RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 XRCC6P12956 609 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■□□ 17.2
SMARCC1-202ENST00000425518 ANKRD45Q5TZF3 282 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 SMC5Q8IY18 1101 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 FOXD4L1Q9NU39 408 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 INO80Q9ULG1 1556 aaPredicted RBP9.47□□□□□ -0.89
SMARCC1-202ENST00000425518 THUMPD2Q9BTF0 503 aaKnown RBP9.46□□□□□ -0.89
SMARCC1-202ENST00000425518 MROH1Q8NDA8 1641 aa9.46□□□□□ -0.89
SMARCC1-202ENST00000425518 PANK2Q9BZ23 570 aa9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 HMOX1P09601 288 aa9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 PUS7Q96PZ0 661 aaKnown RBP9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 CABP1Q9NZU7 370 aa9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 NSD2O96028 1365 aa9.46□□□□□ -0.9
SMARCC1-202ENST00000425518 CD109Q6YHK3 1445 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 PPRC1Q5VV67 1664 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 NCBP3Q53F19 620 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 KIF16BQ96L93 1317 aa9.45□□□□□ -0.9
SMARCC1-202ENST00000425518 ZMYM3Q14202 1370 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 ADGRB3O60242 1522 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 ADGRB1O14514 1584 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 NUCB1Q02818 461 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 PNNQ9H307 717 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 NEURL4Q96JN8 1562 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 CDK19Q9BWU1 502 aa9.44□□□□□ -0.9
SMARCC1-202ENST00000425518 IL16Q14005 1332 aa9.43□□□□□ -0.9
SMARCC1-202ENST00000425518 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
SMARCC1-202ENST00000425518 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
SMARCC1-202ENST00000425518 ABCC11Q96J66 1382 aa9.43□□□□□ -0.9
SMARCC1-202ENST00000425518 PHACTR3Q96KR7 559 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 QRICH2Q9H0J4 1663 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 FCHSD2O94868 740 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 TSPYL6Q8N831 410 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
SMARCC1-202ENST00000425518 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 FSD2A1L4K1 749 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 TNPO1Q92973 898 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
SMARCC1-202ENST00000425518 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 POLKQ9UBT6 870 aa9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 VAMP4O75379 141 aa9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 SLC52A1Q9NWF4 448 aa9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
SMARCC1-202ENST00000425518 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.91
SMARCC1-202ENST00000425518 MRE11P49959 708 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 BMP2KLQ5H9B9 411 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 NAP1L5Q96NT1 182 aaPredicted RBP9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 EMILIN1Q9Y6C2 1016 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 NFE2L2Q16236 605 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 TBC1D9Q6ZT07 1266 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 GRPEL1Q9HAV7 217 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 GLI2P10070 1586 aa9.39□□□□□ -0.91
SMARCC1-202ENST00000425518 SNX21Q969T3 373 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 GCC1Q96CN9 775 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 GBP4Q96PP9 640 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 VIRMAQ69YN4 1812 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 APBB1O00213 710 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 DCTN1Q14203 1278 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 GNAI1P63096 354 aa9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 TWISTNBQ3B726 338 aaPredicted RBP9.38□□□□□ -0.91
SMARCC1-202ENST00000425518 SIRT2Q8IXJ6 389 aa9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 CHMP4BQ9H444 224 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 ABCC3O15438 1527 aa9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-202ENST00000425518 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 NME9Q86XW9 330 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 KIF2CQ99661 725 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 RRS1Q15050 365 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 PPLO60437 1756 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 YTHDC2Q9H6S0 1430 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms