RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 ALS2Q96Q42 1657 aa30.19■■■□□ 2.42
FNDC3B-204ENST00000421757 ATAD2Q6PL18 1390 aa30.18■■■□□ 2.42
FNDC3B-204ENST00000421757 FNBP4Q8N3X1 1017 aaPredicted RBP30.18■■■□□ 2.42
FNDC3B-204ENST00000421757 RXRBP28702 533 aa30.17■■■□□ 2.42
FNDC3B-204ENST00000421757 MARF1Q9Y4F3 1742 aaKnown RBP30.16■■■□□ 2.42
FNDC3B-204ENST00000421757 USP47Q96K76 1375 aa30.15■■■□□ 2.42
FNDC3B-204ENST00000421757 NUTM2GQ5VZR2 741 aa30.15■■■□□ 2.42
FNDC3B-204ENST00000421757 ABTB2Q8N961 1025 aa30.14■■■□□ 2.42
FNDC3B-204ENST00000421757 SLC24A1O60721 1099 aa30.12■■■□□ 2.41
FNDC3B-204ENST00000421757 ABCA3Q99758 1704 aa30.11■■■□□ 2.41
FNDC3B-204ENST00000421757 TMC1Q8TDI8 760 aa30.11■■■□□ 2.41
FNDC3B-204ENST00000421757 TESK2Q96S53 571 aa30.11■■■□□ 2.41
FNDC3B-204ENST00000421757 TRPC5Q9UL62 973 aaPredicted RBP30.11■■■□□ 2.41
FNDC3B-204ENST00000421757 ZNF692Q9BU19 519 aaPredicted RBP30.1■■■□□ 2.41
FNDC3B-204ENST00000421757 USP6P35125 1406 aa30.1■■■□□ 2.41
FNDC3B-204ENST00000421757 BRD4O60885 1362 aaPredicted RBP30.09■■■□□ 2.41
FNDC3B-204ENST00000421757 RBM6P78332 1123 aaKnown RBP30.08■■■□□ 2.41
FNDC3B-204ENST00000421757 BCL9LQ86UU0 1499 aa30.06■■■□□ 2.4
FNDC3B-204ENST00000421757 FAM83GA6ND36 823 aa30.05■■■□□ 2.4
FNDC3B-204ENST00000421757 NLRP13Q86W25 1043 aa30.05■■■□□ 2.4
FNDC3B-204ENST00000421757 UNC5CLQ8IV45 518 aa30.05■■■□□ 2.4
FNDC3B-204ENST00000421757 SLIT2O94813 1529 aa30.05■■■□□ 2.4
FNDC3B-204ENST00000421757 TMF1P82094 1093 aa30.04■■■□□ 2.4
FNDC3B-204ENST00000421757 PUS7Q96PZ0 661 aaKnown RBP30.04■■■□□ 2.4
FNDC3B-204ENST00000421757 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
FNDC3B-204ENST00000421757 ATRNO75882 1429 aa30.03■■■□□ 2.4
FNDC3B-204ENST00000421757 SLC12A5Q9H2X9 1139 aa30.02■■■□□ 2.4
FNDC3B-204ENST00000421757 PRDM11Q9NQV5 511 aa30.02■■■□□ 2.4
FNDC3B-204ENST00000421757 NLRP6P59044 892 aa30.01■■■□□ 2.39
FNDC3B-204ENST00000421757 HDGFL2Q7Z4V5 671 aaPredicted RBP30.01■■■□□ 2.39
FNDC3B-204ENST00000421757 CPSF1Q10570 1443 aaKnown RBP30.01■■■□□ 2.39
FNDC3B-204ENST00000421757 CRYBG1Q9Y4K1 1723 aa30.01■■■□□ 2.39
FNDC3B-204ENST00000421757 ZC3H6P61129 1189 aaKnown RBP30■■■□□ 2.39
FNDC3B-204ENST00000421757 TTC21BQ7Z4L5 1316 aa29.99■■■□□ 2.39
FNDC3B-204ENST00000421757 SSH2Q76I76 1423 aa29.99■■■□□ 2.39
FNDC3B-204ENST00000421757 AKAP12Q02952 1782 aa29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 PHRF1Q9P1Y6 1649 aaKnown RBP29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 BTG4Q9NY30 223 aa29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 TERF2IPQ9NYB0 399 aa29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 CDK12Q9NYV4 1490 aaPredicted RBP29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
FNDC3B-204ENST00000421757 GJD4Q96KN9 370 aaPredicted RBP29.97■■■□□ 2.39
FNDC3B-204ENST00000421757 CCDC9Q9Y3X0 531 aaKnown RBP29.97■■■□□ 2.39
FNDC3B-204ENST00000421757 KIAA0232Q92628 1395 aa29.97■■■□□ 2.39
FNDC3B-204ENST00000421757 USP19O94966 1318 aa29.96■■■□□ 2.39
FNDC3B-204ENST00000421757 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.96■■■□□ 2.39
FNDC3B-204ENST00000421757 TTC21AQ8NDW8 1320 aa29.96■■■□□ 2.39
FNDC3B-204ENST00000421757 GCP02774 474 aa29.95■■■□□ 2.39
FNDC3B-204ENST00000421757 CHRNA2Q15822 529 aa29.95■■■□□ 2.39
FNDC3B-204ENST00000421757 COL14A1Q05707 1796 aaKnown RBP29.95■■■□□ 2.38
FNDC3B-204ENST00000421757 NWD2Q9ULI1 1742 aa29.94■■■□□ 2.38
FNDC3B-204ENST00000421757 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
FNDC3B-204ENST00000421757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.94■■■□□ 2.381e-7■■□□□ 11.9
FNDC3B-204ENST00000421757 RGS12O14924 1447 aa29.94■■■□□ 2.38
FNDC3B-204ENST00000421757 CD163L1Q9NR16 1453 aa29.93■■■□□ 2.38
FNDC3B-204ENST00000421757 NINLQ9Y2I6 1382 aa29.93■■■□□ 2.38
FNDC3B-204ENST00000421757 EIF4G2P78344 907 aaKnown RBP eCLIP29.92■■■□□ 2.381e-10■■■■■ 31.5
FNDC3B-204ENST00000421757 VPS72Q15906 364 aa29.92■■■□□ 2.38
FNDC3B-204ENST00000421757 PIK3C2AO00443 1686 aa29.91■■■□□ 2.38
FNDC3B-204ENST00000421757 NRKQ7Z2Y5 1582 aa29.91■■■□□ 2.38
FNDC3B-204ENST00000421757 MON2Q7Z3U7 1717 aa29.91■■■□□ 2.38
FNDC3B-204ENST00000421757 A0A1W2PP64 1363 aa29.9■■■□□ 2.38
FNDC3B-204ENST00000421757 ZBTB7CA1YPR0 619 aa29.89■■■□□ 2.38
FNDC3B-204ENST00000421757 EDC4Q6P2E9 1401 aaKnown RBP29.87■■■□□ 2.37
FNDC3B-204ENST00000421757 SOX12O15370 315 aa29.86■■■□□ 2.37
FNDC3B-204ENST00000421757 HSPA5P11021 654 aaKnown RBP29.86■■■□□ 2.37
FNDC3B-204ENST00000421757 CPDO75976 1380 aa29.86■■■□□ 2.37
FNDC3B-204ENST00000421757 NME9Q86XW9 330 aa29.85■■■□□ 2.37
FNDC3B-204ENST00000421757 STRN4Q9NRL3 753 aa29.85■■■□□ 2.37
FNDC3B-204ENST00000421757 KCNH5Q8NCM2 988 aa29.84■■■□□ 2.37
FNDC3B-204ENST00000421757 SLIT3O75094 1523 aa29.84■■■□□ 2.37
FNDC3B-204ENST00000421757 GLI3P10071 1580 aa29.84■■■□□ 2.37
FNDC3B-204ENST00000421757 NRAPQ86VF7 1730 aa29.84■■■□□ 2.37
FNDC3B-204ENST00000421757 EVA1CP58658 441 aa29.83■■■□□ 2.37
FNDC3B-204ENST00000421757 ZRANB1Q9UGI0 708 aa29.83■■■□□ 2.37
FNDC3B-204ENST00000421757 ANKRD36BQ8N2N9 1353 aa29.81■■■□□ 2.36
FNDC3B-204ENST00000421757 POLR3GLQ9BT43 218 aa29.81■■■□□ 2.36
FNDC3B-204ENST00000421757 A0A0G2JS52 829 aa29.79■■■□□ 2.36
FNDC3B-204ENST00000421757 MYT1Q01538 1121 aa29.79■■■□□ 2.36
FNDC3B-204ENST00000421757 USP31Q70CQ4 1352 aa29.78■■■□□ 2.36
FNDC3B-204ENST00000421757 SPATA31A5Q5VU36 1347 aa29.76■■■□□ 2.36
FNDC3B-204ENST00000421757 SPATA31A7Q8IWB4 1347 aa29.76■■■□□ 2.36
FNDC3B-204ENST00000421757 FAM98CQ17RN3 349 aaKnown RBP29.76■■■□□ 2.35
FNDC3B-204ENST00000421757 SEPT12Q8IYM1 358 aa29.76■■■□□ 2.35
FNDC3B-204ENST00000421757 CAMTA1Q9Y6Y1 1673 aa29.76■■■□□ 2.35
FNDC3B-204ENST00000421757 ARHGEF25Q86VW2 580 aa29.74■■■□□ 2.35
FNDC3B-204ENST00000421757 AATKQ6ZMQ8 1374 aa29.74■■■□□ 2.35
FNDC3B-204ENST00000421757 LMO7Q8WWI1 1683 aa29.73■■■□□ 2.35
FNDC3B-204ENST00000421757 USP35Q9P2H5 1018 aa29.73■■■□□ 2.35
FNDC3B-204ENST00000421757 ONECUT3O60422 494 aaPredicted RBP29.72■■■□□ 2.35
FNDC3B-204ENST00000421757 LARP1Q6PKG0 1096 aaKnown RBP29.72■■■□□ 2.35
FNDC3B-204ENST00000421757 UPF1Q92900 1129 aaKnown RBP eCLIP29.72■■■□□ 2.35
FNDC3B-204ENST00000421757 COG3Q96JB2 828 aa29.71■■■□□ 2.35
FNDC3B-204ENST00000421757 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
FNDC3B-204ENST00000421757 NFAT5O94916 1531 aa29.69■■■□□ 2.34
FNDC3B-204ENST00000421757 COL5A2P05997 1499 aaPredicted RBP29.68■■■□□ 2.34
FNDC3B-204ENST00000421757 USP54Q70EL1 1684 aa29.68■■■□□ 2.34
FNDC3B-204ENST00000421757 OVOS2A0A0J9YW53 1432 aa29.68■■■□□ 2.34
FNDC3B-204ENST00000421757 OVOS2Q6IE36 1432 aa29.68■■■□□ 2.34
FNDC3B-204ENST00000421757 MYOM1P52179 1685 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms