RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 FAM135BQ49AJ0 1406 aa9.6□□□□□ -0.87
CPS1-202ENST00000417946 HDGFP51858 240 aaKnown RBP9.6□□□□□ -0.87
CPS1-202ENST00000417946 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
CPS1-202ENST00000417946 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
CPS1-202ENST00000417946 TBX22Q9Y458 520 aa9.6□□□□□ -0.87
CPS1-202ENST00000417946 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
CPS1-202ENST00000417946 CENPJQ9HC77 1338 aaPredicted RBP9.59□□□□□ -0.87
CPS1-202ENST00000417946 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
CPS1-202ENST00000417946 HSPA2P54652 639 aa9.59□□□□□ -0.87
CPS1-202ENST00000417946 ANKLE2Q86XL3 938 aa9.59□□□□□ -0.87
CPS1-202ENST00000417946 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
CPS1-202ENST00000417946 STK26Q9P289 416 aa9.58□□□□□ -0.88
CPS1-202ENST00000417946 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
CPS1-202ENST00000417946 PYGBP11216 843 aa9.57□□□□□ -0.88
CPS1-202ENST00000417946 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
CPS1-202ENST00000417946 TOPAZ1Q8N9V7 1692 aa9.56□□□□□ -0.88
CPS1-202ENST00000417946 PLCG2P16885 1265 aa9.56□□□□□ -0.88
CPS1-202ENST00000417946 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
CPS1-202ENST00000417946 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
CPS1-202ENST00000417946 XIRP1Q702N8 1843 aaKnown RBP9.55□□□□□ -0.88
CPS1-202ENST00000417946 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
CPS1-202ENST00000417946 DIEXFQ68CQ4 756 aaKnown RBP9.55□□□□□ -0.88
CPS1-202ENST00000417946 WAPLQ7Z5K2 1190 aa9.55□□□□□ -0.88
CPS1-202ENST00000417946 KCNA6P17658 529 aa9.54□□□□□ -0.88
CPS1-202ENST00000417946 GOLGA2Q08379 1002 aa9.54□□□□□ -0.88
CPS1-202ENST00000417946 ZNF467Q7Z7K2 595 aaPredicted RBP9.54□□□□□ -0.88
CPS1-202ENST00000417946 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
CPS1-202ENST00000417946 POTEMA6NI47 508 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 TMF1P82094 1093 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 AMOTL2Q9Y2J4 779 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 CDC42BPGQ6DT37 1551 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
CPS1-202ENST00000417946 ATP7BP35670 1465 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
CPS1-202ENST00000417946 SAFB2Q14151 953 aaKnown RBP eCLIP9.52□□□□□ -0.89
CPS1-202ENST00000417946 BCANQ96GW7 911 aa9.52□□□□□ -0.89
CPS1-202ENST00000417946 PCDH10Q9P2E7 1040 aa9.52□□□□□ -0.89
CPS1-202ENST00000417946 RGPD8O14715 1765 aaPredicted RBP9.51□□□□□ -0.89
CPS1-202ENST00000417946 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
CPS1-202ENST00000417946 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
CPS1-202ENST00000417946 AKAP12Q02952 1782 aa9.5□□□□□ -0.89
CPS1-202ENST00000417946 ADGRL3Q9HAR2 1447 aa9.5□□□□□ -0.89
CPS1-202ENST00000417946 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
CPS1-202ENST00000417946 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
CPS1-202ENST00000417946 PUS7Q96PZ0 661 aaKnown RBP9.5□□□□□ -0.89
CPS1-202ENST00000417946 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
CPS1-202ENST00000417946 PRR36Q9H6K5 1346 aa9.5□□□□□ -0.89
CPS1-202ENST00000417946 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
CPS1-202ENST00000417946 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 POGKQ9P215 609 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 EVC2Q86UK5 1308 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
CPS1-202ENST00000417946 OCEL1Q9H607 264 aa9.48□□□□□ -0.89
CPS1-202ENST00000417946 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
CPS1-202ENST00000417946 WASLO00401 505 aaPredicted RBP9.47□□□□□ -0.89
CPS1-202ENST00000417946 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
CPS1-202ENST00000417946 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 POLR3GLQ9BT43 218 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CPS1-202ENST00000417946 LRRC7Q96NW7 1537 aa9.46□□□□□ -0.89
CPS1-202ENST00000417946 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.9
CPS1-202ENST00000417946 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
CPS1-202ENST00000417946 SLC12A5Q9H2X9 1139 aa9.46□□□□□ -0.9
CPS1-202ENST00000417946 PANK3Q9H999 370 aa9.46□□□□□ -0.9
CPS1-202ENST00000417946 NINLQ9Y2I6 1382 aa9.46□□□□□ -0.9
CPS1-202ENST00000417946 LTBP4Q8N2S1 1624 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
CPS1-202ENST00000417946 ZNF335Q9H4Z2 1342 aaPredicted RBP9.45□□□□□ -0.9
CPS1-202ENST00000417946 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 ANKRD36BQ8N2N9 1353 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 CPSF1Q10570 1443 aaKnown RBP9.45□□□□□ -0.9
CPS1-202ENST00000417946 ANKARQ7Z5J8 1434 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
CPS1-202ENST00000417946 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
CPS1-202ENST00000417946 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
CPS1-202ENST00000417946 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
CPS1-202ENST00000417946 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
CPS1-202ENST00000417946 PPIP5K1Q6PFW1 1433 aa9.44□□□□□ -0.9
CPS1-202ENST00000417946 NCOA3Q9Y6Q9 1424 aa9.44□□□□□ -0.9
CPS1-202ENST00000417946 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
CPS1-202ENST00000417946 NSD3Q9BZ95 1437 aa9.43□□□□□ -0.9
CPS1-202ENST00000417946 NPC1L1Q9UHC9 1359 aa9.43□□□□□ -0.9
CPS1-202ENST00000417946 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
CPS1-202ENST00000417946 IRX5P78411 483 aaPredicted RBP9.43□□□□□ -0.9
CPS1-202ENST00000417946 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
CPS1-202ENST00000417946 DCCP43146 1447 aa9.42□□□□□ -0.9
CPS1-202ENST00000417946 MST1RQ04912 1400 aa9.42□□□□□ -0.9
CPS1-202ENST00000417946 SSH2Q76I76 1423 aa9.42□□□□□ -0.9
CPS1-202ENST00000417946 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
CPS1-202ENST00000417946 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
CPS1-202ENST00000417946 POLR3AO14802 1390 aaPredicted RBP9.41□□□□□ -0.9
CPS1-202ENST00000417946 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
CPS1-202ENST00000417946 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms