RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 UPF1Q92900 1129 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■□□□□ 9.4
CTDSP1-203ENST00000431127 BRD4O60885 1362 aaPredicted RBP24.42■■□□□ 1.5
CTDSP1-203ENST00000431127 TRPM3Q9HCF6 1732 aaPredicted RBP24.42■■□□□ 1.5
CTDSP1-203ENST00000431127 HAP1P54257 671 aaPredicted RBP24.42■■□□□ 1.5
CTDSP1-203ENST00000431127 NGLY1Q96IV0 654 aa24.42■■□□□ 1.5
CTDSP1-203ENST00000431127 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
CTDSP1-203ENST00000431127 RBM6P78332 1123 aaKnown RBP24.39■■□□□ 1.49
CTDSP1-203ENST00000431127 CDK12Q9NYV4 1490 aaPredicted RBP24.38■■□□□ 1.49
CTDSP1-203ENST00000431127 ALS2Q96Q42 1657 aa24.37■■□□□ 1.49
CTDSP1-203ENST00000431127 TMF1P82094 1093 aa24.37■■□□□ 1.49
CTDSP1-203ENST00000431127 CABLES1Q8TDN4 633 aa24.37■■□□□ 1.49
CTDSP1-203ENST00000431127 USP6P35125 1406 aa24.35■■□□□ 1.49
CTDSP1-203ENST00000431127 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
CTDSP1-203ENST00000431127 FNBP4Q8N3X1 1017 aaPredicted RBP24.35■■□□□ 1.49
CTDSP1-203ENST00000431127 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
CTDSP1-203ENST00000431127 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
CTDSP1-203ENST00000431127 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
CTDSP1-203ENST00000431127 NINLQ9Y2I6 1382 aa24.32■■□□□ 1.48
CTDSP1-203ENST00000431127 EIF4G2P78344 907 aaKnown RBP eCLIP24.32■■□□□ 1.48
CTDSP1-203ENST00000431127 USP21Q9UK80 565 aa24.32■■□□□ 1.48
CTDSP1-203ENST00000431127 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
CTDSP1-203ENST00000431127 HDGFL2Q7Z4V5 671 aaPredicted RBP24.3■■□□□ 1.48
CTDSP1-203ENST00000431127 NLRP13Q86W25 1043 aa24.3■■□□□ 1.48
CTDSP1-203ENST00000431127 SLC12A5Q9H2X9 1139 aa24.3■■□□□ 1.48
CTDSP1-203ENST00000431127 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
CTDSP1-203ENST00000431127 KTN1Q86UP2 1357 aaKnown RBP24.29■■□□□ 1.48
CTDSP1-203ENST00000431127 SSH2Q76I76 1423 aa24.29■■□□□ 1.48
CTDSP1-203ENST00000431127 TRPC5Q9UL62 973 aaPredicted RBP24.29■■□□□ 1.48
CTDSP1-203ENST00000431127 MARF1Q9Y4F3 1742 aaKnown RBP24.29■■□□□ 1.48
CTDSP1-203ENST00000431127 NUTM2GQ5VZR2 741 aa24.28■■□□□ 1.48
CTDSP1-203ENST00000431127 TTC21AQ8NDW8 1320 aa24.27■■□□□ 1.48
CTDSP1-203ENST00000431127 ABCA3Q99758 1704 aa24.27■■□□□ 1.48
CTDSP1-203ENST00000431127 TTC21BQ7Z4L5 1316 aa24.26■■□□□ 1.47
CTDSP1-203ENST00000431127 NLRP6P59044 892 aa24.25■■□□□ 1.47
CTDSP1-203ENST00000431127 AKAP12Q02952 1782 aa24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 FAM83GA6ND36 823 aa24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 HSPA5P11021 654 aaKnown RBP24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 USP19O94966 1318 aa24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 RGS12O14924 1447 aa24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 SLIT2O94813 1529 aa24.24■■□□□ 1.47
CTDSP1-203ENST00000431127 UNC5CLQ8IV45 518 aa24.23■■□□□ 1.47
CTDSP1-203ENST00000431127 BCL9LQ86UU0 1499 aa24.23■■□□□ 1.47
CTDSP1-203ENST00000431127 CD163L1Q9NR16 1453 aa24.23■■□□□ 1.47
CTDSP1-203ENST00000431127 PRDM11Q9NQV5 511 aa24.22■■□□□ 1.47
CTDSP1-203ENST00000431127 CRYBG1Q9Y4K1 1723 aa24.21■■□□□ 1.47
CTDSP1-203ENST00000431127 EDC4Q6P2E9 1401 aaKnown RBP24.2■■□□□ 1.46
CTDSP1-203ENST00000431127 A0A1W2PP64 1363 aa24.2■■□□□ 1.46
CTDSP1-203ENST00000431127 GCP02774 474 aa24.2■■□□□ 1.46
CTDSP1-203ENST00000431127 ATRNO75882 1429 aa24.19■■□□□ 1.46
CTDSP1-203ENST00000431127 MON2Q7Z3U7 1717 aa24.19■■□□□ 1.46
CTDSP1-203ENST00000431127 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
CTDSP1-203ENST00000431127 PHRF1Q9P1Y6 1649 aaKnown RBP24.18■■□□□ 1.46
CTDSP1-203ENST00000431127 ZC3H6P61129 1189 aaKnown RBP24.18■■□□□ 1.46
CTDSP1-203ENST00000431127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
CTDSP1-203ENST00000431127 ANKRD36BQ8N2N9 1353 aa24.17■■□□□ 1.46
CTDSP1-203ENST00000431127 NRKQ7Z2Y5 1582 aa24.17■■□□□ 1.46
CTDSP1-203ENST00000431127 CPDO75976 1380 aa24.16■■□□□ 1.46
CTDSP1-203ENST00000431127 PIK3C2AO00443 1686 aa24.16■■□□□ 1.46
CTDSP1-203ENST00000431127 KCNH5Q8NCM2 988 aa24.16■■□□□ 1.46
CTDSP1-203ENST00000431127 BTG4Q9NY30 223 aa24.16■■□□□ 1.46
CTDSP1-203ENST00000431127 COL14A1Q05707 1796 aaKnown RBP24.16■■□□□ 1.46
CTDSP1-203ENST00000431127 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
CTDSP1-203ENST00000431127 GJD4Q96KN9 370 aaPredicted RBP24.15■■□□□ 1.46
CTDSP1-203ENST00000431127 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
CTDSP1-203ENST00000431127 VPS72Q15906 364 aa24.14■■□□□ 1.45
CTDSP1-203ENST00000431127 USP31Q70CQ4 1352 aa24.14■■□□□ 1.45
CTDSP1-203ENST00000431127 PLCH1Q4KWH8 1693 aa24.13■■□□□ 1.45
CTDSP1-203ENST00000431127 SLIT3O75094 1523 aa24.13■■□□□ 1.45
CTDSP1-203ENST00000431127 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
CTDSP1-203ENST00000431127 NME9Q86XW9 330 aa24.12■■□□□ 1.45
CTDSP1-203ENST00000431127 CCDC9Q9Y3X0 531 aaKnown RBP24.1■■□□□ 1.45
CTDSP1-203ENST00000431127 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
CTDSP1-203ENST00000431127 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
CTDSP1-203ENST00000431127 AATKQ6ZMQ8 1374 aa24.06■■□□□ 1.44
CTDSP1-203ENST00000431127 EVA1CP58658 441 aa24.06■■□□□ 1.44
CTDSP1-203ENST00000431127 SOX12O15370 315 aa24.05■■□□□ 1.44
CTDSP1-203ENST00000431127 ARHGEF25Q86VW2 580 aa24.05■■□□□ 1.44
CTDSP1-203ENST00000431127 ZBTB7CA1YPR0 619 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 CCDC125Q86Z20 511 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 COG3Q96JB2 828 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 STRN4Q9NRL3 753 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 NRAPQ86VF7 1730 aa24.04■■□□□ 1.44
CTDSP1-203ENST00000431127 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
CTDSP1-203ENST00000431127 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
CTDSP1-203ENST00000431127 MYOM1P52179 1685 aa24.02■■□□□ 1.44
CTDSP1-203ENST00000431127 SPATA31A5Q5VU36 1347 aa24.02■■□□□ 1.44
CTDSP1-203ENST00000431127 SPATA31A7Q8IWB4 1347 aa24.02■■□□□ 1.44
CTDSP1-203ENST00000431127 CAMTA1Q9Y6Y1 1673 aa24.02■■□□□ 1.44
CTDSP1-203ENST00000431127 NFAT5O94916 1531 aa24.01■■□□□ 1.43
CTDSP1-203ENST00000431127 GLI3P10071 1580 aa24.01■■□□□ 1.43
CTDSP1-203ENST00000431127 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
CTDSP1-203ENST00000431127 FYB1O15117 783 aa24.01■■□□□ 1.43
CTDSP1-203ENST00000431127 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
CTDSP1-203ENST00000431127 LMO7Q8WWI1 1683 aa24■■□□□ 1.43
CTDSP1-203ENST00000431127 ONECUT3O60422 494 aaPredicted RBP24■■□□□ 1.43
CTDSP1-203ENST00000431127 NSD3Q9BZ95 1437 aa23.99■■□□□ 1.43
CTDSP1-203ENST00000431127 SPATA31A1Q5TZJ5 1347 aa23.98■■□□□ 1.43
CTDSP1-203ENST00000431127 COL5A2P05997 1499 aaPredicted RBP23.97■■□□□ 1.43
CTDSP1-203ENST00000431127 GGNBP2Q9H3C7 697 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms