RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 TSR2Q969E8 191 aaKnown RBP19.07■□□□□ 0.64
RFTN1-203ENST00000432519 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
RFTN1-203ENST00000432519 TCERG1O14776 1098 aaKnown RBP19.07■□□□□ 0.64
RFTN1-203ENST00000432519 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
RFTN1-203ENST00000432519 FRAT1Q92837 279 aaPredicted RBP19.07■□□□□ 0.64
RFTN1-203ENST00000432519 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
RFTN1-203ENST00000432519 TRIM35Q9UPQ4 493 aa19.06■□□□□ 0.64
RFTN1-203ENST00000432519 ADAMTS13Q76LX8 1427 aa19.06■□□□□ 0.64
RFTN1-203ENST00000432519 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
RFTN1-203ENST00000432519 PRR36Q9H6K5 1346 aa19.06■□□□□ 0.64
RFTN1-203ENST00000432519 CPSF1Q10570 1443 aaKnown RBP19.05■□□□□ 0.64
RFTN1-203ENST00000432519 ATP7BP35670 1465 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 PDE4AP27815 886 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
RFTN1-203ENST00000432519 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
RFTN1-203ENST00000432519 SLC26A8Q96RN1 970 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 COG6Q9Y2V7 657 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
RFTN1-203ENST00000432519 RLBP1P12271 317 aa19.03■□□□□ 0.64
RFTN1-203ENST00000432519 CPS1P31327 1500 aa19.03■□□□□ 0.64
RFTN1-203ENST00000432519 TECPR2O15040 1411 aa19.02■□□□□ 0.64
RFTN1-203ENST00000432519 PAK3O75914 559 aaPredicted RBP19.02■□□□□ 0.63
RFTN1-203ENST00000432519 BACH2Q9BYV9 841 aa19.02■□□□□ 0.63
RFTN1-203ENST00000432519 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.63
RFTN1-203ENST00000432519 IGHDP01880 384 aa19.01■□□□□ 0.63
RFTN1-203ENST00000432519 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
RFTN1-203ENST00000432519 FAM135BQ49AJ0 1406 aa19.01■□□□□ 0.63
RFTN1-203ENST00000432519 CANXP27824 592 aaKnown RBP19■□□□□ 0.63
RFTN1-203ENST00000432519 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
RFTN1-203ENST00000432519 HDGFP51858 240 aaKnown RBP19■□□□□ 0.63
RFTN1-203ENST00000432519 KNDC1Q76NI1 1749 aa19■□□□□ 0.63
RFTN1-203ENST00000432519 HMOX1P09601 288 aa18.99■□□□□ 0.63
RFTN1-203ENST00000432519 RRS1Q15050 365 aaKnown RBP18.99■□□□□ 0.63
RFTN1-203ENST00000432519 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
RFTN1-203ENST00000432519 CLUAP1Q96AJ1 413 aa18.99■□□□□ 0.63
RFTN1-203ENST00000432519 MAPK8IP3Q9UPT6 1336 aa18.99■□□□□ 0.63
RFTN1-203ENST00000432519 EDC4Q6P2E9 1401 aaKnown RBP18.99■□□□□ 0.63
RFTN1-203ENST00000432519 RIPK4P57078 832 aa18.99■□□□□ 0.63
RFTN1-203ENST00000432519 PDE3AQ14432 1141 aa18.99■□□□□ 0.63
RFTN1-203ENST00000432519 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.99■□□□□ 0.63
RFTN1-203ENST00000432519 PTPRUQ92729 1446 aa18.98■□□□□ 0.63
RFTN1-203ENST00000432519 PHACTR3Q96KR7 559 aa18.98■□□□□ 0.63
RFTN1-203ENST00000432519 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
RFTN1-203ENST00000432519 MS4A1P11836 297 aa18.97■□□□□ 0.63
RFTN1-203ENST00000432519 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
RFTN1-203ENST00000432519 EXOSC9Q06265 439 aaKnown RBP18.97■□□□□ 0.63
RFTN1-203ENST00000432519 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
RFTN1-203ENST00000432519 MYH16Q9H6N6 1097 aa18.97■□□□□ 0.63
RFTN1-203ENST00000432519 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
RFTN1-203ENST00000432519 CDC42BPGQ6DT37 1551 aa18.96■□□□□ 0.63
RFTN1-203ENST00000432519 C3P01024 1663 aa18.96■□□□□ 0.63
RFTN1-203ENST00000432519 PLEKHG1Q9ULL1 1385 aa18.95■□□□□ 0.62
RFTN1-203ENST00000432519 RGS3P49796 1198 aa18.95■□□□□ 0.62
RFTN1-203ENST00000432519 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
RFTN1-203ENST00000432519 THUMPD2Q9BTF0 503 aaKnown RBP18.94■□□□□ 0.62
RFTN1-203ENST00000432519 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
RFTN1-203ENST00000432519 FCHSD2O94868 740 aa18.93■□□□□ 0.62
RFTN1-203ENST00000432519 IL13P35225 146 aa18.93■□□□□ 0.62
RFTN1-203ENST00000432519 ANP32AP39687 249 aaKnown RBP18.93■□□□□ 0.62
RFTN1-203ENST00000432519 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
RFTN1-203ENST00000432519 TRHP20396 242 aaPredicted RBP18.92■□□□□ 0.62
RFTN1-203ENST00000432519 ERICH6Q7L0X2 663 aa18.92■□□□□ 0.62
RFTN1-203ENST00000432519 COG3Q96JB2 828 aa18.92■□□□□ 0.62
RFTN1-203ENST00000432519 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
RFTN1-203ENST00000432519 NOP58Q9Y2X3 529 aaKnown RBP18.91■□□□□ 0.62
RFTN1-203ENST00000432519 ACEP12821 1306 aa18.91■□□□□ 0.62
RFTN1-203ENST00000432519 AKAP12Q02952 1782 aa18.91■□□□□ 0.62
RFTN1-203ENST00000432519 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
RFTN1-203ENST00000432519 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
RFTN1-203ENST00000432519 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
RFTN1-203ENST00000432519 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
RFTN1-203ENST00000432519 FER1L4A9Z1Z3 1794 aa18.88■□□□□ 0.61
RFTN1-203ENST00000432519 SMC4Q9NTJ3 1288 aa18.88■□□□□ 0.61
RFTN1-203ENST00000432519 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
RFTN1-203ENST00000432519 TTC21BQ7Z4L5 1316 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 AATKQ6ZMQ8 1374 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 SOX12O15370 315 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 CDK12Q9NYV4 1490 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-203ENST00000432519 ARHGAP23Q9P227 1491 aa18.87■□□□□ 0.61
RFTN1-203ENST00000432519 ZNF692Q9BU19 519 aaPredicted RBP18.87■□□□□ 0.61
RFTN1-203ENST00000432519 TRIM27P14373 513 aa18.86■□□□□ 0.61
RFTN1-203ENST00000432519 SLIT1O75093 1534 aa18.86■□□□□ 0.61
RFTN1-203ENST00000432519 IL16Q14005 1332 aa18.86■□□□□ 0.61
RFTN1-203ENST00000432519 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
RFTN1-203ENST00000432519 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
RFTN1-203ENST00000432519 ZKSCAN2Q63HK3 967 aa18.85■□□□□ 0.61
RFTN1-203ENST00000432519 FAM83GA6ND36 823 aa18.84■□□□□ 0.61
RFTN1-203ENST00000432519 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
RFTN1-203ENST00000432519 PLEKHG3A1L390 1219 aa18.84■□□□□ 0.61
RFTN1-203ENST00000432519 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
RFTN1-203ENST00000432519 NOB1Q9ULX3 412 aaKnown RBP18.84■□□□□ 0.61
RFTN1-203ENST00000432519 NRKQ7Z2Y5 1582 aa18.83■□□□□ 0.61
RFTN1-203ENST00000432519 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.61
RFTN1-203ENST00000432519 DZIP1LQ8IYY4 767 aaKnown RBP18.83■□□□□ 0.6
RFTN1-203ENST00000432519 TBX22Q9Y458 520 aa18.83■□□□□ 0.6
RFTN1-203ENST00000432519 USP6P35125 1406 aa18.82■□□□□ 0.6
RFTN1-203ENST00000432519 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms