6L2Q5T890 1561 aa11.27□□□□□ -0.61
TTR-202ENST00000432547 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
TTR-202ENST00000432547 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
TTR-202ENST00000432547 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
TTR-202ENST00000432547 PTPRNQ16849 979 aa11.25□□□□□ -0.61
TTR-202ENST00000432547 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
TTR-202ENST00000432547 LINC01559Q495D7 138 aa11.24□□□□□ -0.61
TTR-202ENST00000432547 BARGINQ6ZT62 677 aa11.24□□□□□ -0.61
TTR-202ENST00000432547 BAP1Q92560 729 aa11.24□□□□□ -0.61
TTR-202ENST00000432547 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
TTR-202ENST00000432547 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
TTR-202ENST00000432547 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
TTR-202ENST00000432547 TLL2Q9Y6L7 1015 aa11.23□□□□□ -0.61
TTR-202ENST00000432547 ZMYND10O75800 440 aa11.22□□□□□ -0.61
TTR-202ENST00000432547 INSM1Q01101 510 aaPredicted RBP11.22□□□□□ -0.61
TTR-202ENST00000432547 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
TTR-202ENST00000432547 AMHR2Q16671 573 aa11.22□□□□□ -0.61
TTR-202ENST00000432547 RUSC2Q8N2Y8 1516 aa11.22□□□□□ -0.61
TTR-202ENST00000432547 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
TTR-202ENST00000432547 WASF2Q9Y6W5 498 aa11.21□□□□□ -0.61
TTR-202ENST00000432547 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.62
TTR-202ENST00000432547 CUL7Q14999 1698 aa11.2□□□□□ -0.62
TTR-202ENST00000432547 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
TTR-202ENST00000432547 TTLL12Q14166 644 aaPredicted RBP11.19□□□□□ -0.62
TTR-202ENST00000432547 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
TTR-202ENST00000432547 MTMR2Q13614 643 aa11.18□□□□□ -0.62
TTR-202ENST00000432547 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
TTR-202ENST00000432547 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
TTR-202ENST00000432547 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
TTR-202ENST00000432547 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
TTR-202ENST00000432547 PCDHB15Q9Y5E8 787 aa11.16□□□□□ -0.62
TTR-202ENST00000432547 GMPRP36959 345 aa11.15□□□□□ -0.62
TTR-202ENST00000432547 VEGFBP49765 207 aa11.15□□□□□ -0.62
TTR-202ENST00000432547 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
TTR-202ENST00000432547 MPNDQ8N594 471 aa11.15□□□□□ -0.62
TTR-202ENST00000432547 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
TTR-202ENST00000432547 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
TTR-202ENST00000432547 SPDYE5A6NIY4 337 aa11.14□□□□□ -0.63
TTR-202ENST00000432547 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
TTR-202ENST00000432547 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
TTR-202ENST00000432547 NNTQ13423 1086 aa11.14□□□□□ -0.63
TTR-202ENST00000432547 KLF16Q9BXK1 252 aaPredicted RBP11.14□□□□□ -0.63
TTR-202ENST00000432547 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms