RNA–Protein interactions for RNA: ENST00000429829.5

XIST-204, X inactive specific transcript, humanhuman

TSL 1 (best) BASIC

Gene XIST, Length 19,275 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-204ENST00000429829 ERC1Q8IUD2 1116 aa5.75□□□□□ -1.49
XIST-204ENST00000429829 NEMFO60524 1076 aa5.75□□□□□ -1.49
XIST-204ENST00000429829 PRPF40AO75400 957 aaKnown RBP5.75□□□□□ -1.49
XIST-204ENST00000429829 U2AF2P26368 475 aaKnown RBP eCLIP5.75□□□□□ -1.492e-22■■■■■ 35.3
XIST-204ENST00000429829 WWC2Q6AWC2 1192 aa5.75□□□□□ -1.49
XIST-204ENST00000429829 ZNHIT6Q9NWK9 470 aaKnown RBP5.74□□□□□ -1.49
XIST-204ENST00000429829 UVSSAQ2YD98 709 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 MCTP2Q6DN12 878 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 MED4Q9NPJ6 270 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 WDR63Q8IWG1 891 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 NUP133Q8WUM0 1156 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 CFAP53Q96M91 514 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 GBP3Q9H0R5 595 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 ZSCAN26Q16670 478 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 DNAJC21Q5F1R6 531 aaKnown RBP5.74□□□□□ -1.49
XIST-204ENST00000429829 SH3GL3Q99963 347 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 TCHPQ9BT92 498 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 BAG4O95429 457 aaKnown RBP5.74□□□□□ -1.49
XIST-204ENST00000429829 HSP90AB2PQ58FF8 381 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 DZIP1Q86YF9 867 aaKnown RBP5.74□□□□□ -1.49
XIST-204ENST00000429829 CGNL1Q0VF96 1302 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 CEP162Q5TB80 1403 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 PTPN14Q15678 1187 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 CENPHQ9H3R5 247 aa5.74□□□□□ -1.49
XIST-204ENST00000429829 MICALL1Q8N3F8 863 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 TRIM5Q9C035 493 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 SMG6Q86US8 1419 aaKnown RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 IRAK4Q9NWZ3 460 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 CLNS1AP54105 237 aaKnown RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 NAA25Q14CX7 972 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 BECN2A8MW95 431 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 CARD10Q9BWT7 1032 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 EBAG9O00559 213 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 SKIDA1Q1XH10 827 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 MCM6Q14566 821 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 GCKP35557 465 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 EGFL6Q8IUX8 553 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 SMTNL1A8MU46 457 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 PDCD2Q16342 344 aaPredicted RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.73□□□□□ -1.491e-8■■■■■ 34.6
XIST-204ENST00000429829 SHTN1A0MZ66 631 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 CTAGE5O15320 804 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 FAM43BQ6ZT52 329 aaPredicted RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 NAT10Q9H0A0 1025 aaKnown RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 DHX16O60231 1041 aaKnown RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 TUBB4BP68371 445 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 ARFGAP3Q9NP61 516 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 FOXD4L1Q9NU39 408 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 MAGEA9P43362 315 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 TRAF1Q13077 416 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 HSP90AB4PQ58FF6 505 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 CAPN2P17655 700 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 EIF5P55010 431 aaKnown RBP5.73□□□□□ -1.49
XIST-204ENST00000429829 MAFGO15525 162 aa5.73□□□□□ -1.49
XIST-204ENST00000429829 WDR78Q5VTH9 848 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 A6NNZ2 444 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 ZBTB22O15209 634 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 TUBB8Q3ZCM7 444 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 GOLGA5Q8TBA6 731 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 MMS22LQ6ZRQ5 1243 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 POLD1P28340 1107 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 BRPF1P55201 1214 aaPredicted RBP5.72□□□□□ -1.49
XIST-204ENST00000429829 WDR66Q8TBY9 1149 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 ARMC2Q8NEN0 867 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 FAM114A1Q8IWE2 563 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 TBC1D2Q9BYX2 928 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 KCNA4P22459 653 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 HNRNPH2P55795 449 aaKnown RBP5.72□□□□□ -1.49
XIST-204ENST00000429829 NEDD9Q14511 834 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 NBPF8Q3BBV2 869 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.72□□□□□ -1.49
XIST-204ENST00000429829 DCAF8L1A6NGE4 600 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 SH2D4BQ5SQS7 431 aa5.72□□□□□ -1.49
XIST-204ENST00000429829 CCDC175P0C221 793 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 CT47B1P0C2W7 299 aaPredicted RBP5.71□□□□□ -1.49
XIST-204ENST00000429829 PIBF1Q8WXW3 757 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 CHMP4CQ96CF2 233 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 CCDC192P0DO97 292 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 REC8O95072 547 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 CEP57Q86XR8 500 aa5.71□□□□□ -1.49
XIST-204ENST00000429829 CHCHD3Q9NX63 227 aaKnown RBP5.71□□□□□ -1.49
XIST-204ENST00000429829 SENP3-EIF4A1A0A087X0R7 540 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 PHLDB1Q86UU1 1377 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 CEP104O60308 925 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 BCL2L12Q9HB09 334 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.71□□□□□ -1.5
XIST-204ENST00000429829 POTEB2H3BUK9 544 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 RWDD2BP57060 319 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 CRACR2AQ9BSW2 395 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 OTUD6BQ8N6M0 293 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 IQCGQ9H095 443 aaKnown RBP5.71□□□□□ -1.5
XIST-204ENST00000429829 TAX1BP1Q86VP1 789 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 SPC24Q8NBT2 197 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 ZBTB9Q96C00 473 aa5.71□□□□□ -1.5
XIST-204ENST00000429829 TRIM6Q9C030 488 aaPredicted RBP5.71□□□□□ -1.5
XIST-204ENST00000429829 IPO8O15397 1037 aaKnown RBP5.71□□□□□ -1.5
XIST-204ENST00000429829 ZMAT2Q96NC0 199 aaKnown RBP5.71□□□□□ -1.5
XIST-204ENST00000429829 SH3BGRP55822 239 aaPredicted RBP5.7□□□□□ -1.5
XIST-204ENST00000429829 POTEDQ86YR6 584 aa5.7□□□□□ -1.5
XIST-204ENST00000429829 PLIN1O60240 522 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms