RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 CHD4Q14839 1912 aa17.86■□□□□ 0.45
DDX39B-205ENST00000419020 MYOM1P52179 1685 aa17.83■□□□□ 0.45
DDX39B-205ENST00000419020 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
DDX39B-205ENST00000419020 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
DDX39B-205ENST00000419020 CASZ1Q86V15 1759 aa17.83■□□□□ 0.44
DDX39B-205ENST00000419020 IFT172Q9UG01 1749 aa17.82■□□□□ 0.44
DDX39B-205ENST00000419020 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
DDX39B-205ENST00000419020 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
DDX39B-205ENST00000419020 PTGER2P43116 358 aa17.81■□□□□ 0.44
DDX39B-205ENST00000419020 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
DDX39B-205ENST00000419020 PDE3BQ13370 1112 aa17.8■□□□□ 0.44
DDX39B-205ENST00000419020 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
DDX39B-205ENST00000419020 SYT17Q9BSW7 474 aa17.8■□□□□ 0.44
DDX39B-205ENST00000419020 ANO8Q9HCE9 1232 aaPredicted RBP17.8■□□□□ 0.44
DDX39B-205ENST00000419020 ADGRF5Q8IZF2 1346 aa17.79■□□□□ 0.44
DDX39B-205ENST00000419020 TRPM3Q9HCF6 1732 aaPredicted RBP17.79■□□□□ 0.44
DDX39B-205ENST00000419020 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
DDX39B-205ENST00000419020 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
DDX39B-205ENST00000419020 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
DDX39B-205ENST00000419020 PRDM11Q9NQV5 511 aa17.79■□□□□ 0.44
DDX39B-205ENST00000419020 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
DDX39B-205ENST00000419020 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
DDX39B-205ENST00000419020 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
DDX39B-205ENST00000419020 CRYBG1Q9Y4K1 1723 aa17.77■□□□□ 0.44
DDX39B-205ENST00000419020 BARGINQ6ZT62 677 aa17.75■□□□□ 0.43
DDX39B-205ENST00000419020 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
DDX39B-205ENST00000419020 ITGAEP38570 1179 aa17.74■□□□□ 0.43
DDX39B-205ENST00000419020 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
DDX39B-205ENST00000419020 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
DDX39B-205ENST00000419020 KIAA0232Q92628 1395 aa17.73■□□□□ 0.43
DDX39B-205ENST00000419020 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
DDX39B-205ENST00000419020 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
DDX39B-205ENST00000419020 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
DDX39B-205ENST00000419020 PLSCR1O15162 318 aa17.71■□□□□ 0.43
DDX39B-205ENST00000419020 DLC1Q96QB1 1528 aa17.71■□□□□ 0.43
DDX39B-205ENST00000419020 GPRASP1Q5JY77 1395 aa17.7■□□□□ 0.42
DDX39B-205ENST00000419020 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
DDX39B-205ENST00000419020 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
DDX39B-205ENST00000419020 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
DDX39B-205ENST00000419020 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
DDX39B-205ENST00000419020 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX39B-205ENST00000419020 SGIP1Q9BQI5 828 aa17.68■□□□□ 0.42
DDX39B-205ENST00000419020 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
DDX39B-205ENST00000419020 PROM2Q8N271 834 aa17.67■□□□□ 0.42
DDX39B-205ENST00000419020 TCP11L2Q8N4U5 519 aa17.67■□□□□ 0.42
DDX39B-205ENST00000419020 PIK3C2GO75747 1445 aa17.66■□□□□ 0.42
DDX39B-205ENST00000419020 EVA1CP58658 441 aa17.66■□□□□ 0.42
DDX39B-205ENST00000419020 LARP1Q6PKG0 1096 aaKnown RBP17.66■□□□□ 0.42
DDX39B-205ENST00000419020 SHANK3Q9BYB0 1731 aa17.65■□□□□ 0.42
DDX39B-205ENST00000419020 PEAK1Q9H792 1746 aa17.65■□□□□ 0.42
DDX39B-205ENST00000419020 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
DDX39B-205ENST00000419020 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
DDX39B-205ENST00000419020 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
DDX39B-205ENST00000419020 PTF1AQ7RTS3 328 aa17.65■□□□□ 0.42
DDX39B-205ENST00000419020 MTFR1LQ9H019 292 aa17.65■□□□□ 0.42
DDX39B-205ENST00000419020 PRAM1Q96QH2 718 aa17.64■□□□□ 0.41
DDX39B-205ENST00000419020 ANKRD30BQ9BXX2 1392 aa17.64■□□□□ 0.41
DDX39B-205ENST00000419020 PARP4Q9UKK3 1724 aaKnown RBP17.64■□□□□ 0.41
DDX39B-205ENST00000419020 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.41
DDX39B-205ENST00000419020 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
DDX39B-205ENST00000419020 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
DDX39B-205ENST00000419020 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
DDX39B-205ENST00000419020 GPR162Q16538 588 aa17.63■□□□□ 0.41
DDX39B-205ENST00000419020 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
DDX39B-205ENST00000419020 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
DDX39B-205ENST00000419020 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
DDX39B-205ENST00000419020 ARXQ96QS3 562 aa17.62■□□□□ 0.41
DDX39B-205ENST00000419020 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
DDX39B-205ENST00000419020 THRAP3Q9Y2W1 955 aaKnown RBP17.61■□□□□ 0.41
DDX39B-205ENST00000419020 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
DDX39B-205ENST00000419020 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
DDX39B-205ENST00000419020 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
DDX39B-205ENST00000419020 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
DDX39B-205ENST00000419020 NGDNQ8NEJ9 315 aaKnown RBP17.58■□□□□ 0.4
DDX39B-205ENST00000419020 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
DDX39B-205ENST00000419020 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
DDX39B-205ENST00000419020 LMO7Q8WWI1 1683 aa17.57■□□□□ 0.4
DDX39B-205ENST00000419020 ATP7BP35670 1465 aa17.56■□□□□ 0.4
DDX39B-205ENST00000419020 HSPA6P17066 643 aa17.56■□□□□ 0.4
DDX39B-205ENST00000419020 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
DDX39B-205ENST00000419020 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
DDX39B-205ENST00000419020 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
DDX39B-205ENST00000419020 POGKQ9P215 609 aa17.56■□□□□ 0.4
DDX39B-205ENST00000419020 TULP4Q9NRJ4 1543 aa17.55■□□□□ 0.4
DDX39B-205ENST00000419020 LRRC37A3O60309 1634 aa17.54■□□□□ 0.4
DDX39B-205ENST00000419020 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
DDX39B-205ENST00000419020 PELP1Q8IZL8 1130 aaKnown RBP17.54■□□□□ 0.4
DDX39B-205ENST00000419020 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
DDX39B-205ENST00000419020 CPDO75976 1380 aa17.52■□□□□ 0.39
DDX39B-205ENST00000419020 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
DDX39B-205ENST00000419020 DDB1Q16531 1140 aa17.51■□□□□ 0.39
DDX39B-205ENST00000419020 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
DDX39B-205ENST00000419020 CRB1P82279 1406 aa17.5■□□□□ 0.39
DDX39B-205ENST00000419020 BCL9O00512 1426 aa17.49■□□□□ 0.39
DDX39B-205ENST00000419020 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
DDX39B-205ENST00000419020 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
DDX39B-205ENST00000419020 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
DDX39B-205ENST00000419020 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
DDX39B-205ENST00000419020 AATKQ6ZMQ8 1374 aa17.49■□□□□ 0.39
DDX39B-205ENST00000419020 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms