RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
MSH5-208ENST00000429846 CCDC9Q9Y3X0 531 aaKnown RBP21.64■■□□□ 1.05
MSH5-208ENST00000429846 NUDT16Q96DE0 195 aaKnown RBP21.63■■□□□ 1.05
MSH5-208ENST00000429846 ZRANB1Q9UGI0 708 aa21.62■■□□□ 1.05
MSH5-208ENST00000429846 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
MSH5-208ENST00000429846 PAK3O75914 559 aaPredicted RBP21.61■■□□□ 1.05
MSH5-208ENST00000429846 BTG4Q9NY30 223 aa21.61■■□□□ 1.05
MSH5-208ENST00000429846 POLR3AO14802 1390 aaPredicted RBP21.61■■□□□ 1.05
MSH5-208ENST00000429846 KRT27Q7Z3Y8 459 aa21.59■■□□□ 1.05
MSH5-208ENST00000429846 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
MSH5-208ENST00000429846 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
MSH5-208ENST00000429846 PRDM11Q9NQV5 511 aa21.57■■□□□ 1.04
MSH5-208ENST00000429846 CCDC61Q9Y6R9 512 aa21.57■■□□□ 1.04
MSH5-208ENST00000429846 A0A0G2JS52 829 aa21.55■■□□□ 1.04
MSH5-208ENST00000429846 MYT1Q01538 1121 aa21.55■■□□□ 1.04
MSH5-208ENST00000429846 THSD7AQ9UPZ6 1657 aa21.55■■□□□ 1.04
MSH5-208ENST00000429846 QRICH2Q9H0J4 1663 aa21.54■■□□□ 1.04
MSH5-208ENST00000429846 PLEKHG3A1L390 1219 aa21.54■■□□□ 1.04
MSH5-208ENST00000429846 ACEP12821 1306 aa21.54■■□□□ 1.04
MSH5-208ENST00000429846 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
MSH5-208ENST00000429846 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
MSH5-208ENST00000429846 FAM98CQ17RN3 349 aaKnown RBP21.53■■□□□ 1.04
MSH5-208ENST00000429846 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
MSH5-208ENST00000429846 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
MSH5-208ENST00000429846 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
MSH5-208ENST00000429846 KIAA0232Q92628 1395 aa21.52■■□□□ 1.04
MSH5-208ENST00000429846 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.03
MSH5-208ENST00000429846 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
MSH5-208ENST00000429846 BRD4O60885 1362 aaPredicted RBP21.49■■□□□ 1.03
MSH5-208ENST00000429846 PPIP5K1Q6PFW1 1433 aa21.49■■□□□ 1.03
MSH5-208ENST00000429846 DEFB132Q7Z7B7 95 aa21.49■■□□□ 1.03
MSH5-208ENST00000429846 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
MSH5-208ENST00000429846 SRPK2P78362 688 aaKnown RBP21.48■■□□□ 1.03
MSH5-208ENST00000429846 SPATA31A1Q5TZJ5 1347 aa21.47■■□□□ 1.03
MSH5-208ENST00000429846 CPDO75976 1380 aa21.47■■□□□ 1.03
MSH5-208ENST00000429846 LMO7Q8WWI1 1683 aa21.47■■□□□ 1.03
MSH5-208ENST00000429846 BAG6P46379 1132 aa21.46■■□□□ 1.03
MSH5-208ENST00000429846 ABTB2Q8N961 1025 aa21.46■■□□□ 1.03
MSH5-208ENST00000429846 USP19O94966 1318 aa21.46■■□□□ 1.03
MSH5-208ENST00000429846 CHRNA2Q15822 529 aa21.45■■□□□ 1.02
MSH5-208ENST00000429846 NUTM2GQ5VZR2 741 aa21.45■■□□□ 1.02
MSH5-208ENST00000429846 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
MSH5-208ENST00000429846 L3MBTL2Q969R5 705 aa21.44■■□□□ 1.02
MSH5-208ENST00000429846 SSH2Q76I76 1423 aa21.44■■□□□ 1.02
MSH5-208ENST00000429846 TNS1Q9HBL0 1735 aaKnown RBP21.43■■□□□ 1.02
MSH5-208ENST00000429846 DISP2A7MBM2 1401 aa21.43■■□□□ 1.02
MSH5-208ENST00000429846 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
MSH5-208ENST00000429846 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
MSH5-208ENST00000429846 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
MSH5-208ENST00000429846 STRN4Q9NRL3 753 aa21.42■■□□□ 1.02
MSH5-208ENST00000429846 CAMTA1Q9Y6Y1 1673 aa21.41■■□□□ 1.02
MSH5-208ENST00000429846 USP6P35125 1406 aa21.41■■□□□ 1.02
MSH5-208ENST00000429846 LRP5O75197 1615 aa21.4■■□□□ 1.02
MSH5-208ENST00000429846 EVC2Q86UK5 1308 aa21.39■■□□□ 1.01
MSH5-208ENST00000429846 BARGINQ6ZT62 677 aa21.39■■□□□ 1.01
MSH5-208ENST00000429846 ROCK2O75116 1388 aaKnown RBP21.38■■□□□ 1.01
MSH5-208ENST00000429846 GCP02774 474 aa21.38■■□□□ 1.01
MSH5-208ENST00000429846 EVA1CP58658 441 aa21.38■■□□□ 1.01
MSH5-208ENST00000429846 SLIT3O75094 1523 aa21.38■■□□□ 1.01
MSH5-208ENST00000429846 FAM182BQ5T319 152 aa21.36■■□□□ 1.01
MSH5-208ENST00000429846 FAM196AQ6ZSG2 479 aa21.36■■□□□ 1.01
MSH5-208ENST00000429846 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
MSH5-208ENST00000429846 COL5A2P05997 1499 aaPredicted RBP21.36■■□□□ 1.01
MSH5-208ENST00000429846 PIK3C2AO00443 1686 aa21.36■■□□□ 1.01
MSH5-208ENST00000429846 AKAP12Q02952 1782 aa21.36■■□□□ 1.01
MSH5-208ENST00000429846 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
MSH5-208ENST00000429846 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
MSH5-208ENST00000429846 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
MSH5-208ENST00000429846 THRAP3Q9Y2W1 955 aaKnown RBP21.35■■□□□ 1.01
MSH5-208ENST00000429846 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
MSH5-208ENST00000429846 LARP1Q6PKG0 1096 aaKnown RBP21.33■■□□□ 1.01
MSH5-208ENST00000429846 CRB1P82279 1406 aa21.32■■□□□ 1
MSH5-208ENST00000429846 NLRP6P59044 892 aa21.32■■□□□ 1
MSH5-208ENST00000429846 EN1Q05925 392 aaPredicted RBP21.32■■□□□ 1
MSH5-208ENST00000429846 PARD3Q8TEW0 1356 aa21.32■■□□□ 1
MSH5-208ENST00000429846 PDE3BQ13370 1112 aa21.31■■□□□ 1
MSH5-208ENST00000429846 NEUROD1Q13562 356 aa21.31■■□□□ 1
MSH5-208ENST00000429846 AATKQ6ZMQ8 1374 aa21.31■■□□□ 1
MSH5-208ENST00000429846 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
MSH5-208ENST00000429846 SBNO2Q9Y2G9 1366 aa21.3■■□□□ 1
MSH5-208ENST00000429846 COL18A1P39060 1754 aa21.29■■□□□ 1
MSH5-208ENST00000429846 RREB1Q92766 1687 aa21.28■■□□□ 1
MSH5-208ENST00000429846 TRIM37O94972 964 aa21.28■■□□□ 1
MSH5-208ENST00000429846 WNK3Q9BYP7 1800 aa21.27■■□□□ 1
MSH5-208ENST00000429846 MON2Q7Z3U7 1717 aa21.27■■□□□ 1
MSH5-208ENST00000429846 C11orf95C9JLR9 678 aaPredicted RBP21.27■■□□□ 1
MSH5-208ENST00000429846 CPSF1Q10570 1443 aaKnown RBP21.27■■□□□ 1
MSH5-208ENST00000429846 TTC21AQ8NDW8 1320 aa21.27■□□□□ 0.99
MSH5-208ENST00000429846 LRRC37A3O60309 1634 aa21.26■□□□□ 0.99
MSH5-208ENST00000429846 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
MSH5-208ENST00000429846 EZH2Q15910 746 aaKnown RBP21.25■□□□□ 0.99
MSH5-208ENST00000429846 KCNH5Q8NCM2 988 aa21.25■□□□□ 0.99
MSH5-208ENST00000429846 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
MSH5-208ENST00000429846 TTC21BQ7Z4L5 1316 aa21.25■□□□□ 0.99
MSH5-208ENST00000429846 ABCC6O95255 1503 aa21.24■□□□□ 0.99
MSH5-208ENST00000429846 APBA3O96018 575 aa21.24■□□□□ 0.99
MSH5-208ENST00000429846 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
MSH5-208ENST00000429846 OVOS2A0A0G2JMS6 1433 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 OVOS2A0A0J9YW53 1432 aa21.23■□□□□ 0.99
MSH5-208ENST00000429846 OVOS2Q6IE36 1432 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms