RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 ABCA3Q99758 1704 aa36.91■■■■□ 3.5
CAPN7-203ENST00000418994 RXRBP28702 533 aa36.91■■■■□ 3.5
CAPN7-203ENST00000418994 QTRT2Q9H974 415 aaKnown RBP36.91■■■■□ 3.5
CAPN7-203ENST00000418994 CABP1Q9NZU7 370 aa36.91■■■■□ 3.5
CAPN7-203ENST00000418994 ATAD2Q6PL18 1390 aa36.86■■■■□ 3.49
CAPN7-203ENST00000418994 TRPC5Q9UL62 973 aaPredicted RBP36.84■■■■□ 3.49
CAPN7-203ENST00000418994 BCL9LQ86UU0 1499 aa36.83■■■■□ 3.49
CAPN7-203ENST00000418994 RBM6P78332 1123 aaKnown RBP36.83■■■■□ 3.49
CAPN7-203ENST00000418994 CDK12Q9NYV4 1490 aaPredicted RBP36.81■■■■□ 3.48
CAPN7-203ENST00000418994 SLIT2O94813 1529 aa36.8■■■■□ 3.48
CAPN7-203ENST00000418994 BRD4O60885 1362 aaPredicted RBP36.8■■■■□ 3.48
CAPN7-203ENST00000418994 ATRNO75882 1429 aa36.8■■■■□ 3.48
CAPN7-203ENST00000418994 ST20-MTHFSA0A0A6YYL1 179 aa36.8■■■■□ 3.48
CAPN7-203ENST00000418994 CRYBG1Q9Y4K1 1723 aa36.79■■■■□ 3.48
CAPN7-203ENST00000418994 USP6P35125 1406 aa36.78■■■■□ 3.48
CAPN7-203ENST00000418994 ABTB2Q8N961 1025 aa36.77■■■■□ 3.48
CAPN7-203ENST00000418994 NUTM2GQ5VZR2 741 aa36.76■■■■□ 3.48
CAPN7-203ENST00000418994 UNC5CLQ8IV45 518 aa36.76■■■■□ 3.48
CAPN7-203ENST00000418994 TESK2Q96S53 571 aa36.76■■■■□ 3.48
CAPN7-203ENST00000418994 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.75■■■■□ 3.47
CAPN7-203ENST00000418994 USP47Q96K76 1375 aa36.75■■■■□ 3.47
CAPN7-203ENST00000418994 FAM83GA6ND36 823 aa36.74■■■■□ 3.47
CAPN7-203ENST00000418994 ZNF692Q9BU19 519 aaPredicted RBP36.73■■■■□ 3.47
CAPN7-203ENST00000418994 SLC24A1O60721 1099 aa36.72■■■■□ 3.47
CAPN7-203ENST00000418994 PLCH1Q4KWH8 1693 aa36.72■■■■□ 3.47
CAPN7-203ENST00000418994 PUS7Q96PZ0 661 aaKnown RBP36.71■■■■□ 3.47
CAPN7-203ENST00000418994 PHRF1Q9P1Y6 1649 aaKnown RBP36.7■■■■□ 3.47
CAPN7-203ENST00000418994 SSH2Q76I76 1423 aa36.7■■■■□ 3.47
CAPN7-203ENST00000418994 NWD2Q9ULI1 1742 aa36.7■■■■□ 3.47
CAPN7-203ENST00000418994 AKAP12Q02952 1782 aa36.69■■■■□ 3.46
CAPN7-203ENST00000418994 RGS12O14924 1447 aa36.68■■■■□ 3.46
CAPN7-203ENST00000418994 CPSF1Q10570 1443 aaKnown RBP36.68■■■■□ 3.46
CAPN7-203ENST00000418994 NLRP13Q86W25 1043 aa36.68■■■■□ 3.46
CAPN7-203ENST00000418994 COL14A1Q05707 1796 aaKnown RBP36.67■■■■□ 3.46
CAPN7-203ENST00000418994 USP19O94966 1318 aa36.66■■■■□ 3.46
CAPN7-203ENST00000418994 GJD4Q96KN9 370 aaPredicted RBP36.66■■■■□ 3.46
CAPN7-203ENST00000418994 TMC1Q8TDI8 760 aa36.65■■■■□ 3.46
CAPN7-203ENST00000418994 PRDM11Q9NQV5 511 aa36.65■■■■□ 3.46
CAPN7-203ENST00000418994 KTN1Q86UP2 1357 aaKnown RBP36.64■■■■□ 3.46
CAPN7-203ENST00000418994 KIAA0232Q92628 1395 aa36.63■■■■□ 3.45
CAPN7-203ENST00000418994 TTC21BQ7Z4L5 1316 aa36.62■■■■□ 3.45
CAPN7-203ENST00000418994 BTG4Q9NY30 223 aa36.62■■■■□ 3.45
CAPN7-203ENST00000418994 NRKQ7Z2Y5 1582 aa36.61■■■■□ 3.45
CAPN7-203ENST00000418994 VPS72Q15906 364 aa36.61■■■■□ 3.45
CAPN7-203ENST00000418994 NLRP6P59044 892 aa36.6■■■■□ 3.45
CAPN7-203ENST00000418994 ZC3H6P61129 1189 aaKnown RBP36.6■■■■□ 3.45
CAPN7-203ENST00000418994 SLC12A5Q9H2X9 1139 aa36.6■■■■□ 3.45
CAPN7-203ENST00000418994 TTC21AQ8NDW8 1320 aa36.59■■■■□ 3.45
CAPN7-203ENST00000418994 PIK3C2AO00443 1686 aa36.59■■■■□ 3.45
CAPN7-203ENST00000418994 CD163L1Q9NR16 1453 aa36.59■■■■□ 3.45
CAPN7-203ENST00000418994 NRAPQ86VF7 1730 aa36.59■■■■□ 3.45
CAPN7-203ENST00000418994 TMF1P82094 1093 aa36.58■■■■□ 3.45
CAPN7-203ENST00000418994 MON2Q7Z3U7 1717 aa36.58■■■■□ 3.45
CAPN7-203ENST00000418994 HDGFL2Q7Z4V5 671 aaPredicted RBP36.57■■■■□ 3.44
CAPN7-203ENST00000418994 GLI3P10071 1580 aa36.57■■■■□ 3.44
CAPN7-203ENST00000418994 NINLQ9Y2I6 1382 aa36.56■■■■□ 3.44
CAPN7-203ENST00000418994 GCP02774 474 aa36.56■■■■□ 3.44
CAPN7-203ENST00000418994 CPDO75976 1380 aa36.55■■■■□ 3.44
CAPN7-203ENST00000418994 CHRNA2Q15822 529 aa36.55■■■■□ 3.44
CAPN7-203ENST00000418994 TERF2IPQ9NYB0 399 aa36.55■■■■□ 3.44
CAPN7-203ENST00000418994 CCDC9Q9Y3X0 531 aaKnown RBP36.55■■■■□ 3.44
CAPN7-203ENST00000418994 SLIT3O75094 1523 aa36.53■■■■□ 3.44
CAPN7-203ENST00000418994 UPF1Q92900 1129 aaKnown RBP eCLIP36.5■■■■□ 3.43
CAPN7-203ENST00000418994 A0A1W2PP64 1363 aa36.5■■■■□ 3.43
CAPN7-203ENST00000418994 CDCA8Q53HL2 280 aa36.48■■■■□ 3.43
CAPN7-203ENST00000418994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.48■■■■□ 3.43
CAPN7-203ENST00000418994 EDC4Q6P2E9 1401 aaKnown RBP36.48■■■■□ 3.43
CAPN7-203ENST00000418994 LMO7Q8WWI1 1683 aa36.42■■■■□ 3.42
CAPN7-203ENST00000418994 SPATA31A5Q5VU36 1347 aa36.42■■■■□ 3.42
CAPN7-203ENST00000418994 SPATA31A7Q8IWB4 1347 aa36.42■■■■□ 3.42
CAPN7-203ENST00000418994 KCNH5Q8NCM2 988 aa36.42■■■■□ 3.42
CAPN7-203ENST00000418994 STRN4Q9NRL3 753 aa36.42■■■■□ 3.42
CAPN7-203ENST00000418994 USP31Q70CQ4 1352 aa36.41■■■■□ 3.42
CAPN7-203ENST00000418994 ONECUT3O60422 494 aaPredicted RBP36.41■■■■□ 3.42
CAPN7-203ENST00000418994 NME9Q86XW9 330 aa36.41■■■■□ 3.42
CAPN7-203ENST00000418994 CAMTA1Q9Y6Y1 1673 aa36.41■■■■□ 3.42
CAPN7-203ENST00000418994 EIF4G2P78344 907 aaKnown RBP eCLIP36.4■■■■□ 3.42
CAPN7-203ENST00000418994 ZBTB7CA1YPR0 619 aa36.39■■■■□ 3.42
CAPN7-203ENST00000418994 EVA1CP58658 441 aa36.39■■■■□ 3.42
CAPN7-203ENST00000418994 SEPT12Q8IYM1 358 aa36.39■■■■□ 3.42
CAPN7-203ENST00000418994 ZRANB1Q9UGI0 708 aa36.39■■■■□ 3.42
CAPN7-203ENST00000418994 ANKRD36BQ8N2N9 1353 aa36.39■■■■□ 3.42
CAPN7-203ENST00000418994 AATKQ6ZMQ8 1374 aa36.38■■■■□ 3.41
CAPN7-203ENST00000418994 USP54Q70EL1 1684 aa36.37■■■■□ 3.41
CAPN7-203ENST00000418994 SOX12O15370 315 aa36.36■■■■□ 3.41
CAPN7-203ENST00000418994 FAM98CQ17RN3 349 aaKnown RBP36.35■■■■□ 3.41
CAPN7-203ENST00000418994 SPATA31A1Q5TZJ5 1347 aa36.34■■■■□ 3.41
CAPN7-203ENST00000418994 HSPA5P11021 654 aaKnown RBP36.34■■■■□ 3.41
CAPN7-203ENST00000418994 NFAT5O94916 1531 aa36.34■■■■□ 3.41
CAPN7-203ENST00000418994 ARHGEF25Q86VW2 580 aa36.33■■■■□ 3.41
CAPN7-203ENST00000418994 COL5A2P05997 1499 aaPredicted RBP36.31■■■■□ 3.4
CAPN7-203ENST00000418994 A0A0G2JS52 829 aa36.31■■■■□ 3.4
CAPN7-203ENST00000418994 MYT1Q01538 1121 aa36.31■■■■□ 3.4
CAPN7-203ENST00000418994 BRWD3Q6RI45 1802 aa36.3■■■■□ 3.4
CAPN7-203ENST00000418994 LARP1Q6PKG0 1096 aaKnown RBP36.3■■■■□ 3.4
CAPN7-203ENST00000418994 COL18A1P39060 1754 aa36.29■■■■□ 3.4
CAPN7-203ENST00000418994 OVOS2A0A0J9YW53 1432 aa36.27■■■■□ 3.4
CAPN7-203ENST00000418994 OVOS2Q6IE36 1432 aa36.27■■■■□ 3.4
CAPN7-203ENST00000418994 MYOM1P52179 1685 aa36.26■■■■□ 3.39
CAPN7-203ENST00000418994 USP35Q9P2H5 1018 aa36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms