RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SYTL4Q96C24 671 aaPredicted RBP9.46□□□□□ -0.9
CNOT4-206ENST00000428680 DDX10Q13206 875 aaKnown RBP9.45□□□□□ -0.9
CNOT4-206ENST00000428680 KIAA1210Q9ULL0 1709 aa9.45□□□□□ -0.9
CNOT4-206ENST00000428680 NRXN3Q9Y4C0 1643 aa9.45□□□□□ -0.9
CNOT4-206ENST00000428680 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-206ENST00000428680 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-206ENST00000428680 NALCNQ8IZF0 1738 aa9.44□□□□□ -0.9
CNOT4-206ENST00000428680 TMF1P82094 1093 aa9.44□□□□□ -0.9
CNOT4-206ENST00000428680 ATRNO75882 1429 aa9.44□□□□□ -0.9
CNOT4-206ENST00000428680 MYO5BQ9ULV0 1848 aa9.44□□□□□ -0.9
CNOT4-206ENST00000428680 AFF2P51816 1311 aa9.44□□□□□ -0.9
CNOT4-206ENST00000428680 TNS3Q68CZ2 1445 aa9.43□□□□□ -0.9
CNOT4-206ENST00000428680 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
CNOT4-206ENST00000428680 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
CNOT4-206ENST00000428680 FMN2Q9NZ56 1722 aa9.43□□□□□ -0.9
CNOT4-206ENST00000428680 FNBP4Q8N3X1 1017 aaPredicted RBP9.43□□□□□ -0.9
CNOT4-206ENST00000428680 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
CNOT4-206ENST00000428680 ABCC6O95255 1503 aa9.43□□□□□ -0.9
CNOT4-206ENST00000428680 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
CNOT4-206ENST00000428680 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
CNOT4-206ENST00000428680 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
CNOT4-206ENST00000428680 YTHDC2Q9H6S0 1430 aaKnown RBP9.42□□□□□ -0.9
CNOT4-206ENST00000428680 MORC1Q86VD1 984 aa9.42□□□□□ -0.9
CNOT4-206ENST00000428680 TERF2IPQ9NYB0 399 aa9.41□□□□□ -0.9
CNOT4-206ENST00000428680 USP21Q9UK80 565 aa9.41□□□□□ -0.9
CNOT4-206ENST00000428680 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-206ENST00000428680 BAG6P46379 1132 aa9.41□□□□□ -0.9
CNOT4-206ENST00000428680 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
CNOT4-206ENST00000428680 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
CNOT4-206ENST00000428680 QTRT2Q9H974 415 aaKnown RBP9.41□□□□□ -0.9
CNOT4-206ENST00000428680 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
CNOT4-206ENST00000428680 COL14A1Q05707 1796 aaKnown RBP9.4□□□□□ -0.9
CNOT4-206ENST00000428680 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.9
CNOT4-206ENST00000428680 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.91
CNOT4-206ENST00000428680 PTPRUQ92729 1446 aa9.4□□□□□ -0.91
CNOT4-206ENST00000428680 THRAP3Q9Y2W1 955 aaKnown RBP9.4□□□□□ -0.91
CNOT4-206ENST00000428680 MPHOSPH9Q99550 1183 aa9.39□□□□□ -0.91
CNOT4-206ENST00000428680 VPS72Q15906 364 aa9.39□□□□□ -0.91
CNOT4-206ENST00000428680 UNC5CLQ8IV45 518 aa9.39□□□□□ -0.91
CNOT4-206ENST00000428680 HIRIP3Q9BW71 556 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-206ENST00000428680 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
CNOT4-206ENST00000428680 PHF8Q9UPP1 1060 aa9.39□□□□□ -0.91
CNOT4-206ENST00000428680 PUS7Q96PZ0 661 aaKnown RBP9.38□□□□□ -0.91
CNOT4-206ENST00000428680 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 FRAT2O75474 233 aaPredicted RBP9.37□□□□□ -0.91
CNOT4-206ENST00000428680 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
CNOT4-206ENST00000428680 USP35Q9P2H5 1018 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 METP08581 1390 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 PXDNQ92626 1479 aa9.37□□□□□ -0.91
CNOT4-206ENST00000428680 UPF1Q92900 1129 aaKnown RBP eCLIP9.36□□□□□ -0.91
CNOT4-206ENST00000428680 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
CNOT4-206ENST00000428680 USP32Q8NFA0 1604 aa9.36□□□□□ -0.91
CNOT4-206ENST00000428680 NBPF8Q3BBV2 869 aa9.36□□□□□ -0.91
CNOT4-206ENST00000428680 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
CNOT4-206ENST00000428680 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
CNOT4-206ENST00000428680 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
CNOT4-206ENST00000428680 FTSJ3Q8IY81 847 aaKnown RBP9.35□□□□□ -0.91
CNOT4-206ENST00000428680 C8orf37Q96NL8 207 aa9.35□□□□□ -0.91
CNOT4-206ENST00000428680 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
CNOT4-206ENST00000428680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.917e-7■■■■□ 23.2
CNOT4-206ENST00000428680 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-206ENST00000428680 POTEAQ6S8J7 498 aa9.34□□□□□ -0.91
CNOT4-206ENST00000428680 LRP6O75581 1613 aa9.34□□□□□ -0.91
CNOT4-206ENST00000428680 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-206ENST00000428680 DISP2A7MBM2 1401 aa9.34□□□□□ -0.91
CNOT4-206ENST00000428680 LRP5O75197 1615 aa9.34□□□□□ -0.91
CNOT4-206ENST00000428680 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 SLIT2O94813 1529 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 TAOK2Q9UL54 1235 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
CNOT4-206ENST00000428680 FGD1P98174 961 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 KCNH5Q8NCM2 988 aa9.33□□□□□ -0.92
CNOT4-206ENST00000428680 GORABQ5T7V8 394 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 PLEKHG2Q9H7P9 1386 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 RGS12O14924 1447 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 PDE3BQ13370 1112 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 NLRP13Q86W25 1043 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 TTC21AQ8NDW8 1320 aa9.32□□□□□ -0.92
CNOT4-206ENST00000428680 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
CNOT4-206ENST00000428680 NLRP2Q9NX02 1062 aa9.31□□□□□ -0.92
CNOT4-206ENST00000428680 RAPGEF4Q8WZA2 1011 aa9.31□□□□□ -0.92
CNOT4-206ENST00000428680 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
CNOT4-206ENST00000428680 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
CNOT4-206ENST00000428680 TTC5Q8N0Z6 440 aa9.3□□□□□ -0.92
CNOT4-206ENST00000428680 U2AF1L5P0DN76 240 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-206ENST00000428680 KCNJ4P48050 445 aa9.3□□□□□ -0.92
CNOT4-206ENST00000428680 U2AF1Q01081 240 aaKnown RBP eCLIP9.3□□□□□ -0.923e-20■■■■■ 41.5
CNOT4-206ENST00000428680 RGS17Q9UGC6 210 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-206ENST00000428680 MINK1Q8N4C8 1332 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-206ENST00000428680 CPDO75976 1380 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 NCBP3Q53F19 620 aaKnown RBP9.29□□□□□ -0.92
CNOT4-206ENST00000428680 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 CWC22Q9HCG8 908 aaKnown RBP9.29□□□□□ -0.92
CNOT4-206ENST00000428680 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms