RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 NGLY1Q96IV0 654 aa20.06■□□□□ 0.8
CSNK1E-209ENST00000431632 ZNF692Q9BU19 519 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-209ENST00000431632 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
CSNK1E-209ENST00000431632 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
CSNK1E-209ENST00000431632 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
CSNK1E-209ENST00000431632 AFF2P51816 1311 aa20.04■□□□□ 0.8
CSNK1E-209ENST00000431632 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
CSNK1E-209ENST00000431632 HSPA5P11021 654 aaKnown RBP20.03■□□□□ 0.8
CSNK1E-209ENST00000431632 HAP1P54257 671 aaPredicted RBP20.03■□□□□ 0.8
CSNK1E-209ENST00000431632 ABTB2Q8N961 1025 aa20.03■□□□□ 0.8
CSNK1E-209ENST00000431632 ZNF772Q68DY9 489 aaPredicted RBP20.02■□□□□ 0.8
CSNK1E-209ENST00000431632 USP6P35125 1406 aa20.02■□□□□ 0.79
CSNK1E-209ENST00000431632 CPSF1Q10570 1443 aaKnown RBP20.01■□□□□ 0.79
CSNK1E-209ENST00000431632 ALS2Q96Q42 1657 aa20■□□□□ 0.79
CSNK1E-209ENST00000431632 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
CSNK1E-209ENST00000431632 FNBP4Q8N3X1 1017 aaPredicted RBP20■□□□□ 0.79
CSNK1E-209ENST00000431632 KTN1Q86UP2 1357 aaKnown RBP19.99■□□□□ 0.79
CSNK1E-209ENST00000431632 SSH2Q76I76 1423 aa19.99■□□□□ 0.79
CSNK1E-209ENST00000431632 TTC21BQ7Z4L5 1316 aa19.99■□□□□ 0.79
CSNK1E-209ENST00000431632 FAM83GA6ND36 823 aa19.98■□□□□ 0.79
CSNK1E-209ENST00000431632 CDCA8Q53HL2 280 aa19.98■□□□□ 0.79
CSNK1E-209ENST00000431632 NLRP6P59044 892 aa19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 QTRT2Q9H974 415 aaKnown RBP19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 USP21Q9UK80 565 aa19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 CD163L1Q9NR16 1453 aa19.97■□□□□ 0.79
CSNK1E-209ENST00000431632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.78
CSNK1E-209ENST00000431632 ZC3H6P61129 1189 aaKnown RBP19.93■□□□□ 0.78
CSNK1E-209ENST00000431632 TTC21AQ8NDW8 1320 aa19.93■□□□□ 0.78
CSNK1E-209ENST00000431632 NINLQ9Y2I6 1382 aa19.93■□□□□ 0.78
CSNK1E-209ENST00000431632 GCP02774 474 aa19.92■□□□□ 0.78
CSNK1E-209ENST00000431632 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
CSNK1E-209ENST00000431632 USP19O94966 1318 aa19.92■□□□□ 0.78
CSNK1E-209ENST00000431632 A0A1W2PP64 1363 aa19.92■□□□□ 0.78
CSNK1E-209ENST00000431632 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
CSNK1E-209ENST00000431632 AKAP12Q02952 1782 aa19.91■□□□□ 0.78
CSNK1E-209ENST00000431632 RXRBP28702 533 aa19.91■□□□□ 0.78
CSNK1E-209ENST00000431632 UNC5CLQ8IV45 518 aa19.91■□□□□ 0.78
CSNK1E-209ENST00000431632 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
CSNK1E-209ENST00000431632 NME9Q86XW9 330 aa19.9■□□□□ 0.78
CSNK1E-209ENST00000431632 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
CSNK1E-209ENST00000431632 ABCA3Q99758 1704 aa19.9■□□□□ 0.78
CSNK1E-209ENST00000431632 MARF1Q9Y4F3 1742 aaKnown RBP19.9■□□□□ 0.78
CSNK1E-209ENST00000431632 SLIT2O94813 1529 aa19.89■□□□□ 0.77
CSNK1E-209ENST00000431632 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
CSNK1E-209ENST00000431632 KIAA0232Q92628 1395 aa19.89■□□□□ 0.77
CSNK1E-209ENST00000431632 PRDM11Q9NQV5 511 aa19.89■□□□□ 0.77
CSNK1E-209ENST00000431632 TRPC5Q9UL62 973 aaPredicted RBP19.89■□□□□ 0.77
CSNK1E-209ENST00000431632 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
CSNK1E-209ENST00000431632 EDC4Q6P2E9 1401 aaKnown RBP19.87■□□□□ 0.77
CSNK1E-209ENST00000431632 ANKRD36BQ8N2N9 1353 aa19.87■□□□□ 0.77
CSNK1E-209ENST00000431632 RBM6P78332 1123 aaKnown RBP19.87■□□□□ 0.77
CSNK1E-209ENST00000431632 CRYBG1Q9Y4K1 1723 aa19.87■□□□□ 0.77
CSNK1E-209ENST00000431632 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
CSNK1E-209ENST00000431632 ATRNO75882 1429 aa19.85■□□□□ 0.77
CSNK1E-209ENST00000431632 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
CSNK1E-209ENST00000431632 CARD14Q9BXL6 1004 aa19.85■□□□□ 0.77
CSNK1E-209ENST00000431632 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
CSNK1E-209ENST00000431632 NRKQ7Z2Y5 1582 aa19.84■□□□□ 0.77
CSNK1E-209ENST00000431632 SOX12O15370 315 aa19.84■□□□□ 0.77
CSNK1E-209ENST00000431632 GJD4Q96KN9 370 aaPredicted RBP19.84■□□□□ 0.77
CSNK1E-209ENST00000431632 PHRF1Q9P1Y6 1649 aaKnown RBP19.84■□□□□ 0.77
CSNK1E-209ENST00000431632 CPDO75976 1380 aa19.83■□□□□ 0.77
CSNK1E-209ENST00000431632 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.77
CSNK1E-209ENST00000431632 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
CSNK1E-209ENST00000431632 VPS72Q15906 364 aa19.82■□□□□ 0.76
CSNK1E-209ENST00000431632 SLIT3O75094 1523 aa19.81■□□□□ 0.76
CSNK1E-209ENST00000431632 COL14A1Q05707 1796 aaKnown RBP19.8■□□□□ 0.76
CSNK1E-209ENST00000431632 FYB1O15117 783 aa19.8■□□□□ 0.76
CSNK1E-209ENST00000431632 ARHGEF25Q86VW2 580 aa19.8■□□□□ 0.76
CSNK1E-209ENST00000431632 CCDC9Q9Y3X0 531 aaKnown RBP19.8■□□□□ 0.76
CSNK1E-209ENST00000431632 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
CSNK1E-209ENST00000431632 EVA1CP58658 441 aa19.78■□□□□ 0.76
CSNK1E-209ENST00000431632 STRN4Q9NRL3 753 aa19.78■□□□□ 0.76
CSNK1E-209ENST00000431632 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 NWD2Q9ULI1 1742 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 COG3Q96JB2 828 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 PANK3Q9H999 370 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 AXIN2Q9Y2T1 843 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 MYOM1P52179 1685 aa19.77■□□□□ 0.76
CSNK1E-209ENST00000431632 CAMTA1Q9Y6Y1 1673 aa19.76■□□□□ 0.75
CSNK1E-209ENST00000431632 AATKQ6ZMQ8 1374 aa19.76■□□□□ 0.75
CSNK1E-209ENST00000431632 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.76■□□□□ 0.75
CSNK1E-209ENST00000431632 CDK12Q9NYV4 1490 aaPredicted RBP19.75■□□□□ 0.75
CSNK1E-209ENST00000431632 OVOS2A0A0J9YW53 1432 aa19.75■□□□□ 0.75
CSNK1E-209ENST00000431632 OVOS2Q6IE36 1432 aa19.75■□□□□ 0.75
CSNK1E-209ENST00000431632 NSD3Q9BZ95 1437 aa19.75■□□□□ 0.75
CSNK1E-209ENST00000431632 FBLN1P23142 703 aa19.74■□□□□ 0.75
CSNK1E-209ENST00000431632 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
CSNK1E-209ENST00000431632 SPATA31A5Q5VU36 1347 aa19.74■□□□□ 0.75
CSNK1E-209ENST00000431632 SPATA31A7Q8IWB4 1347 aa19.74■□□□□ 0.75
CSNK1E-209ENST00000431632 NFAT5O94916 1531 aa19.73■□□□□ 0.75
CSNK1E-209ENST00000431632 ONECUT3O60422 494 aaPredicted RBP19.73■□□□□ 0.75
CSNK1E-209ENST00000431632 RGS12O14924 1447 aa19.72■□□□□ 0.75
CSNK1E-209ENST00000431632 NRAPQ86VF7 1730 aa19.72■□□□□ 0.75
CSNK1E-209ENST00000431632 USP54Q70EL1 1684 aa19.71■□□□□ 0.75
CSNK1E-209ENST00000431632 GLI3P10071 1580 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms