RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 FAM83GA6ND36 823 aa27.29■■□□□ 1.96
AC004540.1-202ENST00000430548 SEPT12Q8IYM1 358 aa27.29■■□□□ 1.96
AC004540.1-202ENST00000430548 RGPD1P0DJD0 1748 aa27.27■■□□□ 1.96
AC004540.1-202ENST00000430548 ZRANB1Q9UGI0 708 aa27.26■■□□□ 1.95
AC004540.1-202ENST00000430548 PLEKHG5O94827 1062 aa27.25■■□□□ 1.95
AC004540.1-202ENST00000430548 NRKQ7Z2Y5 1582 aa27.24■■□□□ 1.95
AC004540.1-202ENST00000430548 TNS1Q9HBL0 1735 aaKnown RBP27.23■■□□□ 1.95
AC004540.1-202ENST00000430548 POLR3AO14802 1390 aaPredicted RBP27.22■■□□□ 1.95
AC004540.1-202ENST00000430548 QRICH2Q9H0J4 1663 aa27.21■■□□□ 1.95
AC004540.1-202ENST00000430548 BTG4Q9NY30 223 aa27.21■■□□□ 1.95
AC004540.1-202ENST00000430548 KRT27Q7Z3Y8 459 aa27.2■■□□□ 1.94
AC004540.1-202ENST00000430548 NGDNQ8NEJ9 315 aaKnown RBP27.2■■□□□ 1.94
AC004540.1-202ENST00000430548 CCDC9Q9Y3X0 531 aaKnown RBP27.2■■□□□ 1.94
AC004540.1-202ENST00000430548 LRP5O75197 1615 aa27.19■■□□□ 1.94
AC004540.1-202ENST00000430548 NUDT16Q96DE0 195 aaKnown RBP27.19■■□□□ 1.94
AC004540.1-202ENST00000430548 LMO7Q8WWI1 1683 aa27.18■■□□□ 1.94
AC004540.1-202ENST00000430548 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
AC004540.1-202ENST00000430548 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
AC004540.1-202ENST00000430548 DEFB132Q7Z7B7 95 aa27.16■■□□□ 1.94
AC004540.1-202ENST00000430548 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
AC004540.1-202ENST00000430548 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
AC004540.1-202ENST00000430548 PAK3O75914 559 aaPredicted RBP27.13■■□□□ 1.93
AC004540.1-202ENST00000430548 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
AC004540.1-202ENST00000430548 SF3B2Q13435 895 aaKnown RBP27.12■■□□□ 1.93
AC004540.1-202ENST00000430548 PRDM11Q9NQV5 511 aa27.12■■□□□ 1.93
AC004540.1-202ENST00000430548 TRPM1Q7Z4N2 1603 aa27.12■■□□□ 1.93
AC004540.1-202ENST00000430548 DISP2A7MBM2 1401 aa27.1■■□□□ 1.93
AC004540.1-202ENST00000430548 ACEP12821 1306 aa27.1■■□□□ 1.93
AC004540.1-202ENST00000430548 PLEKHG3A1L390 1219 aa27.09■■□□□ 1.93
AC004540.1-202ENST00000430548 CCDC61Q9Y6R9 512 aa27.09■■□□□ 1.93
AC004540.1-202ENST00000430548 A0A0G2JS52 829 aa27.07■■□□□ 1.92
AC004540.1-202ENST00000430548 MYT1Q01538 1121 aa27.07■■□□□ 1.92
AC004540.1-202ENST00000430548 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
AC004540.1-202ENST00000430548 SPATA31A1Q5TZJ5 1347 aa27.07■■□□□ 1.92
AC004540.1-202ENST00000430548 CAMTA1Q9Y6Y1 1673 aa27.06■■□□□ 1.92
AC004540.1-202ENST00000430548 USP19O94966 1318 aa27.06■■□□□ 1.92
AC004540.1-202ENST00000430548 CPDO75976 1380 aa27.06■■□□□ 1.92
AC004540.1-202ENST00000430548 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
AC004540.1-202ENST00000430548 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
AC004540.1-202ENST00000430548 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
AC004540.1-202ENST00000430548 PARP4Q9UKK3 1724 aaKnown RBP27.04■■□□□ 1.92
AC004540.1-202ENST00000430548 BAG6P46379 1132 aa27.03■■□□□ 1.92
AC004540.1-202ENST00000430548 RREB1Q92766 1687 aa27.03■■□□□ 1.92
AC004540.1-202ENST00000430548 CENPJQ9HC77 1338 aaPredicted RBP27.03■■□□□ 1.92
AC004540.1-202ENST00000430548 PIK3C2AO00443 1686 aa27.02■■□□□ 1.92
AC004540.1-202ENST00000430548 BRD4O60885 1362 aaPredicted RBP27.02■■□□□ 1.92
AC004540.1-202ENST00000430548 WNK3Q9BYP7 1800 aa27.02■■□□□ 1.92
AC004540.1-202ENST00000430548 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
AC004540.1-202ENST00000430548 SLIT3O75094 1523 aa27.01■■□□□ 1.91
AC004540.1-202ENST00000430548 CHRNA2Q15822 529 aa27.01■■□□□ 1.91
AC004540.1-202ENST00000430548 NUTM2GQ5VZR2 741 aa26.99■■□□□ 1.91
AC004540.1-202ENST00000430548 ZC3H6P61129 1189 aaKnown RBP26.98■■□□□ 1.91
AC004540.1-202ENST00000430548 USP6P35125 1406 aa26.98■■□□□ 1.91
AC004540.1-202ENST00000430548 COL5A2P05997 1499 aaPredicted RBP26.97■■□□□ 1.91
AC004540.1-202ENST00000430548 COL18A1P39060 1754 aa26.97■■□□□ 1.91
AC004540.1-202ENST00000430548 NUP188Q5SRE5 1749 aa26.96■■□□□ 1.91
AC004540.1-202ENST00000430548 FAM182BQ5T319 152 aa26.96■■□□□ 1.91
AC004540.1-202ENST00000430548 ABTB2Q8N961 1025 aa26.95■■□□□ 1.9
AC004540.1-202ENST00000430548 SRPK2P78362 688 aaKnown RBP26.94■■□□□ 1.9
AC004540.1-202ENST00000430548 BARGINQ6ZT62 677 aa26.94■■□□□ 1.9
AC004540.1-202ENST00000430548 STRN4Q9NRL3 753 aa26.94■■□□□ 1.9
AC004540.1-202ENST00000430548 PEAK1Q9H792 1746 aa26.93■■□□□ 1.9
AC004540.1-202ENST00000430548 LRRC37A3O60309 1634 aa26.93■■□□□ 1.9
AC004540.1-202ENST00000430548 CABP2Q9NPB3 220 aa26.92■■□□□ 1.9
AC004540.1-202ENST00000430548 RGPD3A6NKT7 1758 aaPredicted RBP26.92■■□□□ 1.9
AC004540.1-202ENST00000430548 RGPD4Q7Z3J3 1758 aa26.92■■□□□ 1.9
AC004540.1-202ENST00000430548 EN1Q05925 392 aaPredicted RBP26.91■■□□□ 1.9
AC004540.1-202ENST00000430548 MON2Q7Z3U7 1717 aa26.9■■□□□ 1.9
AC004540.1-202ENST00000430548 SBF2Q86WG5 1849 aa26.9■■□□□ 1.9
AC004540.1-202ENST00000430548 NLRP13Q86W25 1043 aa26.9■■□□□ 1.9
AC004540.1-202ENST00000430548 L3MBTL2Q969R5 705 aa26.9■■□□□ 1.9
AC004540.1-202ENST00000430548 PARD3Q8TEW0 1356 aa26.89■■□□□ 1.9
AC004540.1-202ENST00000430548 USP54Q70EL1 1684 aa26.89■■□□□ 1.89
AC004540.1-202ENST00000430548 GCP02774 474 aa26.88■■□□□ 1.89
AC004540.1-202ENST00000430548 LARP1Q6PKG0 1096 aaKnown RBP26.88■■□□□ 1.89
AC004540.1-202ENST00000430548 FAM196AQ6ZSG2 479 aa26.88■■□□□ 1.89
AC004540.1-202ENST00000430548 RGPD5Q99666 1765 aa26.88■■□□□ 1.89
AC004540.1-202ENST00000430548 PSDA5PKW4 1024 aaPredicted RBP26.87■■□□□ 1.89
AC004540.1-202ENST00000430548 CRB1P82279 1406 aa26.86■■□□□ 1.89
AC004540.1-202ENST00000430548 TCP11L2Q8N4U5 519 aa26.85■■□□□ 1.89
AC004540.1-202ENST00000430548 USP35Q9P2H5 1018 aa26.85■■□□□ 1.89
AC004540.1-202ENST00000430548 THRAP3Q9Y2W1 955 aaKnown RBP26.85■■□□□ 1.89
AC004540.1-202ENST00000430548 AATKQ6ZMQ8 1374 aa26.84■■□□□ 1.89
AC004540.1-202ENST00000430548 EVA1CP58658 441 aa26.84■■□□□ 1.89
AC004540.1-202ENST00000430548 CABP1Q9NZU7 370 aa26.84■■□□□ 1.89
AC004540.1-202ENST00000430548 CAMKK2Q96RR4 588 aa26.83■■□□□ 1.89
AC004540.1-202ENST00000430548 EVC2Q86UK5 1308 aa26.83■■□□□ 1.89
AC004540.1-202ENST00000430548 TRIM37O94972 964 aa26.82■■□□□ 1.88
AC004540.1-202ENST00000430548 EZH2Q15910 746 aaKnown RBP26.82■■□□□ 1.88
AC004540.1-202ENST00000430548 ROCK2O75116 1388 aaKnown RBP26.82■■□□□ 1.88
AC004540.1-202ENST00000430548 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
AC004540.1-202ENST00000430548 NFAT5O94916 1531 aa26.81■■□□□ 1.88
AC004540.1-202ENST00000430548 ABCC6O95255 1503 aa26.81■■□□□ 1.88
AC004540.1-202ENST00000430548 SIN3AQ96ST3 1273 aa26.79■■□□□ 1.88
AC004540.1-202ENST00000430548 SBNO2Q9Y2G9 1366 aa26.79■■□□□ 1.88
AC004540.1-202ENST00000430548 PDE3BQ13370 1112 aa26.78■■□□□ 1.88
AC004540.1-202ENST00000430548 OVOS2A0A0G2JMS6 1433 aa26.77■■□□□ 1.88
AC004540.1-202ENST00000430548 OVOS2A0A0J9YW53 1432 aa26.77■■□□□ 1.88
AC004540.1-202ENST00000430548 OVOS2Q6IE36 1432 aa26.77■■□□□ 1.88
AC004540.1-202ENST00000430548 NLRP6P59044 892 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms