RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-205	ENST00000420665	HAP1	P54257	671 aa	Predicted RBP	33.88	■■■■□ 3.01
LRRFIP1-205	ENST00000420665	ZNF772	Q68DY9	489 aa	Predicted RBP	33.88	■■■■□ 3.01
LRRFIP1-205	ENST00000420665	NGLY1	Q96IV0	654 aa		33.87	■■■■□ 3.01
LRRFIP1-205	ENST00000420665	USP6	P35125	1406 aa		33.86	■■■■□ 3.01
LRRFIP1-205	ENST00000420665	CRYBG1	Q9Y4K1	1723 aa		33.84	■■■■□ 3.01
LRRFIP1-205	ENST00000420665	AKAP12	Q02952	1782 aa		33.81	■■■■□ 3
LRRFIP1-205	ENST00000420665	SLC24A1	O60721	1099 aa		33.81	■■■■□ 3
LRRFIP1-205	ENST00000420665	BRD4	O60885	1362 aa	Predicted RBP	33.81	■■■■□ 3
LRRFIP1-205	ENST00000420665	PUS7	Q96PZ0	661 aa	Known RBP	33.78	■■■■□ 3
LRRFIP1-205	ENST00000420665	CPSF1	Q10570	1443 aa	Known RBP	33.78	■■■■□ 3
LRRFIP1-205	ENST00000420665	NUTM2G	Q5VZR2	741 aa		33.77	■■■■□ 3
LRRFIP1-205	ENST00000420665	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.77	■■■■□ 3
LRRFIP1-205	ENST00000420665	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.77	■■■■□ 3
LRRFIP1-205	ENST00000420665	ABTB2	Q8N961	1025 aa		33.76	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	SSH2	Q76I76	1423 aa		33.76	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	TMF1	P82094	1093 aa		33.75	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	TMC1	Q8TDI8	760 aa		33.75	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	USP21	Q9UK80	565 aa		33.75	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	NRK	Q7Z2Y5	1582 aa		33.75	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	ZNF692	Q9BU19	519 aa	Predicted RBP	33.74	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	CD163L1	Q9NR16	1453 aa		33.74	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	MON2	Q7Z3U7	1717 aa		33.73	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	KTN1	Q86UP2	1357 aa	Known RBP	33.72	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	SLIT2	O94813	1529 aa		33.72	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	PLCH1	Q4KWH8	1693 aa		33.71	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	BCL9L	Q86UU0	1499 aa		33.71	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	SLC12A5	Q9H2X9	1139 aa		33.71	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	PIK3C2A	O00443	1686 aa		33.71	■■■□□ 2.99
LRRFIP1-205	ENST00000420665	NINL	Q9Y2I6	1382 aa		33.7	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	QTRT2	Q9H974	415 aa	Known RBP	33.69	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.68	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	USP19	O94966	1318 aa		33.68	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	TTC21B	Q7Z4L5	1316 aa		33.67	■■■□□ 2.98
LRRFIP1-205	ENST00000420665		A0A1W2PP64	1363 aa		33.66	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	ATRN	O75882	1429 aa		33.66	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	RXRB	P28702	533 aa		33.66	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.66	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	NLRP13	Q86W25	1043 aa		33.66	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	COL14A1	Q05707	1796 aa	Known RBP	33.65	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	NWD2	Q9ULI1	1742 aa		33.65	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.65	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	TRPC5	Q9UL62	973 aa	Predicted RBP	33.65	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	TTC21A	Q8NDW8	1320 aa		33.64	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	FAM83G	A6ND36	823 aa		33.64	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	TERF2IP	Q9NYB0	399 aa		33.64	■■■□□ 2.98
LRRFIP1-205	ENST00000420665	SOCS7	O14512	581 aa		33.63	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	CDCA8	Q53HL2	280 aa		33.63	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	HSPA5	P11021	654 aa	Known RBP	33.62	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	NLRP6	P59044	892 aa		33.62	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	UNC5CL	Q8IV45	518 aa		33.62	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	KIAA0232	Q92628	1395 aa		33.61	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	PRDM11	Q9NQV5	511 aa		33.61	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	SLIT3	O75094	1523 aa		33.6	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	RBM6	P78332	1123 aa	Known RBP	33.6	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	EDC4	Q6P2E9	1401 aa	Known RBP	33.6	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.59	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	ZC3H6	P61129	1189 aa	Known RBP	33.58	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	NRAP	Q86VF7	1730 aa		33.58	■■■□□ 2.97
LRRFIP1-205	ENST00000420665	GC	P02774	474 aa		33.56	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	MYOM1	P52179	1685 aa		33.55	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	BTG4	Q9NY30	223 aa		33.55	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	ANKRD36B	Q8N2N9	1353 aa		33.55	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	RGS12	O14924	1447 aa		33.54	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	CHRNA2	Q15822	529 aa		33.54	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	CPD	O75976	1380 aa		33.54	■■■□□ 2.96
LRRFIP1-205	ENST00000420665	NME9	Q86XW9	330 aa		33.51	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	GJD4	Q96KN9	370 aa	Predicted RBP	33.51	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	USP54	Q70EL1	1684 aa		33.51	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	GLI3	P10071	1580 aa		33.5	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	VPS72	Q15906	364 aa		33.49	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	USP31	Q70CQ4	1352 aa		33.48	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	ZRANB1	Q9UGI0	708 aa		33.48	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	LMO7	Q8WWI1	1683 aa		33.48	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	CCDC9	Q9Y3X0	531 aa	Known RBP	33.46	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	NFAT5	O94916	1531 aa		33.45	■■■□□ 2.95
LRRFIP1-205	ENST00000420665	SOX12	O15370	315 aa		33.44	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	KCNH5	Q8NCM2	988 aa		33.44	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	POLR3GL	Q9BT43	218 aa		33.44	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	ZBTB7C	A1YPR0	619 aa		33.43	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	OVOS2	A0A0J9YW53	1432 aa		33.43	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	OVOS2	Q6IE36	1432 aa		33.43	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	CAMTA1	Q9Y6Y1	1673 aa		33.42	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	STRN4	Q9NRL3	753 aa		33.39	■■■□□ 2.94
LRRFIP1-205	ENST00000420665	AATK	Q6ZMQ8	1374 aa		33.38	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	ARHGEF25	Q86VW2	580 aa		33.36	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	COL5A2	P05997	1499 aa	Predicted RBP	33.36	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	SPATA31A5	Q5VU36	1347 aa		33.35	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	SPATA31A7	Q8IWB4	1347 aa		33.35	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	COL18A1	P39060	1754 aa		33.35	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	NSD3	Q9BZ95	1437 aa		33.35	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	C11orf95	C9JLR9	678 aa	Predicted RBP	33.34	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	EVA1C	P58658	441 aa		33.33	■■■□□ 2.93
LRRFIP1-205	ENST00000420665	COG3	Q96JB2	828 aa		33.32	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	CARD14	Q9BXL6	1004 aa		33.32	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	KIF20B	Q96Q89	1820 aa		33.32	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	ABCC6	O95255	1503 aa		33.3	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	SPATA31A1	Q5TZJ5	1347 aa		33.29	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	FYB1	O15117	783 aa		33.29	■■■□□ 2.92
LRRFIP1-205	ENST00000420665	LTN1	O94822	1766 aa		33.29	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms