RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 NRKQ7Z2Y5 1582 aa24.67■■□□□ 1.54
CTSD-203ENST00000429746 NGLY1Q96IV0 654 aa24.67■■□□□ 1.54
CTSD-203ENST00000429746 CABP1Q9NZU7 370 aa24.67■■□□□ 1.54
CTSD-203ENST00000429746 CPSF1Q10570 1443 aaKnown RBP24.66■■□□□ 1.54
CTSD-203ENST00000429746 ARHGEF10O15013 1369 aa24.66■■□□□ 1.54
CTSD-203ENST00000429746 USP6P35125 1406 aa24.65■■□□□ 1.54
CTSD-203ENST00000429746 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
CTSD-203ENST00000429746 MON2Q7Z3U7 1717 aa24.64■■□□□ 1.54
CTSD-203ENST00000429746 ADAMTS2O95450 1211 aa24.64■■□□□ 1.54
CTSD-203ENST00000429746 QTRT2Q9H974 415 aaKnown RBP24.64■■□□□ 1.54
CTSD-203ENST00000429746 PHRF1Q9P1Y6 1649 aaKnown RBP24.64■■□□□ 1.53
CTSD-203ENST00000429746 RBM6P78332 1123 aaKnown RBP24.63■■□□□ 1.53
CTSD-203ENST00000429746 FNBP4Q8N3X1 1017 aaPredicted RBP24.63■■□□□ 1.53
CTSD-203ENST00000429746 CABLES1Q8TDN4 633 aa24.62■■□□□ 1.53
CTSD-203ENST00000429746 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
CTSD-203ENST00000429746 PIK3C2AO00443 1686 aa24.61■■□□□ 1.53
CTSD-203ENST00000429746 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
CTSD-203ENST00000429746 SLIT2O94813 1529 aa24.58■■□□□ 1.53
CTSD-203ENST00000429746 USP21Q9UK80 565 aa24.58■■□□□ 1.53
CTSD-203ENST00000429746 TRPC5Q9UL62 973 aaPredicted RBP24.58■■□□□ 1.53
CTSD-203ENST00000429746 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.52
CTSD-203ENST00000429746 MYOM1P52179 1685 aa24.56■■□□□ 1.52
CTSD-203ENST00000429746 PLCH1Q4KWH8 1693 aa24.56■■□□□ 1.52
CTSD-203ENST00000429746 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.56■■□□□ 1.52
CTSD-203ENST00000429746 PAK3O75914 559 aaPredicted RBP24.54■■□□□ 1.52
CTSD-203ENST00000429746 LMOD2Q6P5Q4 547 aa24.54■■□□□ 1.52
CTSD-203ENST00000429746 SLC12A5Q9H2X9 1139 aa24.54■■□□□ 1.52
CTSD-203ENST00000429746 USP19O94966 1318 aa24.54■■□□□ 1.52
CTSD-203ENST00000429746 USP54Q70EL1 1684 aa24.53■■□□□ 1.52
CTSD-203ENST00000429746 NRAPQ86VF7 1730 aa24.52■■□□□ 1.52
CTSD-203ENST00000429746 NWD2Q9ULI1 1742 aa24.52■■□□□ 1.52
CTSD-203ENST00000429746 SLIT3O75094 1523 aa24.52■■□□□ 1.52
CTSD-203ENST00000429746 UPF1Q92900 1129 aaKnown RBP eCLIP24.51■■□□□ 1.515e-13■■■■■ 46.7
CTSD-203ENST00000429746 A0A1W2PP64 1363 aa24.51■■□□□ 1.51
CTSD-203ENST00000429746 ATRNO75882 1429 aa24.51■■□□□ 1.51
CTSD-203ENST00000429746 NUTM2GQ5VZR2 741 aa24.5■■□□□ 1.51
CTSD-203ENST00000429746 TTC21BQ7Z4L5 1316 aa24.5■■□□□ 1.51
CTSD-203ENST00000429746 HSPA5P11021 654 aaKnown RBP24.49■■□□□ 1.51
CTSD-203ENST00000429746 ZNF692Q9BU19 519 aaPredicted RBP24.49■■□□□ 1.51
CTSD-203ENST00000429746 KTN1Q86UP2 1357 aaKnown RBP24.49■■□□□ 1.51
CTSD-203ENST00000429746 COL14A1Q05707 1796 aaKnown RBP24.49■■□□□ 1.51
CTSD-203ENST00000429746 RGS12O14924 1447 aa24.48■■□□□ 1.51
CTSD-203ENST00000429746 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
CTSD-203ENST00000429746 PLEKHG5O94827 1062 aa24.48■■□□□ 1.51
CTSD-203ENST00000429746 TMF1P82094 1093 aa24.48■■□□□ 1.51
CTSD-203ENST00000429746 NINLQ9Y2I6 1382 aa24.48■■□□□ 1.51
CTSD-203ENST00000429746 FAM83GA6ND36 823 aa24.47■■□□□ 1.51
CTSD-203ENST00000429746 ABTB2Q8N961 1025 aa24.47■■□□□ 1.51
CTSD-203ENST00000429746 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
CTSD-203ENST00000429746 HAP1P54257 671 aaPredicted RBP24.44■■□□□ 1.5
CTSD-203ENST00000429746 EIF4G2P78344 907 aaKnown RBP eCLIP24.44■■□□□ 1.5
CTSD-203ENST00000429746 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
CTSD-203ENST00000429746 TMC1Q8TDI8 760 aa24.44■■□□□ 1.5
CTSD-203ENST00000429746 GLI3P10071 1580 aa24.44■■□□□ 1.5
CTSD-203ENST00000429746 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
CTSD-203ENST00000429746 TTC21AQ8NDW8 1320 aa24.43■■□□□ 1.5
CTSD-203ENST00000429746 CPDO75976 1380 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 KIAA0232Q92628 1395 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 COL18A1P39060 1754 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 NFAT5O94916 1531 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
CTSD-203ENST00000429746 USP31Q70CQ4 1352 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 ANKRD36BQ8N2N9 1353 aa24.42■■□□□ 1.5
CTSD-203ENST00000429746 C11orf95C9JLR9 678 aaPredicted RBP24.4■■□□□ 1.5
CTSD-203ENST00000429746 NLRP13Q86W25 1043 aa24.4■■□□□ 1.5
CTSD-203ENST00000429746 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
CTSD-203ENST00000429746 GCP02774 474 aa24.39■■□□□ 1.49
CTSD-203ENST00000429746 OVOS2A0A0J9YW53 1432 aa24.38■■□□□ 1.49
CTSD-203ENST00000429746 OVOS2Q6IE36 1432 aa24.38■■□□□ 1.49
CTSD-203ENST00000429746 CAMTA1Q9Y6Y1 1673 aa24.38■■□□□ 1.49
CTSD-203ENST00000429746 NLRP6P59044 892 aa24.38■■□□□ 1.49
CTSD-203ENST00000429746 HDGFL2Q7Z4V5 671 aaPredicted RBP24.37■■□□□ 1.49
CTSD-203ENST00000429746 NME9Q86XW9 330 aa24.37■■□□□ 1.49
CTSD-203ENST00000429746 TERF2IPQ9NYB0 399 aa24.37■■□□□ 1.49
CTSD-203ENST00000429746 ZC3H6P61129 1189 aaKnown RBP24.36■■□□□ 1.49
CTSD-203ENST00000429746 CDCA8Q53HL2 280 aa24.35■■□□□ 1.49
CTSD-203ENST00000429746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
CTSD-203ENST00000429746 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
CTSD-203ENST00000429746 VPS72Q15906 364 aa24.34■■□□□ 1.49
CTSD-203ENST00000429746 PRDM11Q9NQV5 511 aa24.34■■□□□ 1.49
CTSD-203ENST00000429746 BTG4Q9NY30 223 aa24.34■■□□□ 1.49
CTSD-203ENST00000429746 CARD14Q9BXL6 1004 aa24.33■■□□□ 1.49
CTSD-203ENST00000429746 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
CTSD-203ENST00000429746 RGPD5Q99666 1765 aa24.3■■□□□ 1.48
CTSD-203ENST00000429746 CCDC125Q86Z20 511 aa24.3■■□□□ 1.48
CTSD-203ENST00000429746 ONECUT3O60422 494 aaPredicted RBP24.29■■□□□ 1.48
CTSD-203ENST00000429746 ARHGEF25Q86VW2 580 aa24.29■■□□□ 1.48
CTSD-203ENST00000429746 LTN1O94822 1766 aa24.29■■□□□ 1.48
CTSD-203ENST00000429746 AATKQ6ZMQ8 1374 aa24.29■■□□□ 1.48
CTSD-203ENST00000429746 EP400Q96L91 3159 aa24.28■■□□□ 1.48
CTSD-203ENST00000429746 COL5A2P05997 1499 aaPredicted RBP24.27■■□□□ 1.48
CTSD-203ENST00000429746 BRWD3Q6RI45 1802 aa24.27■■□□□ 1.48
CTSD-203ENST00000429746 ABCC6O95255 1503 aa24.26■■□□□ 1.47
CTSD-203ENST00000429746 THSD7AQ9UPZ6 1657 aa24.26■■□□□ 1.47
CTSD-203ENST00000429746 FYB1O15117 783 aa24.25■■□□□ 1.47
CTSD-203ENST00000429746 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
CTSD-203ENST00000429746 SPATA31A5Q5VU36 1347 aa24.25■■□□□ 1.47
CTSD-203ENST00000429746 SPATA31A7Q8IWB4 1347 aa24.25■■□□□ 1.47
CTSD-203ENST00000429746 NSD3Q9BZ95 1437 aa24.25■■□□□ 1.47
CTSD-203ENST00000429746 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms