RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 CABP1Q9NZU7 370 aa16.91■□□□□ 0.3
DENND3-202ENST00000424248 TRDNQ13061 729 aa16.91■□□□□ 0.3
DENND3-202ENST00000424248 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
DENND3-202ENST00000424248 SASS6Q6UVJ0 657 aa16.91■□□□□ 0.3
DENND3-202ENST00000424248 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
DENND3-202ENST00000424248 RTEL1-TNFRSF6BF6WH68 1400 aa16.91■□□□□ 0.3
DENND3-202ENST00000424248 CLSTN1O94985 981 aa16.9■□□□□ 0.3
DENND3-202ENST00000424248 BCAR3O75815 825 aa16.9■□□□□ 0.3
DENND3-202ENST00000424248 KIF14Q15058 1648 aa16.9■□□□□ 0.3
DENND3-202ENST00000424248 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
DENND3-202ENST00000424248 K7ELQ4 463 aaPredicted RBP16.89■□□□□ 0.3
DENND3-202ENST00000424248 CPLX1O14810 134 aa16.89■□□□□ 0.3
DENND3-202ENST00000424248 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
DENND3-202ENST00000424248 TPM1P09493 284 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
DENND3-202ENST00000424248 BICD2Q8TD16 824 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 TSPY26PQ9H489 355 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 TRIM29Q14134 588 aa16.89■□□□□ 0.29
DENND3-202ENST00000424248 ZNF592Q92610 1267 aa16.88■□□□□ 0.29
DENND3-202ENST00000424248 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
DENND3-202ENST00000424248 FCHSD2O94868 740 aa16.87■□□□□ 0.29
DENND3-202ENST00000424248 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
DENND3-202ENST00000424248 NOL10Q9BSC4 688 aaKnown RBP16.87■□□□□ 0.29
DENND3-202ENST00000424248 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
DENND3-202ENST00000424248 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
DENND3-202ENST00000424248 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
DENND3-202ENST00000424248 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
DENND3-202ENST00000424248 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
DENND3-202ENST00000424248 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
DENND3-202ENST00000424248 MARCH6O60337 910 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
DENND3-202ENST00000424248 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
DENND3-202ENST00000424248 GNAI2P04899 355 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
DENND3-202ENST00000424248 ZSCAN30Q86W11 494 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 APPP05067 770 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 PDCP20941 246 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
DENND3-202ENST00000424248 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
DENND3-202ENST00000424248 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 RNF214Q8ND24 703 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 CCDC66A2RUB6 948 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 PSMA5P28066 241 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 SETQ01105 290 aaPredicted RBP16.84■□□□□ 0.29
DENND3-202ENST00000424248 CCDC70Q6NSX1 233 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 HIP1O00291 1037 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
DENND3-202ENST00000424248 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.29
DENND3-202ENST00000424248 URB2Q14146 1524 aaKnown RBP16.83■□□□□ 0.28
DENND3-202ENST00000424248 NEK4P51957 841 aa16.83■□□□□ 0.28
DENND3-202ENST00000424248 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.28
DENND3-202ENST00000424248 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
DENND3-202ENST00000424248 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
DENND3-202ENST00000424248 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
DENND3-202ENST00000424248 SYTL4Q96C24 671 aaPredicted RBP16.82■□□□□ 0.28
DENND3-202ENST00000424248 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
DENND3-202ENST00000424248 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
DENND3-202ENST00000424248 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
DENND3-202ENST00000424248 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
DENND3-202ENST00000424248 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
DENND3-202ENST00000424248 C11orf95C9JLR9 678 aaPredicted RBP16.81■□□□□ 0.28
DENND3-202ENST00000424248 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
DENND3-202ENST00000424248 RALYLQ86SE5 291 aaKnown RBP16.81■□□□□ 0.28
DENND3-202ENST00000424248 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
DENND3-202ENST00000424248 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
DENND3-202ENST00000424248 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
DENND3-202ENST00000424248 CHD1LQ86WJ1 897 aa16.8■□□□□ 0.28
DENND3-202ENST00000424248 NEUROD6Q96NK8 337 aa16.8■□□□□ 0.28
DENND3-202ENST00000424248 ERICH2A1L162 156 aa16.8■□□□□ 0.28
DENND3-202ENST00000424248 MNS1Q8NEH6 495 aa16.8■□□□□ 0.28
DENND3-202ENST00000424248 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
DENND3-202ENST00000424248 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
DENND3-202ENST00000424248 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
DENND3-202ENST00000424248 ACBD3Q9H3P7 528 aa16.79■□□□□ 0.28
DENND3-202ENST00000424248 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
DENND3-202ENST00000424248 ADGRL1O94910 1474 aa16.79■□□□□ 0.28
DENND3-202ENST00000424248 CREBRFQ8IUR6 639 aa16.79■□□□□ 0.28
DENND3-202ENST00000424248 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
DENND3-202ENST00000424248 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
DENND3-202ENST00000424248 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
DENND3-202ENST00000424248 FSD1Q9BTV5 496 aa16.78■□□□□ 0.28
DENND3-202ENST00000424248 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
DENND3-202ENST00000424248 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
DENND3-202ENST00000424248 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
DENND3-202ENST00000424248 TMPOP42166 694 aaKnown RBP16.77■□□□□ 0.28
DENND3-202ENST00000424248 ANKLE2Q86XL3 938 aa16.77■□□□□ 0.28
DENND3-202ENST00000424248 IPO7O95373 1038 aaKnown RBP16.77■□□□□ 0.28
DENND3-202ENST00000424248 CCP110O43303 1012 aa16.77■□□□□ 0.27
DENND3-202ENST00000424248 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.27
DENND3-202ENST00000424248 SRCIN1Q9C0H9 1055 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms