RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-207ENST00000426150 FBXO45P0C2W1 286 aa10.66□□□□□ -0.7
SSBP3-207ENST00000426150 FKBPLQ9UIM3 349 aa10.66□□□□□ -0.7
SSBP3-207ENST00000426150 JUNDP17535 347 aa10.65□□□□□ -0.7
SSBP3-207ENST00000426150 PTPRNQ16849 979 aa10.65□□□□□ -0.7
SSBP3-207ENST00000426150 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
SSBP3-207ENST00000426150 USTQ9Y2C2 406 aa10.65□□□□□ -0.7
SSBP3-207ENST00000426150 ZBBXA8MT70 800 aa10.64□□□□□ -0.71
SSBP3-207ENST00000426150 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
SSBP3-207ENST00000426150 WNT2BQ93097 391 aa10.64□□□□□ -0.71
SSBP3-207ENST00000426150 MAP10Q9P2G4 905 aa10.64□□□□□ -0.71
SSBP3-207ENST00000426150 MAFBQ9Y5Q3 323 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-207ENST00000426150 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
SSBP3-207ENST00000426150 ZC3H4Q9UPT8 1303 aaKnown RBP10.62□□□□□ -0.71
SSBP3-207ENST00000426150 ATP9BO43861 1147 aa10.61□□□□□ -0.71
SSBP3-207ENST00000426150 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
SSBP3-207ENST00000426150 CTHP32929 405 aa10.6□□□□□ -0.71
SSBP3-207ENST00000426150 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
SSBP3-207ENST00000426150 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
SSBP3-207ENST00000426150 ATG7O95352 703 aa10.59□□□□□ -0.71
SSBP3-207ENST00000426150 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
SSBP3-207ENST00000426150 NACADO15069 1562 aa10.59□□□□□ -0.71
SSBP3-207ENST00000426150 POTEMA6NI47 508 aa10.58□□□□□ -0.72
SSBP3-207ENST00000426150 DXOO77932 396 aaKnown RBP10.58□□□□□ -0.72
SSBP3-207ENST00000426150 CCNYL3P0C7X3 344 aa10.58□□□□□ -0.72
SSBP3-207ENST00000426150 FAM160A2Q8N612 972 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-207ENST00000426150 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
SSBP3-207ENST00000426150 BRD1O95696 1058 aa10.57□□□□□ -0.72
SSBP3-207ENST00000426150 SPSB2Q99619 263 aa10.57□□□□□ -0.72
SSBP3-207ENST00000426150 EVA1BQ9NVM1 165 aa10.57□□□□□ -0.72
SSBP3-207ENST00000426150 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
SSBP3-207ENST00000426150 MMP16P51512 607 aa10.56□□□□□ -0.72
SSBP3-207ENST00000426150 NPM2Q86SE8 214 aaKnown RBP10.56□□□□□ -0.72
SSBP3-207ENST00000426150 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
SSBP3-207ENST00000426150 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-207ENST00000426150 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
SSBP3-207ENST00000426150 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
SSBP3-207ENST00000426150 ARMC2Q8NEN0 867 aa10.55□□□□□ -0.72
SSBP3-207ENST00000426150 NUDT12Q9BQG2 462 aa10.55□□□□□ -0.72
SSBP3-207ENST00000426150 GPSM3Q9Y4H4 160 aa10.55□□□□□ -0.72
SSBP3-207ENST00000426150 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-207ENST00000426150 COPS2P61201 443 aa10.54□□□□□ -0.72
SSBP3-207ENST00000426150 KCNA1Q09470 495 aa10.54□□□□□ -0.72
SSBP3-207ENST00000426150 KCNH2Q12809 1159 aa10.54□□□□□ -0.72
SSBP3-207ENST00000426150 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-207ENST00000426150 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.721e-8■■□□□ 12.3
SSBP3-207ENST00000426150 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
SSBP3-207ENST00000426150 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
SSBP3-207ENST00000426150 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
SSBP3-207ENST00000426150 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
SSBP3-207ENST00000426150 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
SSBP3-207ENST00000426150 UNC13AQ9UPW8 1703 aa10.53□□□□□ -0.72
SSBP3-207ENST00000426150 PTK2Q05397 1052 aa10.52□□□□□ -0.73
SSBP3-207ENST00000426150 TMCO4Q5TGY1 634 aa10.52□□□□□ -0.73
SSBP3-207ENST00000426150 CECR2Q9BXF3 1484 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 SKIP12755 728 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 NBPF14Q5TI25 921 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 FAM174AQ8TBP5 190 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 OCSTAMPQ9BR26 566 aa10.51□□□□□ -0.73
SSBP3-207ENST00000426150 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
SSBP3-207ENST00000426150 ZNF592Q92610 1267 aa10.5□□□□□ -0.73
SSBP3-207ENST00000426150 TLL1O43897 1013 aa10.49□□□□□ -0.73
SSBP3-207ENST00000426150 ADH1BP00325 375 aa10.49□□□□□ -0.73
SSBP3-207ENST00000426150 ELOAQ14241 798 aaKnown RBP10.49□□□□□ -0.73
SSBP3-207ENST00000426150 CEP126Q9P2H0 1117 aa10.49□□□□□ -0.73
SSBP3-207ENST00000426150 PCDHB9Q9Y5E1 797 aa10.49□□□□□ -0.73
SSBP3-207ENST00000426150 ZPR1O75312 459 aa10.48□□□□□ -0.73
SSBP3-207ENST00000426150 MCCD1P59942 119 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-207ENST00000426150 SLFNL1Q499Z3 407 aa10.47□□□□□ -0.73
SSBP3-207ENST00000426150 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
SSBP3-207ENST00000426150 DEPDC4Q8N2C3 294 aa10.47□□□□□ -0.73
SSBP3-207ENST00000426150 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
SSBP3-207ENST00000426150 PHTF2Q8N3S3 785 aa10.46□□□□□ -0.73
SSBP3-207ENST00000426150 ADAM32Q8TC27 787 aa10.46□□□□□ -0.73
SSBP3-207ENST00000426150 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
SSBP3-207ENST00000426150 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.73
SSBP3-207ENST00000426150 BICRAQ9NZM4 1560 aa10.46□□□□□ -0.74
SSBP3-207ENST00000426150 MFAP1P55081 439 aaKnown RBP10.45□□□□□ -0.74
SSBP3-207ENST00000426150 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
SSBP3-207ENST00000426150 STK32AQ8WU08 396 aa10.45□□□□□ -0.74
SSBP3-207ENST00000426150 MTRQ99707 1265 aa10.45□□□□□ -0.74
SSBP3-207ENST00000426150 UNC93B1Q9H1C4 597 aa10.45□□□□□ -0.74
SSBP3-207ENST00000426150 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
SSBP3-207ENST00000426150 TMEM164Q5U3C3 297 aa10.44□□□□□ -0.74
SSBP3-207ENST00000426150 PTCRAQ6ISU1 281 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-207ENST00000426150 SH3BP5LQ7L8J4 393 aa10.44□□□□□ -0.74
SSBP3-207ENST00000426150 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
SSBP3-207ENST00000426150 MKRN1Q9UHC7 482 aaKnown RBP10.44□□□□□ -0.74
SSBP3-207ENST00000426150 NOVA2Q9UNW9 492 aaKnown RBP10.44□□□□□ -0.74
SSBP3-207ENST00000426150 CC2D2AQ9P2K1 1620 aa10.44□□□□□ -0.74
SSBP3-207ENST00000426150 NCOA4Q13772 614 aa10.43□□□□□ -0.74
SSBP3-207ENST00000426150 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
SSBP3-207ENST00000426150 CHIC2Q9UKJ5 165 aa10.43□□□□□ -0.74
SSBP3-207ENST00000426150 CRTC2Q53ET0 693 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-207ENST00000426150 ZBTB33Q86T24 672 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms