RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 TRAK1Q9UPV9 953 aa16.28■□□□□ 0.2
TOP2B-203ENST00000424225 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
TOP2B-203ENST00000424225 RRP9O43818 475 aaKnown RBP16.28■□□□□ 0.2
TOP2B-203ENST00000424225 NUCB1Q02818 461 aa16.28■□□□□ 0.2
TOP2B-203ENST00000424225 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
TOP2B-203ENST00000424225 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
TOP2B-203ENST00000424225 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
TOP2B-203ENST00000424225 C1orf115Q9H7X2 142 aa16.27■□□□□ 0.2
TOP2B-203ENST00000424225 FBLN1P23142 703 aa16.27■□□□□ 0.2
TOP2B-203ENST00000424225 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.19
TOP2B-203ENST00000424225 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.19
TOP2B-203ENST00000424225 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
TOP2B-203ENST00000424225 SNX21Q969T3 373 aa16.26■□□□□ 0.19
TOP2B-203ENST00000424225 KIF1BO60333 1816 aa16.26■□□□□ 0.19
TOP2B-203ENST00000424225 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
TOP2B-203ENST00000424225 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
TOP2B-203ENST00000424225 PPLO60437 1756 aa16.25■□□□□ 0.19
TOP2B-203ENST00000424225 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
TOP2B-203ENST00000424225 NSFL1CQ9UNZ2 370 aaKnown RBP16.24■□□□□ 0.19
TOP2B-203ENST00000424225 NEURL4Q96JN8 1562 aa16.24■□□□□ 0.19
TOP2B-203ENST00000424225 PRDM4Q9UKN5 801 aa16.24■□□□□ 0.19
TOP2B-203ENST00000424225 SMC4Q9NTJ3 1288 aa16.23■□□□□ 0.19
TOP2B-203ENST00000424225 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
TOP2B-203ENST00000424225 PPP1R9BQ96SB3 815 aa16.23■□□□□ 0.19
TOP2B-203ENST00000424225 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
TOP2B-203ENST00000424225 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
TOP2B-203ENST00000424225 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
TOP2B-203ENST00000424225 KIAA1211Q6ZU35 1233 aa16.22■□□□□ 0.19
TOP2B-203ENST00000424225 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
TOP2B-203ENST00000424225 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
TOP2B-203ENST00000424225 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
TOP2B-203ENST00000424225 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
TOP2B-203ENST00000424225 ARHGEF28Q8N1W1 1705 aaKnown RBP16.21■□□□□ 0.19
TOP2B-203ENST00000424225 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
TOP2B-203ENST00000424225 NUTM2DQ5VT03 806 aaPredicted RBP16.21■□□□□ 0.19
TOP2B-203ENST00000424225 ADGRB3O60242 1522 aa16.21■□□□□ 0.19
TOP2B-203ENST00000424225 ZDHHC9Q9Y397 364 aa16.21■□□□□ 0.19
TOP2B-203ENST00000424225 MED14O60244 1454 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
TOP2B-203ENST00000424225 TSPYL6Q8N831 410 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 RBSNQ9H1K0 784 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 CAMSAP1Q5T5Y3 1602 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
TOP2B-203ENST00000424225 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
TOP2B-203ENST00000424225 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
TOP2B-203ENST00000424225 NEO1Q92859 1461 aa16.19■□□□□ 0.18
TOP2B-203ENST00000424225 ZBTB7BO15156 539 aaPredicted RBP16.19■□□□□ 0.18
TOP2B-203ENST00000424225 AAMPQ13685 434 aa16.19■□□□□ 0.18
TOP2B-203ENST00000424225 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 CABP2Q9NPB3 220 aa16.18■□□□□ 0.18
TOP2B-203ENST00000424225 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
TOP2B-203ENST00000424225 BAG4O95429 457 aaKnown RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
TOP2B-203ENST00000424225 GPT2Q8TD30 523 aa16.18■□□□□ 0.18
TOP2B-203ENST00000424225 ATP7AQ04656 1500 aa16.17■□□□□ 0.18
TOP2B-203ENST00000424225 KIF3BO15066 747 aa16.17■□□□□ 0.18
TOP2B-203ENST00000424225 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
TOP2B-203ENST00000424225 CLEC17AQ6ZS10 378 aa16.17■□□□□ 0.18
TOP2B-203ENST00000424225 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
TOP2B-203ENST00000424225 ADGRL1O94910 1474 aa16.16■□□□□ 0.18
TOP2B-203ENST00000424225 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
TOP2B-203ENST00000424225 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
TOP2B-203ENST00000424225 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
TOP2B-203ENST00000424225 A0A1W2PP64 1363 aa16.15■□□□□ 0.18
TOP2B-203ENST00000424225 OFD1O75665 1012 aa16.14■□□□□ 0.17
TOP2B-203ENST00000424225 BMP2KLQ5H9B9 411 aa16.14■□□□□ 0.17
TOP2B-203ENST00000424225 C14orf93Q9H972 538 aaKnown RBP16.14■□□□□ 0.17
TOP2B-203ENST00000424225 DDX19BQ9UMR2 479 aa16.14■□□□□ 0.17
TOP2B-203ENST00000424225 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
TOP2B-203ENST00000424225 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
TOP2B-203ENST00000424225 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
TOP2B-203ENST00000424225 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
TOP2B-203ENST00000424225 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
TOP2B-203ENST00000424225 NASPP49321 788 aaPredicted RBP16.13■□□□□ 0.17
TOP2B-203ENST00000424225 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
TOP2B-203ENST00000424225 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
TOP2B-203ENST00000424225 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
TOP2B-203ENST00000424225 ZSCAN23Q3MJ62 389 aa16.12■□□□□ 0.17
TOP2B-203ENST00000424225 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
TOP2B-203ENST00000424225 PDLIM2Q96JY6 352 aa16.12■□□□□ 0.17
TOP2B-203ENST00000424225 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
TOP2B-203ENST00000424225 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
TOP2B-203ENST00000424225 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
TOP2B-203ENST00000424225 ZSCAN30Q86W11 494 aa16.1■□□□□ 0.17
TOP2B-203ENST00000424225 ANKRD36BQ8N2N9 1353 aa16.1■□□□□ 0.17
TOP2B-203ENST00000424225 FYB1O15117 783 aa16.1■□□□□ 0.17
TOP2B-203ENST00000424225 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
TOP2B-203ENST00000424225 NPATQ14207 1427 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 CAVIN1Q6NZI2 390 aaKnown RBP16.09■□□□□ 0.17
TOP2B-203ENST00000424225 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
TOP2B-203ENST00000424225 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms