RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 LRP6O75581 1613 aa15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 MEX3CQ5U5Q3 659 aaKnown RBP15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 CABLES1Q8TDN4 633 aa15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
SPTLC3-202ENST00000431275 COL22A1Q8NFW1 1626 aaPredicted RBP15.46■□□□□ 0.06
SPTLC3-202ENST00000431275 CD163L1Q9NR16 1453 aa15.46■□□□□ 0.06
SPTLC3-202ENST00000431275 SSH2Q76I76 1423 aa15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 NUTM2GQ5VZR2 741 aa15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
SPTLC3-202ENST00000431275 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
SPTLC3-202ENST00000431275 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
SPTLC3-202ENST00000431275 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
SPTLC3-202ENST00000431275 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
SPTLC3-202ENST00000431275 A0A1W2PP64 1363 aa15.43■□□□□ 0.06
SPTLC3-202ENST00000431275 NLRP13Q86W25 1043 aa15.42■□□□□ 0.06
SPTLC3-202ENST00000431275 TTC21AQ8NDW8 1320 aa15.42■□□□□ 0.06
SPTLC3-202ENST00000431275 AKAP12Q02952 1782 aa15.41■□□□□ 0.06
SPTLC3-202ENST00000431275 NLRP6P59044 892 aa15.41■□□□□ 0.06
SPTLC3-202ENST00000431275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
SPTLC3-202ENST00000431275 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
SPTLC3-202ENST00000431275 ANKRD36BQ8N2N9 1353 aa15.4■□□□□ 0.06
SPTLC3-202ENST00000431275 NGLY1Q96IV0 654 aa15.4■□□□□ 0.06
SPTLC3-202ENST00000431275 RGS17Q9UGC6 210 aaPredicted RBP15.39■□□□□ 0.05
SPTLC3-202ENST00000431275 EDC4Q6P2E9 1401 aaKnown RBP15.39■□□□□ 0.05
SPTLC3-202ENST00000431275 MON2Q7Z3U7 1717 aa15.38■□□□□ 0.05
SPTLC3-202ENST00000431275 NME9Q86XW9 330 aa15.38■□□□□ 0.05
SPTLC3-202ENST00000431275 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
SPTLC3-202ENST00000431275 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
SPTLC3-202ENST00000431275 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
SPTLC3-202ENST00000431275 USP19O94966 1318 aa15.37■□□□□ 0.05
SPTLC3-202ENST00000431275 AFF2P51816 1311 aa15.37■□□□□ 0.05
SPTLC3-202ENST00000431275 NRKQ7Z2Y5 1582 aa15.36■□□□□ 0.05
SPTLC3-202ENST00000431275 GCP02774 474 aa15.36■□□□□ 0.05
SPTLC3-202ENST00000431275 FNBP4Q8N3X1 1017 aaPredicted RBP15.36■□□□□ 0.05
SPTLC3-202ENST00000431275 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
SPTLC3-202ENST00000431275 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
SPTLC3-202ENST00000431275 USP31Q70CQ4 1352 aa15.35■□□□□ 0.05
SPTLC3-202ENST00000431275 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
SPTLC3-202ENST00000431275 MYOM1P52179 1685 aa15.35■□□□□ 0.05
SPTLC3-202ENST00000431275 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
SPTLC3-202ENST00000431275 PANK3Q9H999 370 aa15.34■□□□□ 0.05
SPTLC3-202ENST00000431275 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
SPTLC3-202ENST00000431275 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
SPTLC3-202ENST00000431275 FYB1O15117 783 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 POTEAQ6S8J7 498 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 USP21Q9UK80 565 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 CCDC7Q96M83 1385 aa15.33■□□□□ 0.04
SPTLC3-202ENST00000431275 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
SPTLC3-202ENST00000431275 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
SPTLC3-202ENST00000431275 NSD3Q9BZ95 1437 aa15.32■□□□□ 0.04
SPTLC3-202ENST00000431275 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
SPTLC3-202ENST00000431275 MARF1Q9Y4F3 1742 aaKnown RBP15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 SOX12O15370 315 aa15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 CHRNA2Q15822 529 aa15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 GGNBP2Q9H3C7 697 aa15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 SLIT3O75094 1523 aa15.31■□□□□ 0.04
SPTLC3-202ENST00000431275 CPDO75976 1380 aa15.3■□□□□ 0.04
SPTLC3-202ENST00000431275 SLIT2O94813 1529 aa15.3■□□□□ 0.04
SPTLC3-202ENST00000431275 BCL9LQ86UU0 1499 aa15.3■□□□□ 0.04
SPTLC3-202ENST00000431275 UNC5CLQ8IV45 518 aa15.3■□□□□ 0.04
SPTLC3-202ENST00000431275 COG3Q96JB2 828 aa15.3■□□□□ 0.04
SPTLC3-202ENST00000431275 BTG4Q9NY30 223 aa15.29■□□□□ 0.04
SPTLC3-202ENST00000431275 OVOS2A0A0J9YW53 1432 aa15.28■□□□□ 0.04
SPTLC3-202ENST00000431275 OVOS2Q6IE36 1432 aa15.28■□□□□ 0.04
SPTLC3-202ENST00000431275 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
SPTLC3-202ENST00000431275 ARHGEF25Q86VW2 580 aa15.28■□□□□ 0.04
SPTLC3-202ENST00000431275 TRPC5Q9UL62 973 aaPredicted RBP15.28■□□□□ 0.04
SPTLC3-202ENST00000431275 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.04
SPTLC3-202ENST00000431275 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
SPTLC3-202ENST00000431275 USP54Q70EL1 1684 aa15.26■□□□□ 0.03
SPTLC3-202ENST00000431275 RXRBP28702 533 aa15.26■□□□□ 0.03
SPTLC3-202ENST00000431275 KNSTRNQ9Y448 316 aa15.26■□□□□ 0.03
SPTLC3-202ENST00000431275 ILDR2Q71H61 639 aa15.25■□□□□ 0.03
SPTLC3-202ENST00000431275 NFAT5O94916 1531 aa15.25■□□□□ 0.03
SPTLC3-202ENST00000431275 ATRNO75882 1429 aa15.25■□□□□ 0.03
SPTLC3-202ENST00000431275 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 FBLN1P23142 703 aa15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 EVA1CP58658 441 aa15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 VPS72Q15906 364 aa15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 PLCH1Q4KWH8 1693 aa15.24■□□□□ 0.03
SPTLC3-202ENST00000431275 GJD4Q96KN9 370 aaPredicted RBP15.23■□□□□ 0.03
SPTLC3-202ENST00000431275 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
SPTLC3-202ENST00000431275 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
SPTLC3-202ENST00000431275 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
SPTLC3-202ENST00000431275 CAMTA1Q9Y6Y1 1673 aa15.22■□□□□ 0.03
SPTLC3-202ENST00000431275 CCDC9Q9Y3X0 531 aaKnown RBP15.22■□□□□ 0.03
SPTLC3-202ENST00000431275 AMER1Q5JTC6 1135 aaPredicted RBP15.21■□□□□ 0.03
SPTLC3-202ENST00000431275 KIF20BQ96Q89 1820 aa15.21■□□□□ 0.03
SPTLC3-202ENST00000431275 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
SPTLC3-202ENST00000431275 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms