RNA–Protein interactions for RNA: ENST00000419253.1

TTC28-AS1-203, TTC28 antisense RNA 1, humanhuman

TSL 1 (best)

Gene TTC28-AS1, Length 846 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-AS1-203ENST00000419253 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
TTC28-AS1-203ENST00000419253 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
TTC28-AS1-203ENST00000419253 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
TTC28-AS1-203ENST00000419253 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
TTC28-AS1-203ENST00000419253 SBNO2Q9Y2G9 1366 aa17.49■□□□□ 0.39
TTC28-AS1-203ENST00000419253 RBM6P78332 1123 aaKnown RBP17.48■□□□□ 0.39
TTC28-AS1-203ENST00000419253 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
TTC28-AS1-203ENST00000419253 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
TTC28-AS1-203ENST00000419253 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
TTC28-AS1-203ENST00000419253 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
TTC28-AS1-203ENST00000419253 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
TTC28-AS1-203ENST00000419253 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
TTC28-AS1-203ENST00000419253 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
TTC28-AS1-203ENST00000419253 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
TTC28-AS1-203ENST00000419253 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
TTC28-AS1-203ENST00000419253 USP47Q96K76 1375 aa17.42■□□□□ 0.38
TTC28-AS1-203ENST00000419253 ABCA3Q99758 1704 aa17.42■□□□□ 0.38
TTC28-AS1-203ENST00000419253 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
TTC28-AS1-203ENST00000419253 USP6P35125 1406 aa17.41■□□□□ 0.38
TTC28-AS1-203ENST00000419253 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
TTC28-AS1-203ENST00000419253 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
TTC28-AS1-203ENST00000419253 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
TTC28-AS1-203ENST00000419253 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
TTC28-AS1-203ENST00000419253 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
TTC28-AS1-203ENST00000419253 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
TTC28-AS1-203ENST00000419253 NLRP6P59044 892 aa17.4■□□□□ 0.38
TTC28-AS1-203ENST00000419253 TMF1P82094 1093 aa17.4■□□□□ 0.38
TTC28-AS1-203ENST00000419253 KTN1Q86UP2 1357 aaKnown RBP17.4■□□□□ 0.38
TTC28-AS1-203ENST00000419253 ATRNO75882 1429 aa17.39■□□□□ 0.38
TTC28-AS1-203ENST00000419253 SLIT2O94813 1529 aa17.39■□□□□ 0.37
TTC28-AS1-203ENST00000419253 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.37
TTC28-AS1-203ENST00000419253 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
TTC28-AS1-203ENST00000419253 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
TTC28-AS1-203ENST00000419253 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
TTC28-AS1-203ENST00000419253 TESK2Q96S53 571 aa17.38■□□□□ 0.37
TTC28-AS1-203ENST00000419253 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
TTC28-AS1-203ENST00000419253 PLCH1Q4KWH8 1693 aa17.37■□□□□ 0.37
TTC28-AS1-203ENST00000419253 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.37■□□□□ 0.37
TTC28-AS1-203ENST00000419253 NWD2Q9ULI1 1742 aa17.37■□□□□ 0.37
TTC28-AS1-203ENST00000419253 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
TTC28-AS1-203ENST00000419253 VPS72Q15906 364 aa17.35■□□□□ 0.37
TTC28-AS1-203ENST00000419253 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
TTC28-AS1-203ENST00000419253 ZBTB7CA1YPR0 619 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 GCP02774 474 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 EVA1CP58658 441 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 NINLQ9Y2I6 1382 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 CRYBG1Q9Y4K1 1723 aa17.34■□□□□ 0.37
TTC28-AS1-203ENST00000419253 RGS12O14924 1447 aa17.33■□□□□ 0.36
TTC28-AS1-203ENST00000419253 USP19O94966 1318 aa17.33■□□□□ 0.36
TTC28-AS1-203ENST00000419253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.36
TTC28-AS1-203ENST00000419253 SSH2Q76I76 1423 aa17.32■□□□□ 0.36
TTC28-AS1-203ENST00000419253 A0A0G2JS52 829 aa17.32■□□□□ 0.36
TTC28-AS1-203ENST00000419253 MYT1Q01538 1121 aa17.32■□□□□ 0.36
TTC28-AS1-203ENST00000419253 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
TTC28-AS1-203ENST00000419253 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.368e-7■■■■■ 28.7
TTC28-AS1-203ENST00000419253 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
TTC28-AS1-203ENST00000419253 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
TTC28-AS1-203ENST00000419253 CPDO75976 1380 aa17.29■□□□□ 0.36
TTC28-AS1-203ENST00000419253 NRKQ7Z2Y5 1582 aa17.29■□□□□ 0.36
TTC28-AS1-203ENST00000419253 SOX12O15370 315 aa17.29■□□□□ 0.36
TTC28-AS1-203ENST00000419253 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
TTC28-AS1-203ENST00000419253 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
TTC28-AS1-203ENST00000419253 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
TTC28-AS1-203ENST00000419253 NRAPQ86VF7 1730 aa17.27■□□□□ 0.36
TTC28-AS1-203ENST00000419253 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
TTC28-AS1-203ENST00000419253 GLI3P10071 1580 aa17.27■□□□□ 0.35
TTC28-AS1-203ENST00000419253 CD163L1Q9NR16 1453 aa17.26■□□□□ 0.35
TTC28-AS1-203ENST00000419253 NME9Q86XW9 330 aa17.26■□□□□ 0.35
TTC28-AS1-203ENST00000419253 SEPT12Q8IYM1 358 aa17.26■□□□□ 0.35
TTC28-AS1-203ENST00000419253 SLIT3O75094 1523 aa17.26■□□□□ 0.35
TTC28-AS1-203ENST00000419253 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
TTC28-AS1-203ENST00000419253 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
TTC28-AS1-203ENST00000419253 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
TTC28-AS1-203ENST00000419253 SPATA31A5Q5VU36 1347 aa17.24■□□□□ 0.35
TTC28-AS1-203ENST00000419253 SPATA31A7Q8IWB4 1347 aa17.24■□□□□ 0.35
TTC28-AS1-203ENST00000419253 HSPA5P11021 654 aaKnown RBP17.24■□□□□ 0.35
TTC28-AS1-203ENST00000419253 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
TTC28-AS1-203ENST00000419253 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
TTC28-AS1-203ENST00000419253 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
TTC28-AS1-203ENST00000419253 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
TTC28-AS1-203ENST00000419253 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
TTC28-AS1-203ENST00000419253 COG3Q96JB2 828 aa17.22■□□□□ 0.35
TTC28-AS1-203ENST00000419253 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
TTC28-AS1-203ENST00000419253 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
TTC28-AS1-203ENST00000419253 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
TTC28-AS1-203ENST00000419253 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
TTC28-AS1-203ENST00000419253 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
TTC28-AS1-203ENST00000419253 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
TTC28-AS1-203ENST00000419253 TOM1L2Q6ZVM7 507 aa17.19■□□□□ 0.34
TTC28-AS1-203ENST00000419253 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
TTC28-AS1-203ENST00000419253 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
TTC28-AS1-203ENST00000419253 THRAP3Q9Y2W1 955 aaKnown RBP17.18■□□□□ 0.34
TTC28-AS1-203ENST00000419253 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms