RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 KCNQ2O43526 872 aa17.43■□□□□ 0.38
DDX39B-209ENST00000428450 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
DDX39B-209ENST00000428450 NBPF14Q5TI25 921 aa17.43■□□□□ 0.38
DDX39B-209ENST00000428450 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
DDX39B-209ENST00000428450 PPP1R1BQ9UD71 204 aaPredicted RBP17.43■□□□□ 0.38
DDX39B-209ENST00000428450 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
DDX39B-209ENST00000428450 NUP188Q5SRE5 1749 aa17.42■□□□□ 0.38
DDX39B-209ENST00000428450 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
DDX39B-209ENST00000428450 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
DDX39B-209ENST00000428450 ALS2Q96Q42 1657 aa17.41■□□□□ 0.38
DDX39B-209ENST00000428450 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
DDX39B-209ENST00000428450 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.38
DDX39B-209ENST00000428450 SAFB2Q14151 953 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDX39B-209ENST00000428450 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
DDX39B-209ENST00000428450 PRDM11Q9NQV5 511 aa17.39■□□□□ 0.37
DDX39B-209ENST00000428450 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
DDX39B-209ENST00000428450 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
DDX39B-209ENST00000428450 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
DDX39B-209ENST00000428450 CRYBG1Q9Y4K1 1723 aa17.37■□□□□ 0.37
DDX39B-209ENST00000428450 ACIN1Q9UKV3 1341 aaKnown RBP17.37■□□□□ 0.37
DDX39B-209ENST00000428450 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
DDX39B-209ENST00000428450 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
DDX39B-209ENST00000428450 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
DDX39B-209ENST00000428450 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
DDX39B-209ENST00000428450 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
DDX39B-209ENST00000428450 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
DDX39B-209ENST00000428450 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
DDX39B-209ENST00000428450 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
DDX39B-209ENST00000428450 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
DDX39B-209ENST00000428450 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
DDX39B-209ENST00000428450 PRR36Q9H6K5 1346 aa17.34■□□□□ 0.37
DDX39B-209ENST00000428450 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
DDX39B-209ENST00000428450 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
DDX39B-209ENST00000428450 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
DDX39B-209ENST00000428450 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
DDX39B-209ENST00000428450 POGKQ9P215 609 aa17.3■□□□□ 0.36
DDX39B-209ENST00000428450 CEP350Q5VT06 3117 aa17.29■□□□□ 0.36
DDX39B-209ENST00000428450 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
DDX39B-209ENST00000428450 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
DDX39B-209ENST00000428450 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
DDX39B-209ENST00000428450 DLC1Q96QB1 1528 aa17.29■□□□□ 0.36
DDX39B-209ENST00000428450 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
DDX39B-209ENST00000428450 PTGER2P43116 358 aa17.28■□□□□ 0.36
DDX39B-209ENST00000428450 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
DDX39B-209ENST00000428450 PLSCR1O15162 318 aa17.27■□□□□ 0.36
DDX39B-209ENST00000428450 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
DDX39B-209ENST00000428450 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
DDX39B-209ENST00000428450 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.35
DDX39B-209ENST00000428450 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
DDX39B-209ENST00000428450 EVA1CP58658 441 aa17.26■□□□□ 0.35
DDX39B-209ENST00000428450 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
DDX39B-209ENST00000428450 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
DDX39B-209ENST00000428450 MINK1Q8N4C8 1332 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-209ENST00000428450 ZBTB7AO95365 584 aa17.24■□□□□ 0.35
DDX39B-209ENST00000428450 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
DDX39B-209ENST00000428450 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
DDX39B-209ENST00000428450 PROM2Q8N271 834 aa17.23■□□□□ 0.35
DDX39B-209ENST00000428450 SYT17Q9BSW7 474 aa17.23■□□□□ 0.35
DDX39B-209ENST00000428450 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
DDX39B-209ENST00000428450 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
DDX39B-209ENST00000428450 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
DDX39B-209ENST00000428450 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
DDX39B-209ENST00000428450 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
DDX39B-209ENST00000428450 MYOM1P52179 1685 aa17.22■□□□□ 0.35
DDX39B-209ENST00000428450 RGPD3A6NKT7 1758 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-209ENST00000428450 RGPD4Q7Z3J3 1758 aa17.21■□□□□ 0.35
DDX39B-209ENST00000428450 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
DDX39B-209ENST00000428450 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
DDX39B-209ENST00000428450 FHDC1Q9C0D6 1143 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-209ENST00000428450 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
DDX39B-209ENST00000428450 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
DDX39B-209ENST00000428450 CHD4Q14839 1912 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 PARP4Q9UKK3 1724 aaKnown RBP17.19■□□□□ 0.34
DDX39B-209ENST00000428450 CPDO75976 1380 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
DDX39B-209ENST00000428450 ATP7BP35670 1465 aa17.18■□□□□ 0.34
DDX39B-209ENST00000428450 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
DDX39B-209ENST00000428450 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
DDX39B-209ENST00000428450 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
DDX39B-209ENST00000428450 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
DDX39B-209ENST00000428450 SBF2Q86WG5 1849 aa17.17■□□□□ 0.34
DDX39B-209ENST00000428450 COL5A2P05997 1499 aaPredicted RBP17.14■□□□□ 0.33
DDX39B-209ENST00000428450 USP19O94966 1318 aa17.14■□□□□ 0.33
DDX39B-209ENST00000428450 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
DDX39B-209ENST00000428450 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
DDX39B-209ENST00000428450 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
DDX39B-209ENST00000428450 CRB1P82279 1406 aa17.13■□□□□ 0.33
DDX39B-209ENST00000428450 GCP02774 474 aa17.12■□□□□ 0.33
DDX39B-209ENST00000428450 DDB1Q16531 1140 aa17.12■□□□□ 0.33
DDX39B-209ENST00000428450 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
DDX39B-209ENST00000428450 STK32BQ9NY57 414 aa17.12■□□□□ 0.33
DDX39B-209ENST00000428450 ACEP12821 1306 aa17.12■□□□□ 0.33
DDX39B-209ENST00000428450 TXNRD1Q16881 649 aa17.11■□□□□ 0.33
DDX39B-209ENST00000428450 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
DDX39B-209ENST00000428450 BCL9O00512 1426 aa17.11■□□□□ 0.33
DDX39B-209ENST00000428450 LRRC37A3O60309 1634 aa17.1■□□□□ 0.33
DDX39B-209ENST00000428450 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms