RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 PMFBP1Q8TBY8 1022 aa12.31□□□□□ -0.44
LINC01399-201ENST00000423311 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
LINC01399-201ENST00000423311 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
LINC01399-201ENST00000423311 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
LINC01399-201ENST00000423311 SCAF1Q9H7N4 1312 aaKnown RBP12.3□□□□□ -0.44
LINC01399-201ENST00000423311 PPP2R1AP30153 589 aa12.29□□□□□ -0.44
LINC01399-201ENST00000423311 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
LINC01399-201ENST00000423311 MRS2Q9HD23 443 aa12.29□□□□□ -0.44
LINC01399-201ENST00000423311 MAP2P11137 1827 aaKnown RBP12.29□□□□□ -0.44
LINC01399-201ENST00000423311 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
LINC01399-201ENST00000423311 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
LINC01399-201ENST00000423311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.443e-6■■■□□ 16.5
LINC01399-201ENST00000423311 ORAI2Q96SN7 254 aa12.27□□□□□ -0.45
LINC01399-201ENST00000423311 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
LINC01399-201ENST00000423311 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
LINC01399-201ENST00000423311 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
LINC01399-201ENST00000423311 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
LINC01399-201ENST00000423311 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
LINC01399-201ENST00000423311 PSME1Q06323 249 aa12.26□□□□□ -0.45
LINC01399-201ENST00000423311 COG3Q96JB2 828 aa12.26□□□□□ -0.45
LINC01399-201ENST00000423311 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
LINC01399-201ENST00000423311 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
LINC01399-201ENST00000423311 CCDC184Q52MB2 194 aa12.25□□□□□ -0.45
LINC01399-201ENST00000423311 NME9Q86XW9 330 aa12.25□□□□□ -0.45
LINC01399-201ENST00000423311 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
LINC01399-201ENST00000423311 IQSEC2Q5JU85 1478 aa12.24□□□□□ -0.45
LINC01399-201ENST00000423311 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
LINC01399-201ENST00000423311 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
LINC01399-201ENST00000423311 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
LINC01399-201ENST00000423311 INSRP06213 1382 aa12.23□□□□□ -0.45
LINC01399-201ENST00000423311 FOXO3O43524 673 aa12.23□□□□□ -0.45
LINC01399-201ENST00000423311 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
LINC01399-201ENST00000423311 SBNO1A3KN83 1393 aa12.22□□□□□ -0.45
LINC01399-201ENST00000423311 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
LINC01399-201ENST00000423311 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
LINC01399-201ENST00000423311 PXDNQ92626 1479 aa12.21□□□□□ -0.45
LINC01399-201ENST00000423311 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.45
LINC01399-201ENST00000423311 MTHFSP49914 203 aa12.21□□□□□ -0.45
LINC01399-201ENST00000423311 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
LINC01399-201ENST00000423311 CFAP53Q96M91 514 aa12.21□□□□□ -0.45
LINC01399-201ENST00000423311 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
LINC01399-201ENST00000423311 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
LINC01399-201ENST00000423311 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LINC01399-201ENST00000423311 NLRP6P59044 892 aa12.2□□□□□ -0.46
LINC01399-201ENST00000423311 CDK12Q9NYV4 1490 aaPredicted RBP12.2□□□□□ -0.46
LINC01399-201ENST00000423311 ROBO1Q9Y6N7 1651 aa12.19□□□□□ -0.46
LINC01399-201ENST00000423311 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
LINC01399-201ENST00000423311 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
LINC01399-201ENST00000423311 ZRANB1Q9UGI0 708 aa12.19□□□□□ -0.46
LINC01399-201ENST00000423311 SLIT3O75094 1523 aa12.19□□□□□ -0.46
LINC01399-201ENST00000423311 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
LINC01399-201ENST00000423311 LTN1O94822 1766 aa12.18□□□□□ -0.46
LINC01399-201ENST00000423311 POLKQ9UBT6 870 aa12.18□□□□□ -0.46
LINC01399-201ENST00000423311 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
LINC01399-201ENST00000423311 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
LINC01399-201ENST00000423311 AHDC1Q5TGY3 1603 aaPredicted RBP12.18□□□□□ -0.46
LINC01399-201ENST00000423311 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
LINC01399-201ENST00000423311 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
LINC01399-201ENST00000423311 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
LINC01399-201ENST00000423311 SOS2Q07890 1332 aaPredicted RBP12.17□□□□□ -0.46
LINC01399-201ENST00000423311 KCNH5Q8NCM2 988 aa12.17□□□□□ -0.46
LINC01399-201ENST00000423311 NFAT5O94916 1531 aa12.16□□□□□ -0.46
LINC01399-201ENST00000423311 USP19O94966 1318 aa12.16□□□□□ -0.46
LINC01399-201ENST00000423311 SPATA31A3Q5VYP0 1347 aa12.16□□□□□ -0.46
LINC01399-201ENST00000423311 TOM1O60784 492 aa12.16□□□□□ -0.46
LINC01399-201ENST00000423311 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01399-201ENST00000423311 PEAK1Q9H792 1746 aa12.15□□□□□ -0.46
LINC01399-201ENST00000423311 XPCQ01831 940 aaPredicted RBP12.15□□□□□ -0.46
LINC01399-201ENST00000423311 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
LINC01399-201ENST00000423311 BLMP54132 1417 aaPredicted RBP12.14□□□□□ -0.47
LINC01399-201ENST00000423311 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
LINC01399-201ENST00000423311 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
LINC01399-201ENST00000423311 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
LINC01399-201ENST00000423311 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
LINC01399-201ENST00000423311 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
LINC01399-201ENST00000423311 FLT4P35916 1363 aa12.13□□□□□ -0.47
LINC01399-201ENST00000423311 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 ABCC6O95255 1503 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 GCP02774 474 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 FBLN1P23142 703 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
LINC01399-201ENST00000423311 NUTM2GQ5VZR2 741 aa12.12□□□□□ -0.47
LINC01399-201ENST00000423311 DDX17Q92841 729 aaKnown RBP12.12□□□□□ -0.47
LINC01399-201ENST00000423311 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
LINC01399-201ENST00000423311 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
LINC01399-201ENST00000423311 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
LINC01399-201ENST00000423311 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
LINC01399-201ENST00000423311 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
LINC01399-201ENST00000423311 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
LINC01399-201ENST00000423311 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01399-201ENST00000423311 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
LINC01399-201ENST00000423311 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
LINC01399-201ENST00000423311 LRRC59Q96AG4 307 aaKnown RBP12.1□□□□□ -0.47
LINC01399-201ENST00000423311 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
LINC01399-201ENST00000423311 COL16A1Q07092 1604 aaPredicted RBP12.09□□□□□ -0.47
LINC01399-201ENST00000423311 IL13P35225 146 aa12.09□□□□□ -0.47
LINC01399-201ENST00000423311 AMPHP49418 695 aa12.09□□□□□ -0.47
LINC01399-201ENST00000423311 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
LINC01399-201ENST00000423311 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms