RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 USP6P35125 1406 aa12.83□□□□□ -0.36
HDLBP-211ENST00000425989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.366e-7■■□□□ 13.3
HDLBP-211ENST00000425989 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
HDLBP-211ENST00000425989 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
HDLBP-211ENST00000425989 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
HDLBP-211ENST00000425989 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 MTHFSP49914 203 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 PSME1Q06323 249 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 PMFBP1Q8TBY8 1022 aa12.82□□□□□ -0.36
HDLBP-211ENST00000425989 MSH6P52701 1360 aa12.81□□□□□ -0.36
HDLBP-211ENST00000425989 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
HDLBP-211ENST00000425989 SSH2Q76I76 1423 aa12.81□□□□□ -0.36
HDLBP-211ENST00000425989 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
HDLBP-211ENST00000425989 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■□□□□ 8.9
HDLBP-211ENST00000425989 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
HDLBP-211ENST00000425989 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
HDLBP-211ENST00000425989 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
HDLBP-211ENST00000425989 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
HDLBP-211ENST00000425989 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
HDLBP-211ENST00000425989 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
HDLBP-211ENST00000425989 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
HDLBP-211ENST00000425989 NME9Q86XW9 330 aa12.78□□□□□ -0.36
HDLBP-211ENST00000425989 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
HDLBP-211ENST00000425989 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
HDLBP-211ENST00000425989 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-211ENST00000425989 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
HDLBP-211ENST00000425989 C1orf167Q5SNV9 1468 aa12.77□□□□□ -0.37
HDLBP-211ENST00000425989 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
HDLBP-211ENST00000425989 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
HDLBP-211ENST00000425989 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
HDLBP-211ENST00000425989 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
HDLBP-211ENST00000425989 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
HDLBP-211ENST00000425989 SOCS7O14512 581 aa12.75□□□□□ -0.37
HDLBP-211ENST00000425989 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
HDLBP-211ENST00000425989 NLRP6P59044 892 aa12.75□□□□□ -0.37
HDLBP-211ENST00000425989 LRRC7Q96NW7 1537 aa12.75□□□□□ -0.37
HDLBP-211ENST00000425989 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
HDLBP-211ENST00000425989 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
HDLBP-211ENST00000425989 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
HDLBP-211ENST00000425989 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
HDLBP-211ENST00000425989 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
HDLBP-211ENST00000425989 MST1RQ04912 1400 aa12.73□□□□□ -0.37
HDLBP-211ENST00000425989 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
HDLBP-211ENST00000425989 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-211ENST00000425989 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 BLMP54132 1417 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-211ENST00000425989 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
HDLBP-211ENST00000425989 FOXO3O43524 673 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 FCHSD2O94868 740 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 CERKQ8TCT0 537 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
HDLBP-211ENST00000425989 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.37
HDLBP-211ENST00000425989 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
HDLBP-211ENST00000425989 NEFMP07197 916 aa12.71□□□□□ -0.37
HDLBP-211ENST00000425989 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-211ENST00000425989 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDLBP-211ENST00000425989 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
HDLBP-211ENST00000425989 CDK12Q9NYV4 1490 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-211ENST00000425989 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-211ENST00000425989 CCDC27Q2M243 656 aa12.68□□□□□ -0.38
HDLBP-211ENST00000425989 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
HDLBP-211ENST00000425989 IL13P35225 146 aa12.67□□□□□ -0.38
HDLBP-211ENST00000425989 AMPHP49418 695 aa12.67□□□□□ -0.38
HDLBP-211ENST00000425989 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
HDLBP-211ENST00000425989 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
HDLBP-211ENST00000425989 ARHGEF10O15013 1369 aa12.66□□□□□ -0.38
HDLBP-211ENST00000425989 FLT4P35916 1363 aa12.66□□□□□ -0.38
HDLBP-211ENST00000425989 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
HDLBP-211ENST00000425989 GCP02774 474 aa12.65□□□□□ -0.38
HDLBP-211ENST00000425989 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
HDLBP-211ENST00000425989 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
HDLBP-211ENST00000425989 WDR63Q8IWG1 891 aa12.65□□□□□ -0.38
HDLBP-211ENST00000425989 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-211ENST00000425989 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 APAF1O14727 1248 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 IP6K1Q92551 441 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
HDLBP-211ENST00000425989 USP19O94966 1318 aa12.63□□□□□ -0.39
HDLBP-211ENST00000425989 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-211ENST00000425989 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
HDLBP-211ENST00000425989 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
HDLBP-211ENST00000425989 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-211ENST00000425989 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
HDLBP-211ENST00000425989 TOM1O60784 492 aa12.62□□□□□ -0.39
HDLBP-211ENST00000425989 FBLN1P23142 703 aa12.62□□□□□ -0.39
HDLBP-211ENST00000425989 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
HDLBP-211ENST00000425989 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
HDLBP-211ENST00000425989 HOXC9P31274 260 aa12.61□□□□□ -0.39
HDLBP-211ENST00000425989 EIF4A2Q14240 407 aaKnown RBP12.61□□□□□ -0.39
HDLBP-211ENST00000425989 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
HDLBP-211ENST00000425989 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
HDLBP-211ENST00000425989 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-211ENST00000425989 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
HDLBP-211ENST00000425989 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms