RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 ACEP12821 1306 aa20.9■□□□□ 0.94
TVP23C-203ENST00000428082 CADPS2Q86UW7 1296 aa20.9■□□□□ 0.94
TVP23C-203ENST00000428082 RNF123Q5XPI4 1314 aa20.9■□□□□ 0.94
TVP23C-203ENST00000428082 C1orf167Q5SNV9 1468 aa20.9■□□□□ 0.94
TVP23C-203ENST00000428082 INSRP06213 1382 aa20.89■□□□□ 0.94
TVP23C-203ENST00000428082 MON2Q7Z3U7 1717 aa20.88■□□□□ 0.93
TVP23C-203ENST00000428082 ESCO1Q5FWF5 840 aa20.88■□□□□ 0.93
TVP23C-203ENST00000428082 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
TVP23C-203ENST00000428082 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
TVP23C-203ENST00000428082 PHF8Q9UPP1 1060 aa20.87■□□□□ 0.93
TVP23C-203ENST00000428082 POLR3AO14802 1390 aaPredicted RBP20.87■□□□□ 0.93
TVP23C-203ENST00000428082 CC2D1BQ5T0F9 858 aaKnown RBP20.86■□□□□ 0.93
TVP23C-203ENST00000428082 NGDNQ8NEJ9 315 aaKnown RBP20.86■□□□□ 0.93
TVP23C-203ENST00000428082 ANP32EQ9BTT0 268 aa20.86■□□□□ 0.93
TVP23C-203ENST00000428082 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
TVP23C-203ENST00000428082 PDE3BQ13370 1112 aa20.84■□□□□ 0.93
TVP23C-203ENST00000428082 USP6P35125 1406 aa20.83■□□□□ 0.93
TVP23C-203ENST00000428082 EDC4Q6P2E9 1401 aaKnown RBP20.83■□□□□ 0.93
TVP23C-203ENST00000428082 NRKQ7Z2Y5 1582 aa20.83■□□□□ 0.93
TVP23C-203ENST00000428082 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
TVP23C-203ENST00000428082 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
TVP23C-203ENST00000428082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.926e-8■■■■□ 26.3
TVP23C-203ENST00000428082 KIF1AQ12756 1690 aa20.82■□□□□ 0.92
TVP23C-203ENST00000428082 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
TVP23C-203ENST00000428082 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
TVP23C-203ENST00000428082 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
TVP23C-203ENST00000428082 FOXO3O43524 673 aa20.79■□□□□ 0.92
TVP23C-203ENST00000428082 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
TVP23C-203ENST00000428082 FYB1O15117 783 aa20.78■□□□□ 0.92
TVP23C-203ENST00000428082 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
TVP23C-203ENST00000428082 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
TVP23C-203ENST00000428082 GGNBP2Q9H3C7 697 aa20.77■□□□□ 0.92
TVP23C-203ENST00000428082 BRINP3Q76B58 766 aa20.76■□□□□ 0.91
TVP23C-203ENST00000428082 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
TVP23C-203ENST00000428082 NSD2O96028 1365 aa20.76■□□□□ 0.91
TVP23C-203ENST00000428082 PSME1Q06323 249 aa20.76■□□□□ 0.91
TVP23C-203ENST00000428082 NME9Q86XW9 330 aa20.76■□□□□ 0.91
TVP23C-203ENST00000428082 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
TVP23C-203ENST00000428082 DDX17Q92841 729 aaKnown RBP20.74■□□□□ 0.91
TVP23C-203ENST00000428082 ZRANB1Q9UGI0 708 aa20.74■□□□□ 0.91
TVP23C-203ENST00000428082 MORC1Q86VD1 984 aa20.72■□□□□ 0.91
TVP23C-203ENST00000428082 TTC21AQ8NDW8 1320 aa20.72■□□□□ 0.91
TVP23C-203ENST00000428082 PAK3O75914 559 aaPredicted RBP20.72■□□□□ 0.91
TVP23C-203ENST00000428082 PIK3C2AO00443 1686 aa20.72■□□□□ 0.91
TVP23C-203ENST00000428082 TRPM3Q9HCF6 1732 aaPredicted RBP20.71■□□□□ 0.91
TVP23C-203ENST00000428082 BLMP54132 1417 aaPredicted RBP20.71■□□□□ 0.91
TVP23C-203ENST00000428082 KRT28Q7Z3Y7 464 aa20.71■□□□□ 0.91
TVP23C-203ENST00000428082 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.91
TVP23C-203ENST00000428082 TNNT2P45379 298 aaPredicted RBP20.7■□□□□ 0.9
TVP23C-203ENST00000428082 NPHP3Q7Z494 1330 aa20.69■□□□□ 0.9
TVP23C-203ENST00000428082 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
TVP23C-203ENST00000428082 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
TVP23C-203ENST00000428082 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
TVP23C-203ENST00000428082 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 PXDNQ92626 1479 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 ABTB2Q8N961 1025 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 COG3Q96JB2 828 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 OVOS2A0A0J9YW53 1432 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 OVOS2Q6IE36 1432 aa20.67■□□□□ 0.9
TVP23C-203ENST00000428082 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
TVP23C-203ENST00000428082 MARF1Q9Y4F3 1742 aaKnown RBP20.66■□□□□ 0.9
TVP23C-203ENST00000428082 NHSL1Q5SYE7 1610 aa20.66■□□□□ 0.9
TVP23C-203ENST00000428082 RRP1P56182 461 aaKnown RBP20.66■□□□□ 0.9
TVP23C-203ENST00000428082 RCAN3Q9UKA8 241 aa20.66■□□□□ 0.9
TVP23C-203ENST00000428082 TOM1O60784 492 aa20.65■□□□□ 0.9
TVP23C-203ENST00000428082 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
TVP23C-203ENST00000428082 NLRP6P59044 892 aa20.65■□□□□ 0.9
TVP23C-203ENST00000428082 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
TVP23C-203ENST00000428082 ALS2Q96Q42 1657 aa20.64■□□□□ 0.89
TVP23C-203ENST00000428082 FBLN1P23142 703 aa20.63■□□□□ 0.89
TVP23C-203ENST00000428082 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
TVP23C-203ENST00000428082 SBNO1A3KN83 1393 aa20.62■□□□□ 0.89
TVP23C-203ENST00000428082 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
TVP23C-203ENST00000428082 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
TVP23C-203ENST00000428082 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
TVP23C-203ENST00000428082 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
TVP23C-203ENST00000428082 TNS3Q68CZ2 1445 aa20.6■□□□□ 0.89
TVP23C-203ENST00000428082 SPATA31A3Q5VYP0 1347 aa20.59■□□□□ 0.89
TVP23C-203ENST00000428082 AHDC1Q5TGY3 1603 aaPredicted RBP20.58■□□□□ 0.88
TVP23C-203ENST00000428082 SOX12O15370 315 aa20.58■□□□□ 0.88
TVP23C-203ENST00000428082 MTHFSP49914 203 aa20.58■□□□□ 0.88
TVP23C-203ENST00000428082 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.88
TVP23C-203ENST00000428082 ERICH6Q7L0X2 663 aa20.57■□□□□ 0.88
TVP23C-203ENST00000428082 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
TVP23C-203ENST00000428082 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
TVP23C-203ENST00000428082 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
TVP23C-203ENST00000428082 RRS1Q15050 365 aaKnown RBP20.55■□□□□ 0.88
TVP23C-203ENST00000428082 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
TVP23C-203ENST00000428082 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-203ENST00000428082 ARHGEF10O15013 1369 aa20.54■□□□□ 0.88
TVP23C-203ENST00000428082 PHLPP1O60346 1717 aa20.54■□□□□ 0.88
TVP23C-203ENST00000428082 USP19O94966 1318 aa20.54■□□□□ 0.88
TVP23C-203ENST00000428082 SLIT3O75094 1523 aa20.53■□□□□ 0.88
TVP23C-203ENST00000428082 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
TVP23C-203ENST00000428082 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
TVP23C-203ENST00000428082 MSH5O43196 834 aa20.53■□□□□ 0.88
TVP23C-203ENST00000428082 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
TVP23C-203ENST00000428082 CRYBG1Q9Y4K1 1723 aa20.52■□□□□ 0.88
TVP23C-203ENST00000428082 NFAT5O94916 1531 aa20.52■□□□□ 0.87
TVP23C-203ENST00000428082 PHRF1Q9P1Y6 1649 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms