RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 PRDM11Q9NQV5 511 aa9.53□□□□□ -0.88
LSM8-204ENST00000424702 POLR1AO95602 1720 aaPredicted RBP9.52□□□□□ -0.89
LSM8-204ENST00000424702 FKBP8Q14318 412 aa9.52□□□□□ -0.89
LSM8-204ENST00000424702 CCDC184Q52MB2 194 aa9.52□□□□□ -0.89
LSM8-204ENST00000424702 PLEKHH1Q9ULM0 1364 aa9.51□□□□□ -0.89
LSM8-204ENST00000424702 ATP7BP35670 1465 aa9.51□□□□□ -0.89
LSM8-204ENST00000424702 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
LSM8-204ENST00000424702 EDC4Q6P2E9 1401 aaKnown RBP9.51□□□□□ -0.89
LSM8-204ENST00000424702 TTC21BQ7Z4L5 1316 aa9.51□□□□□ -0.89
LSM8-204ENST00000424702 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
LSM8-204ENST00000424702 TULP4Q9NRJ4 1543 aa9.5□□□□□ -0.89
LSM8-204ENST00000424702 PPP2R1AP30153 589 aa9.5□□□□□ -0.89
LSM8-204ENST00000424702 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
LSM8-204ENST00000424702 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 ZBED9Q6R2W3 1325 aa9.49□□□□□ -0.89
LSM8-204ENST00000424702 DIAPH1O60610 1272 aaKnown RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 NPM2Q86SE8 214 aaKnown RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 XPCQ01831 940 aaPredicted RBP9.49□□□□□ -0.89
LSM8-204ENST00000424702 CHMP4AQ9BY43 222 aa9.49□□□□□ -0.89
LSM8-204ENST00000424702 U2AF1L5P0DN76 240 aaPredicted RBP9.48□□□□□ -0.89
LSM8-204ENST00000424702 U2AF1Q01081 240 aaKnown RBP eCLIP9.48□□□□□ -0.89
LSM8-204ENST00000424702 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
LSM8-204ENST00000424702 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
LSM8-204ENST00000424702 MYO5BQ9ULV0 1848 aa9.48□□□□□ -0.89
LSM8-204ENST00000424702 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
LSM8-204ENST00000424702 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
LSM8-204ENST00000424702 RTF1Q92541 710 aaKnown RBP9.48□□□□□ -0.89
LSM8-204ENST00000424702 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
LSM8-204ENST00000424702 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
LSM8-204ENST00000424702 SUPT16HQ9Y5B9 1047 aaKnown RBP9.47□□□□□ -0.89
LSM8-204ENST00000424702 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
LSM8-204ENST00000424702 NGEFQ8N5V2 710 aa9.47□□□□□ -0.89
LSM8-204ENST00000424702 ADGRB1O14514 1584 aa9.47□□□□□ -0.89
LSM8-204ENST00000424702 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
LSM8-204ENST00000424702 QRICH2Q9H0J4 1663 aa9.46□□□□□ -0.89
LSM8-204ENST00000424702 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.89
LSM8-204ENST00000424702 IFT172Q9UG01 1749 aa9.46□□□□□ -0.89
LSM8-204ENST00000424702 PARD3Q8TEW0 1356 aa9.46□□□□□ -0.89
LSM8-204ENST00000424702 PTPRUQ92729 1446 aa9.46□□□□□ -0.89
LSM8-204ENST00000424702 ORAI2Q96SN7 254 aa9.46□□□□□ -0.9
LSM8-204ENST00000424702 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
LSM8-204ENST00000424702 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
LSM8-204ENST00000424702 CDC42BPGQ6DT37 1551 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 NME9Q86XW9 330 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 NPC1L1Q9UHC9 1359 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 C1orf167Q5SNV9 1468 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 SBNO1A3KN83 1393 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 PDE3BQ13370 1112 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
LSM8-204ENST00000424702 IQSEC2Q5JU85 1478 aa9.44□□□□□ -0.9
LSM8-204ENST00000424702 CANXP27824 592 aaKnown RBP9.44□□□□□ -0.9
LSM8-204ENST00000424702 KNDC1Q76NI1 1749 aa9.44□□□□□ -0.9
LSM8-204ENST00000424702 TATP17735 454 aaPredicted RBP9.44□□□□□ -0.9
LSM8-204ENST00000424702 MTHFSP49914 203 aa9.44□□□□□ -0.9
LSM8-204ENST00000424702 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
LSM8-204ENST00000424702 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
LSM8-204ENST00000424702 BRINP3Q76B58 766 aa9.43□□□□□ -0.9
LSM8-204ENST00000424702 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
LSM8-204ENST00000424702 ZC3H6P61129 1189 aaKnown RBP9.43□□□□□ -0.9
LSM8-204ENST00000424702 IRX6P78412 446 aaPredicted RBP9.43□□□□□ -0.9
LSM8-204ENST00000424702 LRRC7Q96NW7 1537 aa9.43□□□□□ -0.9
LSM8-204ENST00000424702 USP6P35125 1406 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 NWD1Q149M9 1564 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.42□□□□□ -0.9
LSM8-204ENST00000424702 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
LSM8-204ENST00000424702 CARD14Q9BXL6 1004 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 STRN4Q9NRL3 753 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 JCADQ9P266 1359 aa9.42□□□□□ -0.9
LSM8-204ENST00000424702 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 TNS3Q68CZ2 1445 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
LSM8-204ENST00000424702 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 FLT4P35916 1363 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
LSM8-204ENST00000424702 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
LSM8-204ENST00000424702 CDCA7Q9BWT1 371 aaPredicted RBP9.4□□□□□ -0.9
LSM8-204ENST00000424702 ARHGEF28Q8N1W1 1705 aaKnown RBP9.4□□□□□ -0.9
LSM8-204ENST00000424702 KIF1AQ12756 1690 aa9.4□□□□□ -0.91
LSM8-204ENST00000424702 APAF1O14727 1248 aa9.4□□□□□ -0.91
LSM8-204ENST00000424702 FYB1O15117 783 aa9.4□□□□□ -0.91
LSM8-204ENST00000424702 SPATA31A6Q5VVP1 1343 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 SPATA31A3Q5VYP0 1347 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 MST1RQ04912 1400 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 GCP02774 474 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
LSM8-204ENST00000424702 KIF24Q5T7B8 1368 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 ADGRB2O60241 1585 aa9.39□□□□□ -0.91
LSM8-204ENST00000424702 POLR3AO14802 1390 aaPredicted RBP9.39□□□□□ -0.91
LSM8-204ENST00000424702 RUNDC1Q96C34 613 aa9.38□□□□□ -0.91
LSM8-204ENST00000424702 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
LSM8-204ENST00000424702 FBXO41Q8TF61 875 aa9.38□□□□□ -0.91
LSM8-204ENST00000424702 TEFQ10587 303 aa9.37□□□□□ -0.91
LSM8-204ENST00000424702 RCAN3Q9UKA8 241 aa9.37□□□□□ -0.91
LSM8-204ENST00000424702 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms