RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
DDX55-203ENST00000421670 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.05
DDX55-203ENST00000421670 SSH2Q76I76 1423 aa21.64■■□□□ 1.05
DDX55-203ENST00000421670 KRT28Q7Z3Y7 464 aa21.63■■□□□ 1.05
DDX55-203ENST00000421670 ANKRD26Q9UPS8 1709 aa21.62■■□□□ 1.05
DDX55-203ENST00000421670 MARF1Q9Y4F3 1742 aaKnown RBP21.62■■□□□ 1.05
DDX55-203ENST00000421670 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
DDX55-203ENST00000421670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
DDX55-203ENST00000421670 PAK3O75914 559 aaPredicted RBP21.6■■□□□ 1.05
DDX55-203ENST00000421670 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
DDX55-203ENST00000421670 TNS3Q68CZ2 1445 aa21.59■■□□□ 1.05
DDX55-203ENST00000421670 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
DDX55-203ENST00000421670 PER1O15534 1290 aaPredicted RBP21.57■■□□□ 1.04
DDX55-203ENST00000421670 SBNO1A3KN83 1393 aa21.57■■□□□ 1.04
DDX55-203ENST00000421670 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
DDX55-203ENST00000421670 CRYBG1Q9Y4K1 1723 aa21.57■■□□□ 1.04
DDX55-203ENST00000421670 ABCA3Q99758 1704 aa21.56■■□□□ 1.04
DDX55-203ENST00000421670 KNSTRNQ9Y448 316 aa21.56■■□□□ 1.04
DDX55-203ENST00000421670 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
DDX55-203ENST00000421670 NME9Q86XW9 330 aa21.55■■□□□ 1.04
DDX55-203ENST00000421670 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
DDX55-203ENST00000421670 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
DDX55-203ENST00000421670 LMOD2Q6P5Q4 547 aa21.54■■□□□ 1.04
DDX55-203ENST00000421670 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
DDX55-203ENST00000421670 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
DDX55-203ENST00000421670 COL22A1Q8NFW1 1626 aaPredicted RBP21.53■■□□□ 1.04
DDX55-203ENST00000421670 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
DDX55-203ENST00000421670 NUTM2GQ5VZR2 741 aa21.53■■□□□ 1.04
DDX55-203ENST00000421670 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
DDX55-203ENST00000421670 ZRANB1Q9UGI0 708 aa21.53■■□□□ 1.04
DDX55-203ENST00000421670 AMER1Q5JTC6 1135 aaPredicted RBP21.52■■□□□ 1.04
DDX55-203ENST00000421670 MED1Q15648 1581 aaPredicted RBP21.51■■□□□ 1.03
DDX55-203ENST00000421670 OVOS2A0A0J9YW53 1432 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 OVOS2Q6IE36 1432 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 FYB1O15117 783 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 HSPA1LP34931 641 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 FBXO41Q8TF61 875 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
DDX55-203ENST00000421670 ARHGEF10O15013 1369 aa21.5■■□□□ 1.03
DDX55-203ENST00000421670 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
DDX55-203ENST00000421670 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
DDX55-203ENST00000421670 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
DDX55-203ENST00000421670 NSD2O96028 1365 aa21.48■■□□□ 1.03
DDX55-203ENST00000421670 NLRP6P59044 892 aa21.48■■□□□ 1.03
DDX55-203ENST00000421670 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
DDX55-203ENST00000421670 SLIT3O75094 1523 aa21.47■■□□□ 1.03
DDX55-203ENST00000421670 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
DDX55-203ENST00000421670 LTN1O94822 1766 aa21.46■■□□□ 1.03
DDX55-203ENST00000421670 NPC1L1Q9UHC9 1359 aa21.46■■□□□ 1.03
DDX55-203ENST00000421670 MAP2P11137 1827 aaKnown RBP21.45■■□□□ 1.02
DDX55-203ENST00000421670 COG3Q96JB2 828 aa21.44■■□□□ 1.02
DDX55-203ENST00000421670 NLRP13Q86W25 1043 aa21.44■■□□□ 1.02
DDX55-203ENST00000421670 CABLES1Q8TDN4 633 aa21.44■■□□□ 1.02
DDX55-203ENST00000421670 NFAT5O94916 1531 aa21.43■■□□□ 1.02
DDX55-203ENST00000421670 USP19O94966 1318 aa21.43■■□□□ 1.02
DDX55-203ENST00000421670 JCADQ9P266 1359 aa21.42■■□□□ 1.02
DDX55-203ENST00000421670 SOX12O15370 315 aa21.42■■□□□ 1.02
DDX55-203ENST00000421670 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
DDX55-203ENST00000421670 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
DDX55-203ENST00000421670 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
DDX55-203ENST00000421670 PARD3Q8TEW0 1356 aa21.39■■□□□ 1.02
DDX55-203ENST00000421670 FBLN1P23142 703 aa21.38■■□□□ 1.01
DDX55-203ENST00000421670 PEAK1Q9H792 1746 aa21.37■■□□□ 1.01
DDX55-203ENST00000421670 RGPD5Q99666 1765 aa21.36■■□□□ 1.01
DDX55-203ENST00000421670 GCP02774 474 aa21.36■■□□□ 1.01
DDX55-203ENST00000421670 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
DDX55-203ENST00000421670 PRKRIP1Q9H875 184 aaPredicted RBP21.35■■□□□ 1.01
DDX55-203ENST00000421670 LRP6O75581 1613 aa21.34■■□□□ 1.01
DDX55-203ENST00000421670 NUTM2BA6NNL0 878 aaPredicted RBP21.33■■□□□ 1.01
DDX55-203ENST00000421670 NUTM2EB1AL46 878 aaPredicted RBP21.33■■□□□ 1.01
DDX55-203ENST00000421670 NUTM2AQ8IVF1 878 aaPredicted RBP21.33■■□□□ 1.01
DDX55-203ENST00000421670 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
DDX55-203ENST00000421670 ANP32CO43423 234 aa21.32■■□□□ 1
DDX55-203ENST00000421670 ZC3H6P61129 1189 aaKnown RBP21.32■■□□□ 1
DDX55-203ENST00000421670 RRS1Q15050 365 aaKnown RBP21.32■■□□□ 1
DDX55-203ENST00000421670 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
DDX55-203ENST00000421670 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
DDX55-203ENST00000421670 COL18A1P39060 1754 aa21.32■■□□□ 1
DDX55-203ENST00000421670 KIAA0232Q92628 1395 aa21.31■■□□□ 1
DDX55-203ENST00000421670 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
DDX55-203ENST00000421670 RALBP1Q15311 655 aa21.31■■□□□ 1
DDX55-203ENST00000421670 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
DDX55-203ENST00000421670 COL14A1Q05707 1796 aaKnown RBP21.3■■□□□ 1
DDX55-203ENST00000421670 LMO7Q8WWI1 1683 aa21.3■■□□□ 1
DDX55-203ENST00000421670 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
DDX55-203ENST00000421670 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
DDX55-203ENST00000421670 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
DDX55-203ENST00000421670 ADAMTS2O95450 1211 aa21.28■■□□□ 1
DDX55-203ENST00000421670 PPP2R1AP30153 589 aa21.28■■□□□ 1
DDX55-203ENST00000421670 CPDO75976 1380 aa21.28■■□□□ 1
DDX55-203ENST00000421670 POLKQ9UBT6 870 aa21.27■■□□□ 1
DDX55-203ENST00000421670 ARHGEF25Q86VW2 580 aa21.27■□□□□ 0.99
DDX55-203ENST00000421670 MYBBP1AQ9BQG0 1328 aaKnown RBP21.27■□□□□ 0.99
DDX55-203ENST00000421670 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
DDX55-203ENST00000421670 PPM1GO15355 546 aaPredicted RBP21.26■□□□□ 0.99
DDX55-203ENST00000421670 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
DDX55-203ENST00000421670 ILDR1Q86SU0 546 aaPredicted RBP21.26■□□□□ 0.99
DDX55-203ENST00000421670 ABCC6O95255 1503 aa21.25■□□□□ 0.99
DDX55-203ENST00000421670 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
DDX55-203ENST00000421670 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms