RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 MCM2P49736 904 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 PDE4AP27815 886 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
SP1-202ENST00000426431 BRMS1Q9HCU9 246 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 NUCB2P80303 420 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
SP1-202ENST00000426431 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 CDC45O75419 566 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 EXOC6Q8TAG9 804 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
SP1-202ENST00000426431 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 GNAI2P04899 355 aa12.33□□□□□ -0.44
SP1-202ENST00000426431 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
SP1-202ENST00000426431 NBPF1Q3BBV0 1214 aa12.32□□□□□ -0.44
SP1-202ENST00000426431 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
SP1-202ENST00000426431 DUOX2Q9NRD8 1548 aa12.32□□□□□ -0.44
SP1-202ENST00000426431 PLCH2O75038 1416 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.44
SP1-202ENST00000426431 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 ZSCAN25Q6NSZ9 544 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 NFXL1Q6ZNB6 911 aa12.31□□□□□ -0.44
SP1-202ENST00000426431 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
SP1-202ENST00000426431 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
SP1-202ENST00000426431 DHX16O60231 1041 aaKnown RBP12.3□□□□□ -0.44
SP1-202ENST00000426431 UGGT2Q9NYU1 1516 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
SP1-202ENST00000426431 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 AIMP1Q12904 312 aaKnown RBP12.29□□□□□ -0.44
SP1-202ENST00000426431 CCDC158Q5M9N0 1113 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 NOC3LQ8WTT2 800 aaKnown RBP12.29□□□□□ -0.44
SP1-202ENST00000426431 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
SP1-202ENST00000426431 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
SP1-202ENST00000426431 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
SP1-202ENST00000426431 BECN2A8MW95 431 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
SP1-202ENST00000426431 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
SP1-202ENST00000426431 PLIN1O60240 522 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 STARD3NLO95772 234 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 PDCP20941 246 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 SMC3Q9UQE7 1217 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 WDR7Q9Y4E6 1490 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 TNRQ92752 1358 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
SP1-202ENST00000426431 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.44
SP1-202ENST00000426431 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.44
SP1-202ENST00000426431 NFE2L2Q16236 605 aa12.27□□□□□ -0.44
SP1-202ENST00000426431 WASHC4Q2M389 1173 aa12.27□□□□□ -0.44
SP1-202ENST00000426431 DNAJC5BQ9UF47 199 aa12.27□□□□□ -0.44
SP1-202ENST00000426431 NOL8Q76FK4 1167 aaKnown RBP12.27□□□□□ -0.45
SP1-202ENST00000426431 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
SP1-202ENST00000426431 CCDC43Q96MW1 224 aaKnown RBP12.27□□□□□ -0.45
SP1-202ENST00000426431 MCTP1Q6DN14 999 aa12.27□□□□□ -0.45
SP1-202ENST00000426431 SURF6O75683 361 aaKnown RBP12.27□□□□□ -0.45
SP1-202ENST00000426431 NUP160Q12769 1436 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
SP1-202ENST00000426431 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 NACAP1Q9BZK3 213 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 GPATCH8Q9UKJ3 1502 aaKnown RBP12.26□□□□□ -0.45
SP1-202ENST00000426431 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
SP1-202ENST00000426431 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
SP1-202ENST00000426431 ADAMTS12P58397 1594 aa12.25□□□□□ -0.45
SP1-202ENST00000426431 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
SP1-202ENST00000426431 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
SP1-202ENST00000426431 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
SP1-202ENST00000426431 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
SP1-202ENST00000426431 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
SP1-202ENST00000426431 HSP90AB3PQ58FF7 597 aa12.25□□□□□ -0.45
SP1-202ENST00000426431 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
SP1-202ENST00000426431 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 A2MP01023 1474 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 CCDC70Q6NSX1 233 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
SP1-202ENST00000426431 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
SP1-202ENST00000426431 TEX13AQ9BXU3 409 aaPredicted RBP12.24□□□□□ -0.45
SP1-202ENST00000426431 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 LNPKQ9C0E8 428 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
SP1-202ENST00000426431 BTBD11A6QL63 1104 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
SP1-202ENST00000426431 ATF7IPQ6VMQ6 1270 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
SP1-202ENST00000426431 GOLGA6L1Q8N7Z2 621 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms