RNA–Protein interactions for RNA: ENST00000429798.1

LIMD1-AS1-202, LIMD1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene LIMD1-AS1, Length 955 nt, Biotype antisense RNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-AS1-202ENST00000429798 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 A0A1W2PP64 1363 aa14.05□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 KTN1Q86UP2 1357 aaKnown RBP14.05□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 PMFBP1Q8TBY8 1022 aa14.04□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 ACEP12821 1306 aa14.04□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 CERKQ8TCT0 537 aa14.03□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 NSD3Q9BZ95 1437 aa14.02□□□□□ -0.16
LIMD1-AS1-202ENST00000429798 CGNL1Q0VF96 1302 aa14.02□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 NPHP3Q7Z494 1330 aa14.02□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 CPSF1Q10570 1443 aaKnown RBP14.01□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 BRD4O60885 1362 aaPredicted RBP14.01□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 PSME1Q06323 249 aa14.01□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 CD163L1Q9NR16 1453 aa14□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 USP6P35125 1406 aa14□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 UBAP1LF5GYI3 381 aa14□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 ANP32CO43423 234 aa13.99□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 BRINP3Q76B58 766 aa13.99□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 NSD2O96028 1365 aa13.98□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 FOXO3O43524 673 aa13.98□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 ROBO1Q9Y6N7 1651 aa13.96□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
LIMD1-AS1-202ENST00000429798 NRKQ7Z2Y5 1582 aa13.96□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 CARD14Q9BXL6 1004 aa13.95□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 KIF20BQ96Q89 1820 aa13.94□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 COG3Q96JB2 828 aa13.93□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 SBNO1A3KN83 1393 aa13.93□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 RALBP1Q15311 655 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 ABTB2Q8N961 1025 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 AHDC1Q5TGY3 1603 aaPredicted RBP13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 PXDNQ92626 1479 aa13.92□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 SSH2Q76I76 1423 aa13.9□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 NME9Q86XW9 330 aa13.9□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 GGNBP2Q9H3C7 697 aa13.9□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
LIMD1-AS1-202ENST00000429798 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 FYB1O15117 783 aa13.89□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 NLRP6P59044 892 aa13.89□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 DDX17Q92841 729 aaKnown RBP13.89□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 PHLPP1O60346 1717 aa13.89□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 PARD3Q8TEW0 1356 aa13.88□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 USP31Q70CQ4 1352 aa13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 SPATA31A3Q5VYP0 1347 aa13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 MYBBP1AQ9BQG0 1328 aaKnown RBP13.87□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 ALS2Q96Q42 1657 aa13.86□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.19
LIMD1-AS1-202ENST00000429798 COL16A1Q07092 1604 aaPredicted RBP13.83□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 SOX12O15370 315 aa13.83□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 ZBTB22O15209 634 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 CFAP53Q96M91 514 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 ZRANB1Q9UGI0 708 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 USP19O94966 1318 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 AATKQ6ZMQ8 1374 aa13.82□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 SLIT3O75094 1523 aa13.8□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 MIER1Q8N108 512 aa13.8□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 CCER2I3L3R5 266 aa13.79□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 PNPLA6Q8IY17 1366 aa13.79□□□□□ -0.2
LIMD1-AS1-202ENST00000429798 JCADQ9P266 1359 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms